RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CDC42BPAQ5VT25 1732 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 ZCCHC11Q5TAX3 1644 aaKnown RBP10.44□□□□□ -0.74
ATXN3-221ENST00000553498 KIF15Q9NS87 1388 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
ATXN3-221ENST00000553498 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
ATXN3-221ENST00000553498 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
ATXN3-221ENST00000553498 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATXN3-221ENST00000553498 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
ATXN3-221ENST00000553498 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
ATXN3-221ENST00000553498 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-221ENST00000553498 RTEL1-TNFRSF6BF6WH68 1400 aa10.42□□□□□ -0.74
ATXN3-221ENST00000553498 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
ATXN3-221ENST00000553498 TTC37Q6PGP7 1564 aa10.42□□□□□ -0.74
ATXN3-221ENST00000553498 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
ATXN3-221ENST00000553498 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
ATXN3-221ENST00000553498 RPRD2Q5VT52 1461 aaKnown RBP10.41□□□□□ -0.74
ATXN3-221ENST00000553498 PZPP20742 1482 aa10.4□□□□□ -0.74
ATXN3-221ENST00000553498 ERBINQ96RT1 1412 aa10.4□□□□□ -0.75
ATXN3-221ENST00000553498 KDM6BO15054 1643 aa10.4□□□□□ -0.75
ATXN3-221ENST00000553498 SYCP2Q9BX26 1530 aa10.39□□□□□ -0.75
ATXN3-221ENST00000553498 SCUBE2Q9NQ36 999 aa10.39□□□□□ -0.75
ATXN3-221ENST00000553498 ASXL2Q76L83 1435 aa10.39□□□□□ -0.75
ATXN3-221ENST00000553498 PLXNC1O60486 1568 aa10.39□□□□□ -0.75
ATXN3-221ENST00000553498 NUP155O75694 1391 aa10.39□□□□□ -0.75
ATXN3-221ENST00000553498 ABCC1P33527 1531 aa10.38□□□□□ -0.75
ATXN3-221ENST00000553498 L3MBTL3Q96JM7 780 aaPredicted RBP10.38□□□□□ -0.75
ATXN3-221ENST00000553498 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
ATXN3-221ENST00000553498 DUOX2Q9NRD8 1548 aa10.38□□□□□ -0.75
ATXN3-221ENST00000553498 NLRP6P59044 892 aa10.37□□□□□ -0.75
ATXN3-221ENST00000553498 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-221ENST00000553498 TMEM121BQ9BXQ6 578 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-221ENST00000553498 CDC42BPBQ9Y5S2 1711 aa10.37□□□□□ -0.75
ATXN3-221ENST00000553498 ABCA9Q8IUA7 1624 aa10.36□□□□□ -0.75
ATXN3-221ENST00000553498 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
ATXN3-221ENST00000553498 FANCAO15360 1455 aa10.35□□□□□ -0.75
ATXN3-221ENST00000553498 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
ATXN3-221ENST00000553498 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
ATXN3-221ENST00000553498 MAGI2Q86UL8 1455 aa10.32□□□□□ -0.76
ATXN3-221ENST00000553498 TEX14Q8IWB6 1497 aa10.32□□□□□ -0.76
ATXN3-221ENST00000553498 POTEMA6NI47 508 aa10.32□□□□□ -0.76
ATXN3-221ENST00000553498 L3MBTL2Q969R5 705 aa10.32□□□□□ -0.76
ATXN3-221ENST00000553498 TRAPPC8Q9Y2L5 1435 aa10.32□□□□□ -0.76
ATXN3-221ENST00000553498 UNC13BO14795 1591 aa10.31□□□□□ -0.76
ATXN3-221ENST00000553498 ATP10AO60312 1499 aa10.31□□□□□ -0.76
ATXN3-221ENST00000553498 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 FAM135AQ9P2D6 1515 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 CD109Q6YHK3 1445 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 CFAP74Q9C0B2 1584 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
ATXN3-221ENST00000553498 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
ATXN3-221ENST00000553498 PPP1R37O75864 691 aa10.29□□□□□ -0.76
ATXN3-221ENST00000553498 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-221ENST00000553498 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATXN3-221ENST00000553498 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
ATXN3-221ENST00000553498 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
ATXN3-221ENST00000553498 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
ATXN3-221ENST00000553498 NEO1Q92859 1461 aa10.29□□□□□ -0.76
ATXN3-221ENST00000553498 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
ATXN3-221ENST00000553498 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
ATXN3-221ENST00000553498 KANK1Q14678 1352 aa10.27□□□□□ -0.76
ATXN3-221ENST00000553498 DHX29Q7Z478 1369 aaKnown RBP10.27□□□□□ -0.76
ATXN3-221ENST00000553498 AFAP1Q8N556 730 aa10.27□□□□□ -0.77
ATXN3-221ENST00000553498 IQGAP3Q86VI3 1631 aa10.26□□□□□ -0.77
ATXN3-221ENST00000553498 CCDC144AA2RUR9 1427 aa10.26□□□□□ -0.77
ATXN3-221ENST00000553498 MLH3Q9UHC1 1453 aa10.26□□□□□ -0.77
ATXN3-221ENST00000553498 C3orf67Q6ZVT6 689 aa10.26□□□□□ -0.77
ATXN3-221ENST00000553498 ATP7AQ04656 1500 aa10.26□□□□□ -0.77
ATXN3-221ENST00000553498 INO80Q9ULG1 1556 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-221ENST00000553498 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
ATXN3-221ENST00000553498 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-221ENST00000553498 POGZQ7Z3K3 1410 aa10.24□□□□□ -0.77
ATXN3-221ENST00000553498 GLI2P10070 1586 aa10.24□□□□□ -0.77
ATXN3-221ENST00000553498 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
ATXN3-221ENST00000553498 G3V3G9 751 aa10.23□□□□□ -0.77
ATXN3-221ENST00000553498 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-221ENST00000553498 KDM5CP41229 1560 aa10.22□□□□□ -0.77
ATXN3-221ENST00000553498 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
ATXN3-221ENST00000553498 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
ATXN3-221ENST00000553498 NBPF8Q3BBV2 869 aa10.21□□□□□ -0.77
ATXN3-221ENST00000553498 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-221ENST00000553498 PTPRTO14522 1441 aa10.21□□□□□ -0.78
ATXN3-221ENST00000553498 RALGAPBQ86X10 1494 aa10.21□□□□□ -0.78
ATXN3-221ENST00000553498 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 DEPDC5O75140 1603 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 LMTK2Q8IWU2 1503 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 VWDEQ8N2E2 1590 aa10.2□□□□□ -0.78
ATXN3-221ENST00000553498 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-221ENST00000553498 A2MP01023 1474 aa10.19□□□□□ -0.78
ATXN3-221ENST00000553498 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
ATXN3-221ENST00000553498 CYB5RLQ6IPT4 315 aa10.19□□□□□ -0.78
ATXN3-221ENST00000553498 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
ATXN3-221ENST00000553498 ANP32CO43423 234 aa10.18□□□□□ -0.78
ATXN3-221ENST00000553498 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms