RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-216ENST00000556066 ABCC3O15438 1527 aa10.42□□□□□ -0.74
PSEN1-216ENST00000556066 ABCC5O15440 1437 aa10.41□□□□□ -0.74
PSEN1-216ENST00000556066 KIF15Q9NS87 1388 aa10.41□□□□□ -0.74
PSEN1-216ENST00000556066 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
PSEN1-216ENST00000556066 MROH1Q8NDA8 1641 aa10.4□□□□□ -0.74
PSEN1-216ENST00000556066 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
PSEN1-216ENST00000556066 DAPK1P53355 1430 aa10.4□□□□□ -0.75
PSEN1-216ENST00000556066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
PSEN1-216ENST00000556066 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
PSEN1-216ENST00000556066 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
PSEN1-216ENST00000556066 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
PSEN1-216ENST00000556066 THEMISQ8N1K5 641 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-216ENST00000556066 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
PSEN1-216ENST00000556066 FAM50AQ14320 339 aaKnown RBP10.38□□□□□ -0.75
PSEN1-216ENST00000556066 ANKLE2Q86XL3 938 aa10.38□□□□□ -0.75
PSEN1-216ENST00000556066 NEURL4Q96JN8 1562 aa10.38□□□□□ -0.75
PSEN1-216ENST00000556066 ERVK-7P63135 1459 aa10.37□□□□□ -0.75
PSEN1-216ENST00000556066 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
PSEN1-216ENST00000556066 ERBINQ96RT1 1412 aa10.37□□□□□ -0.75
PSEN1-216ENST00000556066 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-216ENST00000556066 ANKRD30AQ9BXX3 1397 aa10.36□□□□□ -0.75
PSEN1-216ENST00000556066 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-216ENST00000556066 DEPDC5O75140 1603 aa10.35□□□□□ -0.75
PSEN1-216ENST00000556066 KANK1Q14678 1352 aa10.35□□□□□ -0.75
PSEN1-216ENST00000556066 UBR1Q8IWV7 1749 aa10.35□□□□□ -0.75
PSEN1-216ENST00000556066 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
PSEN1-216ENST00000556066 NPHP4O75161 1426 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-216ENST00000556066 TOM1O60784 492 aa10.33□□□□□ -0.76
PSEN1-216ENST00000556066 ALKQ9UM73 1620 aa10.32□□□□□ -0.76
PSEN1-216ENST00000556066 CPS1P31327 1500 aa10.32□□□□□ -0.76
PSEN1-216ENST00000556066 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
PSEN1-216ENST00000556066 MED14O60244 1454 aa10.31□□□□□ -0.76
PSEN1-216ENST00000556066 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
PSEN1-216ENST00000556066 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
PSEN1-216ENST00000556066 ARHGAP31Q2M1Z3 1444 aa10.31□□□□□ -0.76
PSEN1-216ENST00000556066 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
PSEN1-216ENST00000556066 ADGRL2O95490 1459 aa10.3□□□□□ -0.76
PSEN1-216ENST00000556066 STRCP1A6NGW2 1772 aa10.29□□□□□ -0.76
PSEN1-216ENST00000556066 TXNDC2Q86VQ3 553 aa10.29□□□□□ -0.76
PSEN1-216ENST00000556066 PLSCR2Q9NRY7 297 aa10.29□□□□□ -0.76
PSEN1-216ENST00000556066 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
PSEN1-216ENST00000556066 ANKRD50Q9ULJ7 1429 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 LTKP29376 864 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 PROM2Q8N271 834 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 RGS17Q9UGC6 210 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-216ENST00000556066 EID1Q9Y6B2 187 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 EFCAB6Q5THR3 1501 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 LMTK2Q8IWU2 1503 aa10.28□□□□□ -0.76
PSEN1-216ENST00000556066 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-216ENST00000556066 ITGAEP38570 1179 aa10.27□□□□□ -0.77
PSEN1-216ENST00000556066 ZRANB1Q9UGI0 708 aa10.27□□□□□ -0.77
PSEN1-216ENST00000556066 SLIT1O75093 1534 aa10.27□□□□□ -0.77
PSEN1-216ENST00000556066 SYNMO15061 1565 aa10.26□□□□□ -0.77
PSEN1-216ENST00000556066 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
PSEN1-216ENST00000556066 IDI1Q13907 227 aa10.26□□□□□ -0.77
PSEN1-216ENST00000556066 MYO5BQ9ULV0 1848 aa10.26□□□□□ -0.77
PSEN1-216ENST00000556066 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
PSEN1-216ENST00000556066 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
PSEN1-216ENST00000556066 TMEM2Q9UHN6 1383 aa10.25□□□□□ -0.77
PSEN1-216ENST00000556066 TET3O43151 1660 aa10.25□□□□□ -0.77
PSEN1-216ENST00000556066 GCC2Q8IWJ2 1684 aa10.25□□□□□ -0.77
PSEN1-216ENST00000556066 LRRC7Q96NW7 1537 aa10.24□□□□□ -0.77
PSEN1-216ENST00000556066 BCANQ96GW7 911 aa10.24□□□□□ -0.77
PSEN1-216ENST00000556066 NOS1P29475 1434 aa10.24□□□□□ -0.77
PSEN1-216ENST00000556066 ADGRB3O60242 1522 aa10.23□□□□□ -0.77
PSEN1-216ENST00000556066 UNC13BO14795 1591 aa10.23□□□□□ -0.77
PSEN1-216ENST00000556066 XIRP1Q702N8 1843 aaKnown RBP10.22□□□□□ -0.77
PSEN1-216ENST00000556066 SLC52A1Q9NWF4 448 aa10.22□□□□□ -0.77
PSEN1-216ENST00000556066 RPRD2Q5VT52 1461 aaKnown RBP10.22□□□□□ -0.77
PSEN1-216ENST00000556066 E9PCH4 1651 aa10.22□□□□□ -0.77
PSEN1-216ENST00000556066 CHGAP10645 457 aaKnown RBP10.21□□□□□ -0.77
PSEN1-216ENST00000556066 SLC26A8Q96RN1 970 aa10.21□□□□□ -0.77
PSEN1-216ENST00000556066 ROCK1Q13464 1354 aa10.21□□□□□ -0.78
PSEN1-216ENST00000556066 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
PSEN1-216ENST00000556066 NUP155O75694 1391 aa10.19□□□□□ -0.78
PSEN1-216ENST00000556066 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
PSEN1-216ENST00000556066 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
PSEN1-216ENST00000556066 POTEAQ6S8J7 498 aa10.18□□□□□ -0.78
PSEN1-216ENST00000556066 RIMS2Q9UQ26 1411 aa10.17□□□□□ -0.78
PSEN1-216ENST00000556066 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
PSEN1-216ENST00000556066 PROSER2Q86WR7 435 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-216ENST00000556066 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
PSEN1-216ENST00000556066 KCNA6P17658 529 aa10.16□□□□□ -0.78
PSEN1-216ENST00000556066 NUTM2DQ5VT03 806 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-216ENST00000556066 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
PSEN1-216ENST00000556066 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
PSEN1-216ENST00000556066 TMEM94Q12767 1356 aa10.15□□□□□ -0.78
PSEN1-216ENST00000556066 CHD2O14647 1828 aaKnown RBP10.15□□□□□ -0.78
PSEN1-216ENST00000556066 SPHKAPQ2M3C7 1700 aa10.15□□□□□ -0.78
PSEN1-216ENST00000556066 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
PSEN1-216ENST00000556066 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
PSEN1-216ENST00000556066 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.13□□□□□ -0.79
PSEN1-216ENST00000556066 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
PSEN1-216ENST00000556066 FAM135BQ49AJ0 1406 aa10.13□□□□□ -0.79
PSEN1-216ENST00000556066 NWD1Q149M9 1564 aa10.13□□□□□ -0.79
PSEN1-216ENST00000556066 RRBP1Q9P2E9 1410 aaKnown RBP10.12□□□□□ -0.79
PSEN1-216ENST00000556066 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
PSEN1-216ENST00000556066 ZNF326Q5BKZ1 582 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms