RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 NBPF6Q5VWK0 638 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 NYAP1Q6ZVC0 841 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 NBPF5PQ86XG9 351 aaPredicted RBP5.05□□□□□ -1.6
LRFN5-204ENST00000554171 NBPF4Q96M43 638 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 E9PSI1 815 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 KCNV2Q8TDN2 545 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 KLHL33A6NCF5 533 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 ZNF662Q6ZS27 426 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 NLRP13Q86W25 1043 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 SYNPO2Q9UMS6 1093 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 SMC3Q9UQE7 1217 aa5.04□□□□□ -1.6
LRFN5-204ENST00000554171 SMARCA5O60264 1052 aaPredicted RBP5.03□□□□□ -1.6
LRFN5-204ENST00000554171 NBR1Q14596 966 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 GPBP1L1Q9HC44 474 aaPredicted RBP5.03□□□□□ -1.6
LRFN5-204ENST00000554171 KIF16BQ96L93 1317 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 RIPK4P57078 832 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 UBA5Q9GZZ9 404 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 EPB41L2O43491 1005 aaKnown RBP5.03□□□□□ -1.6
LRFN5-204ENST00000554171 CT47B1P0C2W7 299 aaPredicted RBP5.03□□□□□ -1.6
LRFN5-204ENST00000554171 BDNFP23560 247 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 GYS2P54840 703 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 CASC1Q6TDU7 716 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 CCDC82Q8N4S0 544 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 DNAJC5BQ9UF47 199 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 TSGA10IPQ3SY00 556 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 GAS2L2Q8NHY3 880 aa5.03□□□□□ -1.6
LRFN5-204ENST00000554171 PNISRQ8TF01 805 aaKnown RBP5.03□□□□□ -1.6
LRFN5-204ENST00000554171 RAD54L2Q9Y4B4 1467 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 CCER2I3L3R5 266 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 ERBB3P21860 1342 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 CCT2P78371 535 aaKnown RBP5.02□□□□□ -1.61
LRFN5-204ENST00000554171 MLECQ14165 292 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 PEG3Q9GZU2 1588 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 HOXD11P31277 338 aaPredicted RBP5.02□□□□□ -1.61
LRFN5-204ENST00000554171 PUS10Q3MIT2 529 aaKnown RBP5.02□□□□□ -1.61
LRFN5-204ENST00000554171 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 SWT1Q5T5J6 900 aaKnown RBP5.02□□□□□ -1.61
LRFN5-204ENST00000554171 GPATCH3Q96I76 525 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 ARPC5LQ9BPX5 153 aa5.02□□□□□ -1.61
LRFN5-204ENST00000554171 MIER1Q8N108 512 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 ANP32BQ92688 251 aaKnown RBP5.01□□□□□ -1.61
LRFN5-204ENST00000554171 AGAP3Q96P47 875 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 STK24Q9Y6E0 443 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 ALDH1B1P30837 517 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 SF3B2Q13435 895 aaKnown RBP5.01□□□□□ -1.61
LRFN5-204ENST00000554171 ZNF280DQ6N043 979 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 RANBP17Q9H2T7 1088 aaKnown RBP5.01□□□□□ -1.61
LRFN5-204ENST00000554171 KIAA1522Q9P206 1035 aaPredicted RBP5.01□□□□□ -1.61
LRFN5-204ENST00000554171 SUN2Q9UH99 717 aa5.01□□□□□ -1.61
LRFN5-204ENST00000554171 KCNN1Q92952 543 aa5□□□□□ -1.61
LRFN5-204ENST00000554171 SLC4A2P04920 1241 aa5□□□□□ -1.61
LRFN5-204ENST00000554171 ZNF513Q8N8E2 541 aaPredicted RBP5□□□□□ -1.61
LRFN5-204ENST00000554171 NAT1P18440 290 aa5□□□□□ -1.61
LRFN5-204ENST00000554171 SMC5Q8IY18 1101 aa5□□□□□ -1.61
LRFN5-204ENST00000554171 ZHX1Q9UKY1 873 aaPredicted RBP5□□□□□ -1.61
LRFN5-204ENST00000554171 IPO8O15397 1037 aaKnown RBP5□□□□□ -1.61
LRFN5-204ENST00000554171 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
LRFN5-204ENST00000554171 APBB1O00213 710 aa4.99□□□□□ -1.61
LRFN5-204ENST00000554171 RGL2O15211 777 aa4.99□□□□□ -1.61
LRFN5-204ENST00000554171 TMCO4Q5TGY1 634 aa4.99□□□□□ -1.61
LRFN5-204ENST00000554171 GET4Q7L5D6 327 aaPredicted RBP4.99□□□□□ -1.61
LRFN5-204ENST00000554171 GOLIM4O00461 696 aa4.99□□□□□ -1.61
LRFN5-204ENST00000554171 HSP90AA1P07900 732 aaKnown RBP4.99□□□□□ -1.61
LRFN5-204ENST00000554171 NOP2P46087 812 aaKnown RBP4.99□□□□□ -1.61
LRFN5-204ENST00000554171 CC2D1BQ5T0F9 858 aaKnown RBP4.99□□□□□ -1.61
LRFN5-204ENST00000554171 CDCA7Q9BWT1 371 aaPredicted RBP4.99□□□□□ -1.61
LRFN5-204ENST00000554171 EIF5P55010 431 aaKnown RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 CDC37Q16543 378 aaPredicted RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 C4orf46Q504U0 113 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 KCNV1Q6PIU1 500 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 P3H3Q8IVL6 736 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 MAP4K4O95819 1239 aaPredicted RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 POLD1P28340 1107 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 MKRN3Q13064 507 aaKnown RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 ANKRD13AQ8IZ07 590 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 TERF1P54274 439 aa4.98□□□□□ -1.61
LRFN5-204ENST00000554171 PROCA1Q8NCQ7 364 aaPredicted RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 GZF1Q9H116 711 aaPredicted RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 RBM27Q9P2N5 1060 aaKnown RBP4.98□□□□□ -1.61
LRFN5-204ENST00000554171 SLC27A2O14975 620 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 GIGYF1O75420 1035 aaPredicted RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 KDM4CQ9H3R0 1056 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 MYH16Q9H6N6 1097 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 HDAC1Q13547 482 aaPredicted RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 IFNLR1Q8IU57 520 aaPredicted RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 SENP7Q9BQF6 1050 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 CEP83Q9Y592 693 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 EIF4G1Q04637 1599 aaKnown RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 DHX16O60231 1041 aaKnown RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 PMM1Q92871 262 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 JADE2Q9NQC1 790 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 PSME1Q06323 249 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 PTK7Q13308 1070 aa4.97□□□□□ -1.61
LRFN5-204ENST00000554171 HIRIP3Q9BW71 556 aaPredicted RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 GTPBP4Q9BZE4 634 aaKnown RBP4.97□□□□□ -1.61
LRFN5-204ENST00000554171 EVA1CP58658 441 aa4.96□□□□□ -1.61
LRFN5-204ENST00000554171 MICALL1Q8N3F8 863 aa4.96□□□□□ -1.61
LRFN5-204ENST00000554171 FAM13BQ9NYF5 915 aa4.96□□□□□ -1.61
LRFN5-204ENST00000554171 NRDCO43847 1150 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms