RNA–Protein interactions for RNA: ENST00000552624.5

SYT1-211, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-211ENST00000552624 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
SYT1-211ENST00000552624 GGT6Q6P531 493 aa12.9□□□□□ -0.34
SYT1-211ENST00000552624 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
SYT1-211ENST00000552624 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
SYT1-211ENST00000552624 PLXNC1O60486 1568 aa12.9□□□□□ -0.35
SYT1-211ENST00000552624 ATP7AQ04656 1500 aa12.89□□□□□ -0.35
SYT1-211ENST00000552624 A2MP01023 1474 aa12.89□□□□□ -0.35
SYT1-211ENST00000552624 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
SYT1-211ENST00000552624 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
SYT1-211ENST00000552624 CPS1P31327 1500 aa12.88□□□□□ -0.35
SYT1-211ENST00000552624 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
SYT1-211ENST00000552624 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
SYT1-211ENST00000552624 POLR1AO95602 1720 aaPredicted RBP12.87□□□□□ -0.35
SYT1-211ENST00000552624 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
SYT1-211ENST00000552624 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
SYT1-211ENST00000552624 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
SYT1-211ENST00000552624 ALKQ9UM73 1620 aa12.86□□□□□ -0.35
SYT1-211ENST00000552624 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
SYT1-211ENST00000552624 CASKIN1Q8WXD9 1431 aa12.84□□□□□ -0.35
SYT1-211ENST00000552624 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
SYT1-211ENST00000552624 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
SYT1-211ENST00000552624 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
SYT1-211ENST00000552624 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
SYT1-211ENST00000552624 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
SYT1-211ENST00000552624 RYDENQ9NUL5 291 aaKnown RBP12.81□□□□□ -0.36
SYT1-211ENST00000552624 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
SYT1-211ENST00000552624 TNRQ92752 1358 aa12.81□□□□□ -0.36
SYT1-211ENST00000552624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYT1-211ENST00000552624 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
SYT1-211ENST00000552624 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
SYT1-211ENST00000552624 TIE1P35590 1138 aa12.8□□□□□ -0.36
SYT1-211ENST00000552624 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
SYT1-211ENST00000552624 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
SYT1-211ENST00000552624 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
SYT1-211ENST00000552624 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
SYT1-211ENST00000552624 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
SYT1-211ENST00000552624 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
SYT1-211ENST00000552624 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.36
SYT1-211ENST00000552624 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
SYT1-211ENST00000552624 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.37
SYT1-211ENST00000552624 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
SYT1-211ENST00000552624 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
SYT1-211ENST00000552624 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
SYT1-211ENST00000552624 PZPP20742 1482 aa12.76□□□□□ -0.37
SYT1-211ENST00000552624 MED14O60244 1454 aa12.75□□□□□ -0.37
SYT1-211ENST00000552624 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
SYT1-211ENST00000552624 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
SYT1-211ENST00000552624 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
SYT1-211ENST00000552624 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 KIF3BO15066 747 aa12.74□□□□□ -0.37
SYT1-211ENST00000552624 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
SYT1-211ENST00000552624 KDM5DQ9BY66 1539 aa12.73□□□□□ -0.37
SYT1-211ENST00000552624 GABBR2O75899 941 aa12.73□□□□□ -0.37
SYT1-211ENST00000552624 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
SYT1-211ENST00000552624 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
SYT1-211ENST00000552624 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
SYT1-211ENST00000552624 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
SYT1-211ENST00000552624 SOX12O15370 315 aa12.72□□□□□ -0.37
SYT1-211ENST00000552624 NLRP1Q9C000 1473 aa12.72□□□□□ -0.37
SYT1-211ENST00000552624 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
SYT1-211ENST00000552624 SYNMO15061 1565 aa12.71□□□□□ -0.37
SYT1-211ENST00000552624 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.38
SYT1-211ENST00000552624 TIAM1Q13009 1591 aa12.7□□□□□ -0.38
SYT1-211ENST00000552624 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
SYT1-211ENST00000552624 MTUS2Q5JR59 1369 aa12.69□□□□□ -0.38
SYT1-211ENST00000552624 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
SYT1-211ENST00000552624 NLRP6P59044 892 aa12.68□□□□□ -0.38
SYT1-211ENST00000552624 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
SYT1-211ENST00000552624 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
SYT1-211ENST00000552624 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
SYT1-211ENST00000552624 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.38
SYT1-211ENST00000552624 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SYT1-211ENST00000552624 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
SYT1-211ENST00000552624 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
SYT1-211ENST00000552624 CCDC141Q6ZP82 1450 aa12.65□□□□□ -0.38
SYT1-211ENST00000552624 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
SYT1-211ENST00000552624 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
SYT1-211ENST00000552624 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
SYT1-211ENST00000552624 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
SYT1-211ENST00000552624 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
SYT1-211ENST00000552624 ERVK-7P63135 1459 aa12.62□□□□□ -0.39
SYT1-211ENST00000552624 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
SYT1-211ENST00000552624 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
SYT1-211ENST00000552624 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
SYT1-211ENST00000552624 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
SYT1-211ENST00000552624 SCAF11Q99590 1463 aaKnown RBP12.61□□□□□ -0.39
SYT1-211ENST00000552624 LTKP29376 864 aa12.61□□□□□ -0.39
SYT1-211ENST00000552624 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
SYT1-211ENST00000552624 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
SYT1-211ENST00000552624 ABCC3O15438 1527 aa12.61□□□□□ -0.39
SYT1-211ENST00000552624 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
SYT1-211ENST00000552624 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
SYT1-211ENST00000552624 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
SYT1-211ENST00000552624 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
SYT1-211ENST00000552624 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
SYT1-211ENST00000552624 CEP152O94986 1710 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms