RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 MAP3K7O43318 606 aa11.45□□□□□ -0.58
NCKAP1L-205ENST00000548916 LOC100996750A0A140TA64 210 aa11.44□□□□□ -0.58
NCKAP1L-205ENST00000548916 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
NCKAP1L-205ENST00000548916 KRTAP4-6Q9BYQ5 205 aa11.44□□□□□ -0.58
NCKAP1L-205ENST00000548916 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
NCKAP1L-205ENST00000548916 ZPR1O75312 459 aa11.43□□□□□ -0.58
NCKAP1L-205ENST00000548916 EN1Q05925 392 aaPredicted RBP11.43□□□□□ -0.58
NCKAP1L-205ENST00000548916 DDX12PQ92771 950 aa11.43□□□□□ -0.58
NCKAP1L-205ENST00000548916 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
NCKAP1L-205ENST00000548916 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
NCKAP1L-205ENST00000548916 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
NCKAP1L-205ENST00000548916 PNMA3Q9UL41 463 aa11.42□□□□□ -0.58
NCKAP1L-205ENST00000548916 WIPF1O43516 503 aa11.41□□□□□ -0.58
NCKAP1L-205ENST00000548916 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
NCKAP1L-205ENST00000548916 ZNF697Q5TEC3 545 aa11.41□□□□□ -0.58
NCKAP1L-205ENST00000548916 TATDN2Q93075 761 aa11.41□□□□□ -0.58
NCKAP1L-205ENST00000548916 ARIH1Q9Y4X5 557 aaPredicted RBP11.41□□□□□ -0.58
NCKAP1L-205ENST00000548916 PRSS12P56730 875 aa11.4□□□□□ -0.58
NCKAP1L-205ENST00000548916 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
NCKAP1L-205ENST00000548916 TNFRSF10AO00220 468 aa11.39□□□□□ -0.59
NCKAP1L-205ENST00000548916 DPYSL4O14531 572 aa11.38□□□□□ -0.59
NCKAP1L-205ENST00000548916 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
NCKAP1L-205ENST00000548916 SEMA3EO15041 775 aa11.37□□□□□ -0.59
NCKAP1L-205ENST00000548916 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
NCKAP1L-205ENST00000548916 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
NCKAP1L-205ENST00000548916 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
NCKAP1L-205ENST00000548916 GDF9O60383 454 aa11.35□□□□□ -0.59
NCKAP1L-205ENST00000548916 SLC4A3P48751 1232 aa11.35□□□□□ -0.59
NCKAP1L-205ENST00000548916 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
NCKAP1L-205ENST00000548916 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
NCKAP1L-205ENST00000548916 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
NCKAP1L-205ENST00000548916 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
NCKAP1L-205ENST00000548916 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
NCKAP1L-205ENST00000548916 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
NCKAP1L-205ENST00000548916 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
NCKAP1L-205ENST00000548916 C3orf80F5H4A9 247 aa11.3□□□□□ -0.6
NCKAP1L-205ENST00000548916 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
NCKAP1L-205ENST00000548916 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
NCKAP1L-205ENST00000548916 CRIPAKQ8N1N5 446 aa11.3□□□□□ -0.6
NCKAP1L-205ENST00000548916 SMYD5Q6GMV2 418 aa11.29□□□□□ -0.6
NCKAP1L-205ENST00000548916 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
NCKAP1L-205ENST00000548916 SWT1Q5T5J6 900 aaKnown RBP11.27□□□□□ -0.61
NCKAP1L-205ENST00000548916 GMPR2Q9P2T1 348 aaKnown RBP11.27□□□□□ -0.61
NCKAP1L-205ENST00000548916 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
NCKAP1L-205ENST00000548916 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
NCKAP1L-205ENST00000548916 AXIN1O15169 862 aa11.24□□□□□ -0.61
NCKAP1L-205ENST00000548916 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
NCKAP1L-205ENST00000548916 TLL1O43897 1013 aa11.23□□□□□ -0.61
NCKAP1L-205ENST00000548916 S1PR4O95977 384 aa11.23□□□□□ -0.61
NCKAP1L-205ENST00000548916 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
NCKAP1L-205ENST00000548916 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
NCKAP1L-205ENST00000548916 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
NCKAP1L-205ENST00000548916 ZMYND10O75800 440 aa11.2□□□□□ -0.62
NCKAP1L-205ENST00000548916 AVPP01185 164 aa11.19□□□□□ -0.62
NCKAP1L-205ENST00000548916 FOXC1Q12948 553 aa11.19□□□□□ -0.62
NCKAP1L-205ENST00000548916 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
NCKAP1L-205ENST00000548916 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1L-205ENST00000548916 PDIA6Q15084 440 aa11.18□□□□□ -0.62
NCKAP1L-205ENST00000548916 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1L-205ENST00000548916 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
NCKAP1L-205ENST00000548916 TERTO14746 1132 aaKnown RBP11.15□□□□□ -0.62
NCKAP1L-205ENST00000548916 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
NCKAP1L-205ENST00000548916 PKD2L1Q9P0L9 805 aa11.15□□□□□ -0.62
NCKAP1L-205ENST00000548916 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
NCKAP1L-205ENST00000548916 ADH1BP00325 375 aa11.13□□□□□ -0.63
NCKAP1L-205ENST00000548916 SMCPP49901 116 aaPredicted RBP11.13□□□□□ -0.63
NCKAP1L-205ENST00000548916 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
NCKAP1L-205ENST00000548916 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
NCKAP1L-205ENST00000548916 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
NCKAP1L-205ENST00000548916 PLA2G2CQ5R387 149 aa11.1□□□□□ -0.63
NCKAP1L-205ENST00000548916 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
NCKAP1L-205ENST00000548916 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
NCKAP1L-205ENST00000548916 SUZ12Q15022 739 aaKnown RBP11.09□□□□□ -0.63
NCKAP1L-205ENST00000548916 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
NCKAP1L-205ENST00000548916 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
NCKAP1L-205ENST00000548916 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
NCKAP1L-205ENST00000548916 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
NCKAP1L-205ENST00000548916 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
NCKAP1L-205ENST00000548916 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
NCKAP1L-205ENST00000548916 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
NCKAP1L-205ENST00000548916 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
NCKAP1L-205ENST00000548916 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
NCKAP1L-205ENST00000548916 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
NCKAP1L-205ENST00000548916 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
NCKAP1L-205ENST00000548916 NR1I2O75469 434 aa11.05□□□□□ -0.64
NCKAP1L-205ENST00000548916 PADI6Q6TGC4 694 aa11.05□□□□□ -0.64
NCKAP1L-205ENST00000548916 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
NCKAP1L-205ENST00000548916 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
NCKAP1L-205ENST00000548916 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
NCKAP1L-205ENST00000548916 RPIAP49247 311 aa11.03□□□□□ -0.64
NCKAP1L-205ENST00000548916 ZSCAN1Q8NBB4 408 aa11.03□□□□□ -0.64
NCKAP1L-205ENST00000548916 AK7Q96M32 723 aa11.03□□□□□ -0.64
NCKAP1L-205ENST00000548916 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
NCKAP1L-205ENST00000548916 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
NCKAP1L-205ENST00000548916 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
NCKAP1L-205ENST00000548916 EYA1Q99502 592 aa11.01□□□□□ -0.65
NCKAP1L-205ENST00000548916 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
NCKAP1L-205ENST00000548916 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
NCKAP1L-205ENST00000548916 CFHP08603 1231 aa10.98□□□□□ -0.65
NCKAP1L-205ENST00000548916 KIFC2Q96AC6 838 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms