RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 ASTLQ6HA08 431 aaPredicted RBP13.97□□□□□ -0.17
ATP2B1-207ENST00000550716 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
ATP2B1-207ENST00000550716 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.17
ATP2B1-207ENST00000550716 ILDR2Q71H61 639 aa13.96□□□□□ -0.17
ATP2B1-207ENST00000550716 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
ATP2B1-207ENST00000550716 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
ATP2B1-207ENST00000550716 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
ATP2B1-207ENST00000550716 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
ATP2B1-207ENST00000550716 KIF3BO15066 747 aa13.94□□□□□ -0.18
ATP2B1-207ENST00000550716 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
ATP2B1-207ENST00000550716 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
ATP2B1-207ENST00000550716 PKD2Q13563 968 aa13.93□□□□□ -0.18
ATP2B1-207ENST00000550716 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
ATP2B1-207ENST00000550716 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
ATP2B1-207ENST00000550716 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
ATP2B1-207ENST00000550716 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
ATP2B1-207ENST00000550716 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
ATP2B1-207ENST00000550716 PZPP20742 1482 aa13.92□□□□□ -0.18
ATP2B1-207ENST00000550716 TNRQ92752 1358 aa13.91□□□□□ -0.18
ATP2B1-207ENST00000550716 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
ATP2B1-207ENST00000550716 ARHGEF5Q12774 1597 aa13.91□□□□□ -0.18
ATP2B1-207ENST00000550716 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
ATP2B1-207ENST00000550716 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
ATP2B1-207ENST00000550716 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
ATP2B1-207ENST00000550716 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
ATP2B1-207ENST00000550716 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
ATP2B1-207ENST00000550716 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
ATP2B1-207ENST00000550716 FAM135AQ9P2D6 1515 aa13.87□□□□□ -0.19
ATP2B1-207ENST00000550716 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
ATP2B1-207ENST00000550716 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
ATP2B1-207ENST00000550716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
ATP2B1-207ENST00000550716 ABCC3O15438 1527 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 PSEN1P49768 467 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 PDAP1Q13442 181 aaKnown RBP13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 MROH1Q8NDA8 1641 aa13.85□□□□□ -0.19
ATP2B1-207ENST00000550716 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
ATP2B1-207ENST00000550716 RNF17Q9BXT8 1623 aaKnown RBP13.84□□□□□ -0.19
ATP2B1-207ENST00000550716 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
ATP2B1-207ENST00000550716 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
ATP2B1-207ENST00000550716 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
ATP2B1-207ENST00000550716 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
ATP2B1-207ENST00000550716 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
ATP2B1-207ENST00000550716 MYOM3Q5VTT5 1437 aa13.82□□□□□ -0.2
ATP2B1-207ENST00000550716 NLRP1Q9C000 1473 aa13.82□□□□□ -0.2
ATP2B1-207ENST00000550716 VWDEQ8N2E2 1590 aa13.82□□□□□ -0.2
ATP2B1-207ENST00000550716 UGGT1Q9NYU2 1555 aa13.82□□□□□ -0.2
ATP2B1-207ENST00000550716 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
ATP2B1-207ENST00000550716 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
ATP2B1-207ENST00000550716 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
ATP2B1-207ENST00000550716 SOCS7O14512 581 aa13.8□□□□□ -0.2
ATP2B1-207ENST00000550716 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
ATP2B1-207ENST00000550716 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
ATP2B1-207ENST00000550716 RGL2O15211 777 aa13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 MED14O60244 1454 aa13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 CPS1P31327 1500 aa13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
ATP2B1-207ENST00000550716 ABCC5O15440 1437 aa13.77□□□□□ -0.21
ATP2B1-207ENST00000550716 HSPA1LP34931 641 aa13.77□□□□□ -0.21
ATP2B1-207ENST00000550716 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
ATP2B1-207ENST00000550716 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
ATP2B1-207ENST00000550716 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
ATP2B1-207ENST00000550716 CEP152O94986 1710 aa13.76□□□□□ -0.21
ATP2B1-207ENST00000550716 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
ATP2B1-207ENST00000550716 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
ATP2B1-207ENST00000550716 C7P10643 843 aa13.76□□□□□ -0.21
ATP2B1-207ENST00000550716 DUOX2Q9NRD8 1548 aa13.75□□□□□ -0.21
ATP2B1-207ENST00000550716 KIF15Q9NS87 1388 aa13.75□□□□□ -0.21
ATP2B1-207ENST00000550716 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
ATP2B1-207ENST00000550716 IQGAP1P46940 1657 aa13.74□□□□□ -0.21
ATP2B1-207ENST00000550716 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
ATP2B1-207ENST00000550716 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
ATP2B1-207ENST00000550716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
ATP2B1-207ENST00000550716 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
ATP2B1-207ENST00000550716 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 IER5LQ5T953 404 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 DAPK1P53355 1430 aa13.72□□□□□ -0.21
ATP2B1-207ENST00000550716 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
ATP2B1-207ENST00000550716 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
ATP2B1-207ENST00000550716 ERBINQ96RT1 1412 aa13.71□□□□□ -0.22
ATP2B1-207ENST00000550716 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.22
ATP2B1-207ENST00000550716 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 TOM1O60784 492 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 SEC24BO95487 1268 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 LTKP29376 864 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
ATP2B1-207ENST00000550716 LHX8Q68G74 356 aa13.68□□□□□ -0.22
ATP2B1-207ENST00000550716 SLIT1O75093 1534 aa13.68□□□□□ -0.22
ATP2B1-207ENST00000550716 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
ATP2B1-207ENST00000550716 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms