RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CCDC141Q6ZP82 1450 aa4.9□□□□□ -1.63
KTN1-217ENST00000554831 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.63
KTN1-217ENST00000554831 SLC12A5Q9H2X9 1139 aa4.9□□□□□ -1.63
KTN1-217ENST00000554831 CHMP5Q9NZZ3 219 aa4.9□□□□□ -1.63
KTN1-217ENST00000554831 HDGFP51858 240 aaKnown RBP4.9□□□□□ -1.63
KTN1-217ENST00000554831 PARD3Q8TEW0 1356 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 NUP153P49790 1475 aaKnown RBP4.89□□□□□ -1.63
KTN1-217ENST00000554831 GOLGA6L3A6NEY3 463 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 BCAR3O75815 825 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 PTMSP20962 102 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
KTN1-217ENST00000554831 FRAT2O75474 233 aaPredicted RBP4.89□□□□□ -1.63
KTN1-217ENST00000554831 WDR63Q8IWG1 891 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 SPRYD3Q8NCJ5 442 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 GZF1Q9H116 711 aaPredicted RBP4.89□□□□□ -1.63
KTN1-217ENST00000554831 RALGAPBQ86X10 1494 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 KIF16BQ96L93 1317 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 CT47B1P0C2W7 299 aaPredicted RBP4.89□□□□□ -1.63
KTN1-217ENST00000554831 LMOD3Q0VAK6 560 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 SCAPERQ9BY12 1400 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 ARHGEF11O15085 1522 aa4.89□□□□□ -1.63
KTN1-217ENST00000554831 C20orf194Q5TEA3 1177 aa4.88□□□□□ -1.63
KTN1-217ENST00000554831 TEX14Q8IWB6 1497 aa4.88□□□□□ -1.63
KTN1-217ENST00000554831 NINLQ9Y2I6 1382 aa4.88□□□□□ -1.63
KTN1-217ENST00000554831 ZNF608Q9ULD9 1512 aaPredicted RBP4.88□□□□□ -1.63
KTN1-217ENST00000554831 WWC1Q8IX03 1113 aa4.88□□□□□ -1.63
KTN1-217ENST00000554831 NAP1L5Q96NT1 182 aaPredicted RBP4.88□□□□□ -1.63
KTN1-217ENST00000554831 DIAPH1O60610 1272 aaKnown RBP4.87□□□□□ -1.63
KTN1-217ENST00000554831 UHRF1BP1Q6BDS2 1440 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 DDX11L8A8MPP1 907 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 C22orf23Q9BZE7 217 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 TMEM132EQ6IEE7 984 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 ARHGAP5Q13017 1502 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 PZPP20742 1482 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 RIPK4P57078 832 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 ZNF428Q96B54 188 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 PDZRN3Q9UPQ7 1066 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
KTN1-217ENST00000554831 HMMRO75330 724 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 CHMP4AQ9BY43 222 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 ATP10BO94823 1461 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 ELL2O00472 640 aaPredicted RBP4.86□□□□□ -1.63
KTN1-217ENST00000554831 API5Q9BZZ5 524 aaKnown RBP4.86□□□□□ -1.63
KTN1-217ENST00000554831 SKOR2Q2VWA4 1001 aaPredicted RBP4.86□□□□□ -1.63
KTN1-217ENST00000554831 ANKRD45Q5TZF3 282 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 IL27Q8NEV9 243 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 LNPKQ9C0E8 428 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 RSPH6AQ9H0K4 717 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 INSRP06213 1382 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 GGNBP2Q9H3C7 697 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
KTN1-217ENST00000554831 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 SLC52A1Q9NWF4 448 aa4.86□□□□□ -1.63
KTN1-217ENST00000554831 RARSP54136 660 aaKnown RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 ATF7IPQ6VMQ6 1270 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 EXOSC9Q06265 439 aaKnown RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 NUTM2DQ5VT03 806 aaPredicted RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 SKAP1Q86WV1 359 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 GPRASP1Q5JY77 1395 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 MINK1Q8N4C8 1332 aaPredicted RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 PTMAP06454 111 aaKnown RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 GNAI1P63096 354 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 NUP160Q12769 1436 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 RPGRIP1LQ68CZ1 1315 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 SAMD9Q5K651 1589 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 MCCP23508 829 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
KTN1-217ENST00000554831 BRPF3Q9ULD4 1205 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 ADGRL2O95490 1459 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 CTTNBP2Q8WZ74 1663 aa4.85□□□□□ -1.63
KTN1-217ENST00000554831 DISP3Q9P2K9 1392 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 WDR62O43379 1518 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 MSNP26038 577 aaKnown RBP4.84□□□□□ -1.63
KTN1-217ENST00000554831 DDX49Q9Y6V7 483 aaKnown RBP4.84□□□□□ -1.63
KTN1-217ENST00000554831 NPC1L1Q9UHC9 1359 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 ST18O60284 1047 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 MRE11P49959 708 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 STK31Q9BXU1 1019 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 NKTRP30414 1462 aaKnown RBP4.84□□□□□ -1.63
KTN1-217ENST00000554831 NCBP3Q53F19 620 aaKnown RBP4.84□□□□□ -1.63
KTN1-217ENST00000554831 APBB1O00213 710 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 MCM4P33991 863 aa4.84□□□□□ -1.63
KTN1-217ENST00000554831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.84□□□□□ -1.63
KTN1-217ENST00000554831 SCAF11Q99590 1463 aaKnown RBP4.84□□□□□ -1.64
KTN1-217ENST00000554831 REC8O95072 547 aa4.84□□□□□ -1.64
KTN1-217ENST00000554831 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.84□□□□□ -1.64
KTN1-217ENST00000554831 MAGI3Q5TCQ9 1506 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 TRAK2O60296 914 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 SHANK2Q9UPX8 1470 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 CABP2Q9NPB3 220 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 CIZ1Q9ULV3 898 aaPredicted RBP4.83□□□□□ -1.64
KTN1-217ENST00000554831 TMPOP42166 694 aaKnown RBP4.83□□□□□ -1.64
KTN1-217ENST00000554831 NUCB2P80303 420 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 DISP1Q96F81 1524 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 ADGRF5Q8IZF2 1346 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 MLECQ14165 292 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 TSR2Q969E8 191 aaKnown RBP4.83□□□□□ -1.64
KTN1-217ENST00000554831 COG3Q96JB2 828 aa4.83□□□□□ -1.64
KTN1-217ENST00000554831 HDAC5Q9UQL6 1122 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms