RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
HDAC7-228ENST00000548938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC7-228ENST00000548938 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
HDAC7-228ENST00000548938 BRPF3Q9ULD4 1205 aa17.98■□□□□ 0.47
HDAC7-228ENST00000548938 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
HDAC7-228ENST00000548938 GSE1Q14687 1217 aa17.98■□□□□ 0.47
HDAC7-228ENST00000548938 LAMC1P11047 1609 aa17.97■□□□□ 0.47
HDAC7-228ENST00000548938 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
HDAC7-228ENST00000548938 SCAPERQ9BY12 1400 aa17.97■□□□□ 0.47
HDAC7-228ENST00000548938 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
HDAC7-228ENST00000548938 UNC13BO14795 1591 aa17.97■□□□□ 0.47
HDAC7-228ENST00000548938 CENPQQ7L2Z9 268 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-228ENST00000548938 ZFYVE16Q7Z3T8 1539 aa17.96■□□□□ 0.46
HDAC7-228ENST00000548938 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
HDAC7-228ENST00000548938 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
HDAC7-228ENST00000548938 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
HDAC7-228ENST00000548938 TMF1P82094 1093 aa17.94■□□□□ 0.46
HDAC7-228ENST00000548938 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
HDAC7-228ENST00000548938 CD109Q6YHK3 1445 aa17.94■□□□□ 0.46
HDAC7-228ENST00000548938 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
HDAC7-228ENST00000548938 FRAT1Q92837 279 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-228ENST00000548938 MAGI2Q86UL8 1455 aa17.92■□□□□ 0.46
HDAC7-228ENST00000548938 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-228ENST00000548938 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
HDAC7-228ENST00000548938 ATP7AQ04656 1500 aa17.9■□□□□ 0.46
HDAC7-228ENST00000548938 IQGAP3Q86VI3 1631 aa17.9■□□□□ 0.46
HDAC7-228ENST00000548938 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
HDAC7-228ENST00000548938 WDR43Q15061 677 aaKnown RBP eCLIP17.9■□□□□ 0.463e-9■■■■□ 20.2
HDAC7-228ENST00000548938 ZNF521Q96K83 1311 aa17.9■□□□□ 0.46
HDAC7-228ENST00000548938 INO80Q9ULG1 1556 aaPredicted RBP17.9■□□□□ 0.46
HDAC7-228ENST00000548938 RGS3P49796 1198 aa17.89■□□□□ 0.45
HDAC7-228ENST00000548938 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
HDAC7-228ENST00000548938 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
HDAC7-228ENST00000548938 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
HDAC7-228ENST00000548938 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
HDAC7-228ENST00000548938 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
HDAC7-228ENST00000548938 FRAT2O75474 233 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-228ENST00000548938 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-228ENST00000548938 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
HDAC7-228ENST00000548938 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
HDAC7-228ENST00000548938 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-228ENST00000548938 SLFN5Q08AF3 891 aa17.83■□□□□ 0.45
HDAC7-228ENST00000548938 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
HDAC7-228ENST00000548938 KIF3BO15066 747 aa17.82■□□□□ 0.44
HDAC7-228ENST00000548938 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
HDAC7-228ENST00000548938 CFAP74Q9C0B2 1584 aa17.81■□□□□ 0.44
HDAC7-228ENST00000548938 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-228ENST00000548938 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
HDAC7-228ENST00000548938 ATP10AO60312 1499 aa17.8■□□□□ 0.44
HDAC7-228ENST00000548938 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
HDAC7-228ENST00000548938 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
HDAC7-228ENST00000548938 BCAR3O75815 825 aa17.78■□□□□ 0.44
HDAC7-228ENST00000548938 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
HDAC7-228ENST00000548938 PIK3C2GO75747 1445 aa17.78■□□□□ 0.44
HDAC7-228ENST00000548938 NEO1Q92859 1461 aa17.78■□□□□ 0.44
HDAC7-228ENST00000548938 SYNMO15061 1565 aa17.78■□□□□ 0.44
HDAC7-228ENST00000548938 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
HDAC7-228ENST00000548938 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.44
HDAC7-228ENST00000548938 IQGAP1P46940 1657 aa17.77■□□□□ 0.44
HDAC7-228ENST00000548938 RAPGEF3O95398 923 aa17.77■□□□□ 0.43
HDAC7-228ENST00000548938 APAF1O14727 1248 aa17.76■□□□□ 0.43
HDAC7-228ENST00000548938 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
HDAC7-228ENST00000548938 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
HDAC7-228ENST00000548938 USP19O94966 1318 aa17.75■□□□□ 0.43
HDAC7-228ENST00000548938 IGHDP01880 384 aa17.75■□□□□ 0.43
HDAC7-228ENST00000548938 KANK1Q14678 1352 aa17.75■□□□□ 0.43
HDAC7-228ENST00000548938 VWDEQ8N2E2 1590 aa17.75■□□□□ 0.43
HDAC7-228ENST00000548938 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
HDAC7-228ENST00000548938 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
HDAC7-228ENST00000548938 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
HDAC7-228ENST00000548938 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
HDAC7-228ENST00000548938 MYOM1P52179 1685 aa17.73■□□□□ 0.43
HDAC7-228ENST00000548938 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
HDAC7-228ENST00000548938 GLI2P10070 1586 aa17.72■□□□□ 0.43
HDAC7-228ENST00000548938 HECW2Q9P2P5 1572 aa17.72■□□□□ 0.43
HDAC7-228ENST00000548938 CDCA8Q53HL2 280 aa17.71■□□□□ 0.43
HDAC7-228ENST00000548938 SEC24BO95487 1268 aa17.71■□□□□ 0.43
HDAC7-228ENST00000548938 PTPRTO14522 1441 aa17.71■□□□□ 0.43
HDAC7-228ENST00000548938 SCAF11Q99590 1463 aaKnown RBP17.71■□□□□ 0.43
HDAC7-228ENST00000548938 TET3O43151 1660 aa17.7■□□□□ 0.42
HDAC7-228ENST00000548938 E9PSI1 815 aa17.7■□□□□ 0.42
HDAC7-228ENST00000548938 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
HDAC7-228ENST00000548938 NPC1L1Q9UHC9 1359 aa17.69■□□□□ 0.42
HDAC7-228ENST00000548938 TRPM2O94759 1503 aa17.68■□□□□ 0.42
HDAC7-228ENST00000548938 POGKQ9P215 609 aa17.68■□□□□ 0.42
HDAC7-228ENST00000548938 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
HDAC7-228ENST00000548938 PANK1Q8TE04 598 aa17.67■□□□□ 0.42
HDAC7-228ENST00000548938 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
HDAC7-228ENST00000548938 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
HDAC7-228ENST00000548938 DIP2BQ9P265 1576 aa17.67■□□□□ 0.42
HDAC7-228ENST00000548938 CLUAP1Q96AJ1 413 aa17.66■□□□□ 0.42
HDAC7-228ENST00000548938 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
HDAC7-228ENST00000548938 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
HDAC7-228ENST00000548938 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-228ENST00000548938 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
HDAC7-228ENST00000548938 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
HDAC7-228ENST00000548938 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-228ENST00000548938 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
HDAC7-228ENST00000548938 GGT6Q6P531 493 aa17.65■□□□□ 0.42
HDAC7-228ENST00000548938 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms