RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
CALCOCO1-217ENST00000549935 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
CALCOCO1-217ENST00000549935 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
CALCOCO1-217ENST00000549935 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
CALCOCO1-217ENST00000549935 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
CALCOCO1-217ENST00000549935 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 KNSTRNQ9Y448 316 aa16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
CALCOCO1-217ENST00000549935 IQGAP1P46940 1657 aa16.63■□□□□ 0.25
CALCOCO1-217ENST00000549935 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-217ENST00000549935 TRPM2O94759 1503 aa16.62■□□□□ 0.25
CALCOCO1-217ENST00000549935 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
CALCOCO1-217ENST00000549935 EIF3AQ14152 1382 aaKnown RBP16.62■□□□□ 0.25
CALCOCO1-217ENST00000549935 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
CALCOCO1-217ENST00000549935 SPHKAPQ2M3C7 1700 aa16.61■□□□□ 0.25
CALCOCO1-217ENST00000549935 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
CALCOCO1-217ENST00000549935 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
CALCOCO1-217ENST00000549935 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
CALCOCO1-217ENST00000549935 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 CEP152O94986 1710 aa16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
CALCOCO1-217ENST00000549935 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
CALCOCO1-217ENST00000549935 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
CALCOCO1-217ENST00000549935 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
CALCOCO1-217ENST00000549935 CDCA8Q53HL2 280 aa16.58■□□□□ 0.25
CALCOCO1-217ENST00000549935 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.25
CALCOCO1-217ENST00000549935 PTPRTO14522 1441 aa16.58■□□□□ 0.24
CALCOCO1-217ENST00000549935 PIK3C2GO75747 1445 aa16.58■□□□□ 0.24
CALCOCO1-217ENST00000549935 SYNMO15061 1565 aa16.58■□□□□ 0.24
CALCOCO1-217ENST00000549935 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
CALCOCO1-217ENST00000549935 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
CALCOCO1-217ENST00000549935 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
CALCOCO1-217ENST00000549935 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
CALCOCO1-217ENST00000549935 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
CALCOCO1-217ENST00000549935 TET3O43151 1660 aa16.55■□□□□ 0.24
CALCOCO1-217ENST00000549935 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
CALCOCO1-217ENST00000549935 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
CALCOCO1-217ENST00000549935 MYOM1P52179 1685 aa16.54■□□□□ 0.24
CALCOCO1-217ENST00000549935 KANK1Q14678 1352 aa16.54■□□□□ 0.24
CALCOCO1-217ENST00000549935 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
CALCOCO1-217ENST00000549935 ARAP3Q8WWN8 1544 aa16.53■□□□□ 0.24
CALCOCO1-217ENST00000549935 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
CALCOCO1-217ENST00000549935 KIF3BO15066 747 aa16.52■□□□□ 0.24
CALCOCO1-217ENST00000549935 ATP7AQ04656 1500 aa16.52■□□□□ 0.24
CALCOCO1-217ENST00000549935 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
CALCOCO1-217ENST00000549935 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
CALCOCO1-217ENST00000549935 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.23
CALCOCO1-217ENST00000549935 FANCAO15360 1455 aa16.51■□□□□ 0.23
CALCOCO1-217ENST00000549935 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
CALCOCO1-217ENST00000549935 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
CALCOCO1-217ENST00000549935 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
CALCOCO1-217ENST00000549935 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-217ENST00000549935 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
CALCOCO1-217ENST00000549935 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
CALCOCO1-217ENST00000549935 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
CALCOCO1-217ENST00000549935 USP19O94966 1318 aa16.48■□□□□ 0.23
CALCOCO1-217ENST00000549935 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
CALCOCO1-217ENST00000549935 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
CALCOCO1-217ENST00000549935 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
CALCOCO1-217ENST00000549935 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
CALCOCO1-217ENST00000549935 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
CALCOCO1-217ENST00000549935 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
CALCOCO1-217ENST00000549935 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
CALCOCO1-217ENST00000549935 E9PSI1 815 aa16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 ADGRL1O94910 1474 aa16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 RGS3P49796 1198 aa16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.46■□□□□ 0.23
CALCOCO1-217ENST00000549935 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
CALCOCO1-217ENST00000549935 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
CALCOCO1-217ENST00000549935 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
CALCOCO1-217ENST00000549935 AAMPQ13685 434 aa16.45■□□□□ 0.22
CALCOCO1-217ENST00000549935 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
CALCOCO1-217ENST00000549935 APAF1O14727 1248 aa16.44■□□□□ 0.22
CALCOCO1-217ENST00000549935 MYOM2P54296 1465 aa16.44■□□□□ 0.22
CALCOCO1-217ENST00000549935 BECN1Q14457 450 aa16.43■□□□□ 0.22
CALCOCO1-217ENST00000549935 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-217ENST00000549935 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
CALCOCO1-217ENST00000549935 KIF1BO60333 1816 aa16.42■□□□□ 0.22
CALCOCO1-217ENST00000549935 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
CALCOCO1-217ENST00000549935 IGHDP01880 384 aa16.42■□□□□ 0.22
CALCOCO1-217ENST00000549935 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
CALCOCO1-217ENST00000549935 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
CALCOCO1-217ENST00000549935 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
CALCOCO1-217ENST00000549935 MROH2AA6NES4 1674 aa16.4■□□□□ 0.22
CALCOCO1-217ENST00000549935 BCAR3O75815 825 aa16.39■□□□□ 0.21
CALCOCO1-217ENST00000549935 CLUAP1Q96AJ1 413 aa16.39■□□□□ 0.21
CALCOCO1-217ENST00000549935 PPRC1Q5VV67 1664 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-217ENST00000549935 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-217ENST00000549935 IFT172Q9UG01 1749 aa16.38■□□□□ 0.21
CALCOCO1-217ENST00000549935 ANTXR1Q9H6X2 564 aa16.38■□□□□ 0.21
CALCOCO1-217ENST00000549935 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
CALCOCO1-217ENST00000549935 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms