RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
CFAP54-204ENST00000553778 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
CFAP54-204ENST00000553778 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
CFAP54-204ENST00000553778 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
CFAP54-204ENST00000553778 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
CFAP54-204ENST00000553778 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
CFAP54-204ENST00000553778 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.24
CFAP54-204ENST00000553778 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.25
CFAP54-204ENST00000553778 LMTK3Q96Q04 1460 aa13.52□□□□□ -0.25
CFAP54-204ENST00000553778 HSPA2P54652 639 aa13.51□□□□□ -0.25
CFAP54-204ENST00000553778 IDI1Q13907 227 aa13.51□□□□□ -0.25
CFAP54-204ENST00000553778 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CFAP54-204ENST00000553778 NOS1P29475 1434 aa13.51□□□□□ -0.25
CFAP54-204ENST00000553778 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
CFAP54-204ENST00000553778 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
CFAP54-204ENST00000553778 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
CFAP54-204ENST00000553778 E9PCH4 1651 aa13.5□□□□□ -0.25
CFAP54-204ENST00000553778 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
CFAP54-204ENST00000553778 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
CFAP54-204ENST00000553778 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
CFAP54-204ENST00000553778 FOXD1Q16676 465 aa13.49□□□□□ -0.25
CFAP54-204ENST00000553778 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
CFAP54-204ENST00000553778 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
CFAP54-204ENST00000553778 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CFAP54-204ENST00000553778 PTPRTO14522 1441 aa13.46□□□□□ -0.25
CFAP54-204ENST00000553778 UGGT1Q9NYU2 1555 aa13.46□□□□□ -0.25
CFAP54-204ENST00000553778 SYNMO15061 1565 aa13.45□□□□□ -0.26
CFAP54-204ENST00000553778 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
CFAP54-204ENST00000553778 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
CFAP54-204ENST00000553778 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
CFAP54-204ENST00000553778 GLIPR1L2Q4G1C9 344 aa13.44□□□□□ -0.26
CFAP54-204ENST00000553778 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
CFAP54-204ENST00000553778 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
CFAP54-204ENST00000553778 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
CFAP54-204ENST00000553778 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
CFAP54-204ENST00000553778 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
CFAP54-204ENST00000553778 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
CFAP54-204ENST00000553778 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
CFAP54-204ENST00000553778 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
CFAP54-204ENST00000553778 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
CFAP54-204ENST00000553778 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
CFAP54-204ENST00000553778 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
CFAP54-204ENST00000553778 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
CFAP54-204ENST00000553778 TRPM2O94759 1503 aa13.4□□□□□ -0.26
CFAP54-204ENST00000553778 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.27
CFAP54-204ENST00000553778 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
CFAP54-204ENST00000553778 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
CFAP54-204ENST00000553778 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
CFAP54-204ENST00000553778 NEFMP07197 916 aa13.38□□□□□ -0.27
CFAP54-204ENST00000553778 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
CFAP54-204ENST00000553778 ADGRB3O60242 1522 aa13.37□□□□□ -0.27
CFAP54-204ENST00000553778 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
CFAP54-204ENST00000553778 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
CFAP54-204ENST00000553778 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
CFAP54-204ENST00000553778 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
CFAP54-204ENST00000553778 LTKP29376 864 aa13.36□□□□□ -0.27
CFAP54-204ENST00000553778 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
CFAP54-204ENST00000553778 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
CFAP54-204ENST00000553778 SLIT1O75093 1534 aa13.35□□□□□ -0.27
CFAP54-204ENST00000553778 GSE1Q14687 1217 aa13.35□□□□□ -0.27
CFAP54-204ENST00000553778 ARHGAP23Q9P227 1491 aa13.35□□□□□ -0.27
CFAP54-204ENST00000553778 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
CFAP54-204ENST00000553778 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
CFAP54-204ENST00000553778 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
CFAP54-204ENST00000553778 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
CFAP54-204ENST00000553778 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
CFAP54-204ENST00000553778 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
CFAP54-204ENST00000553778 KIF1BO60333 1816 aa13.33□□□□□ -0.28
CFAP54-204ENST00000553778 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
CFAP54-204ENST00000553778 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
CFAP54-204ENST00000553778 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
CFAP54-204ENST00000553778 MED14O60244 1454 aa13.31□□□□□ -0.28
CFAP54-204ENST00000553778 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
CFAP54-204ENST00000553778 MYO5BQ9ULV0 1848 aa13.3□□□□□ -0.28
CFAP54-204ENST00000553778 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
CFAP54-204ENST00000553778 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
CFAP54-204ENST00000553778 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
CFAP54-204ENST00000553778 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
CFAP54-204ENST00000553778 SPATA31E1Q6ZUB1 1445 aa13.29□□□□□ -0.28
CFAP54-204ENST00000553778 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
CFAP54-204ENST00000553778 NEURL4Q96JN8 1562 aa13.27□□□□□ -0.28
CFAP54-204ENST00000553778 MS4A1P11836 297 aa13.27□□□□□ -0.28
CFAP54-204ENST00000553778 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.29
CFAP54-204ENST00000553778 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
CFAP54-204ENST00000553778 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
CFAP54-204ENST00000553778 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
CFAP54-204ENST00000553778 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
CFAP54-204ENST00000553778 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
CFAP54-204ENST00000553778 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
CFAP54-204ENST00000553778 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
CFAP54-204ENST00000553778 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
CFAP54-204ENST00000553778 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
CFAP54-204ENST00000553778 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
CFAP54-204ENST00000553778 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
CFAP54-204ENST00000553778 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
CFAP54-204ENST00000553778 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
CFAP54-204ENST00000553778 ZMYND15Q9H091 742 aa13.21□□□□□ -0.29
CFAP54-204ENST00000553778 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
CFAP54-204ENST00000553778 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
CFAP54-204ENST00000553778 PPLO60437 1756 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms