RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-208ENST00000549537 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
TMEM116-208ENST00000549537 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
TMEM116-208ENST00000549537 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
TMEM116-208ENST00000549537 ATP7AQ04656 1500 aa10.6□□□□□ -0.71
TMEM116-208ENST00000549537 MAP3K1Q13233 1512 aa10.6□□□□□ -0.71
TMEM116-208ENST00000549537 HNRNPMP52272 730 aaKnown RBP eCLIP10.6□□□□□ -0.71
TMEM116-208ENST00000549537 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-208ENST00000549537 PDAP1Q13442 181 aaKnown RBP10.59□□□□□ -0.71
TMEM116-208ENST00000549537 MLECQ14165 292 aa10.59□□□□□ -0.71
TMEM116-208ENST00000549537 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
TMEM116-208ENST00000549537 PLXNC1O60486 1568 aa10.59□□□□□ -0.71
TMEM116-208ENST00000549537 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.71
TMEM116-208ENST00000549537 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.72
TMEM116-208ENST00000549537 G3V3G9 751 aa10.56□□□□□ -0.72
TMEM116-208ENST00000549537 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
TMEM116-208ENST00000549537 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
TMEM116-208ENST00000549537 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
TMEM116-208ENST00000549537 C3P01024 1663 aa10.55□□□□□ -0.72
TMEM116-208ENST00000549537 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 ADGBQ8N7X0 1667 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 ARHGEF5Q12774 1597 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
TMEM116-208ENST00000549537 A2MP01023 1474 aa10.54□□□□□ -0.72
TMEM116-208ENST00000549537 SETD1BQ9UPS6 1966 aaKnown RBP10.54□□□□□ -0.72
TMEM116-208ENST00000549537 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
TMEM116-208ENST00000549537 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
TMEM116-208ENST00000549537 CCDC141Q6ZP82 1450 aa10.53□□□□□ -0.72
TMEM116-208ENST00000549537 MROH2AA6NES4 1674 aa10.53□□□□□ -0.72
TMEM116-208ENST00000549537 HSPA2P54652 639 aa10.52□□□□□ -0.73
TMEM116-208ENST00000549537 EMP3P54852 163 aa10.52□□□□□ -0.73
TMEM116-208ENST00000549537 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
TMEM116-208ENST00000549537 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
TMEM116-208ENST00000549537 CNTLNQ9NXG0 1405 aa10.51□□□□□ -0.73
TMEM116-208ENST00000549537 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
TMEM116-208ENST00000549537 ILDR2Q71H61 639 aa10.51□□□□□ -0.73
TMEM116-208ENST00000549537 CERKQ8TCT0 537 aa10.51□□□□□ -0.73
TMEM116-208ENST00000549537 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
TMEM116-208ENST00000549537 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
TMEM116-208ENST00000549537 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
TMEM116-208ENST00000549537 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
TMEM116-208ENST00000549537 CLTCQ00610 1675 aaKnown RBP10.49□□□□□ -0.73
TMEM116-208ENST00000549537 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
TMEM116-208ENST00000549537 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
TMEM116-208ENST00000549537 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
TMEM116-208ENST00000549537 ZMYM3Q14202 1370 aa10.47□□□□□ -0.73
TMEM116-208ENST00000549537 NPATQ14207 1427 aa10.47□□□□□ -0.73
TMEM116-208ENST00000549537 UHRF1BP1Q6BDS2 1440 aa10.47□□□□□ -0.73
TMEM116-208ENST00000549537 SOCS7O14512 581 aa10.46□□□□□ -0.73
TMEM116-208ENST00000549537 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-208ENST00000549537 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
TMEM116-208ENST00000549537 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
TMEM116-208ENST00000549537 PTPN23Q9H3S7 1636 aa10.44□□□□□ -0.74
TMEM116-208ENST00000549537 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
TMEM116-208ENST00000549537 PTPRKQ15262 1439 aa10.44□□□□□ -0.74
TMEM116-208ENST00000549537 GGT6Q6P531 493 aa10.44□□□□□ -0.74
TMEM116-208ENST00000549537 RNF17Q9BXT8 1623 aaKnown RBP10.44□□□□□ -0.74
TMEM116-208ENST00000549537 TCOF1Q13428 1488 aaKnown RBP10.43□□□□□ -0.74
TMEM116-208ENST00000549537 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
TMEM116-208ENST00000549537 ZNF142P52746 1687 aaPredicted RBP10.43□□□□□ -0.74
TMEM116-208ENST00000549537 MYO3AQ8NEV4 1616 aa10.43□□□□□ -0.74
TMEM116-208ENST00000549537 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
TMEM116-208ENST00000549537 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
TMEM116-208ENST00000549537 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 KIF3BO15066 747 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 TSPY4P0CV99 314 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 TSPY10P0CW01 314 aa10.42□□□□□ -0.74
TMEM116-208ENST00000549537 EIF2AK4Q9P2K8 1649 aaKnown RBP10.42□□□□□ -0.74
TMEM116-208ENST00000549537 ABCC5O15440 1437 aa10.41□□□□□ -0.74
TMEM116-208ENST00000549537 DISP3Q9P2K9 1392 aa10.41□□□□□ -0.74
TMEM116-208ENST00000549537 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
TMEM116-208ENST00000549537 LTBP4Q8N2S1 1624 aa10.41□□□□□ -0.74
TMEM116-208ENST00000549537 MROH1Q8NDA8 1641 aa10.41□□□□□ -0.74
TMEM116-208ENST00000549537 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
TMEM116-208ENST00000549537 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
TMEM116-208ENST00000549537 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
TMEM116-208ENST00000549537 PZPP20742 1482 aa10.4□□□□□ -0.74
TMEM116-208ENST00000549537 DAPK1P53355 1430 aa10.4□□□□□ -0.75
TMEM116-208ENST00000549537 CEP170BQ9Y4F5 1589 aaPredicted RBP10.39□□□□□ -0.75
TMEM116-208ENST00000549537 DUOX2Q9NRD8 1548 aa10.39□□□□□ -0.75
TMEM116-208ENST00000549537 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
TMEM116-208ENST00000549537 CAMSAP1Q5T5Y3 1602 aa10.39□□□□□ -0.75
TMEM116-208ENST00000549537 ABCC3O15438 1527 aa10.38□□□□□ -0.75
TMEM116-208ENST00000549537 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
TMEM116-208ENST00000549537 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
TMEM116-208ENST00000549537 PTPRTO14522 1441 aa10.38□□□□□ -0.75
TMEM116-208ENST00000549537 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-208ENST00000549537 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
TMEM116-208ENST00000549537 WASHC2CQ9Y4E1 1318 aa10.35□□□□□ -0.75
TMEM116-208ENST00000549537 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-208ENST00000549537 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms