RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 NUP155O75694 1391 aa7.49□□□□□ -1.21
APP-217ENST00000548570 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
APP-217ENST00000548570 KDM5DQ9BY66 1539 aa7.49□□□□□ -1.21
APP-217ENST00000548570 BCORL1Q5H9F3 1711 aa7.49□□□□□ -1.21
APP-217ENST00000548570 DEPDC5O75140 1603 aa7.49□□□□□ -1.21
APP-217ENST00000548570 RNF17Q9BXT8 1623 aaKnown RBP7.49□□□□□ -1.21
APP-217ENST00000548570 ABCC3O15438 1527 aa7.48□□□□□ -1.21
APP-217ENST00000548570 LMTK2Q8IWU2 1503 aa7.48□□□□□ -1.21
APP-217ENST00000548570 GCC2Q8IWJ2 1684 aa7.48□□□□□ -1.21
APP-217ENST00000548570 UNC13BO14795 1591 aa7.48□□□□□ -1.21
APP-217ENST00000548570 EIF2AK4Q9P2K8 1649 aaKnown RBP7.48□□□□□ -1.21
APP-217ENST00000548570 CEBPAP49715 358 aaPredicted RBP7.47□□□□□ -1.21
APP-217ENST00000548570 FBXO31Q5XUX0 539 aaPredicted RBP7.47□□□□□ -1.21
APP-217ENST00000548570 MPHOSPH9Q99550 1183 aa7.47□□□□□ -1.21
APP-217ENST00000548570 PLA2R1Q13018 1463 aa7.47□□□□□ -1.21
APP-217ENST00000548570 WASHC2CQ9Y4E1 1318 aa7.47□□□□□ -1.21
APP-217ENST00000548570 FAM135AQ9P2D6 1515 aa7.47□□□□□ -1.21
APP-217ENST00000548570 ZMYM3Q14202 1370 aa7.46□□□□□ -1.21
APP-217ENST00000548570 DHX57Q6P158 1386 aaKnown RBP7.46□□□□□ -1.21
APP-217ENST00000548570 NPATQ14207 1427 aa7.46□□□□□ -1.21
APP-217ENST00000548570 TRIM52Q96A61 297 aa7.46□□□□□ -1.22
APP-217ENST00000548570 ADAMTSL3P82987 1691 aa7.46□□□□□ -1.22
APP-217ENST00000548570 ARHGAP31Q2M1Z3 1444 aa7.45□□□□□ -1.22
APP-217ENST00000548570 PKD2Q13563 968 aa7.45□□□□□ -1.22
APP-217ENST00000548570 CCDC61Q9Y6R9 512 aa7.44□□□□□ -1.22
APP-217ENST00000548570 IQGAP3Q86VI3 1631 aa7.44□□□□□ -1.22
APP-217ENST00000548570 MADDQ8WXG6 1647 aa7.44□□□□□ -1.22
APP-217ENST00000548570 PTPRTO14522 1441 aa7.44□□□□□ -1.22
APP-217ENST00000548570 NOS1P29475 1434 aa7.44□□□□□ -1.22
APP-217ENST00000548570 PTPRMP28827 1452 aa7.43□□□□□ -1.22
APP-217ENST00000548570 ANKRD30BQ9BXX2 1392 aa7.43□□□□□ -1.22
APP-217ENST00000548570 EFCAB6Q5THR3 1501 aa7.42□□□□□ -1.22
APP-217ENST00000548570 ATN1P54259 1190 aaPredicted RBP7.42□□□□□ -1.22
APP-217ENST00000548570 MIER1Q8N108 512 aa7.42□□□□□ -1.22
APP-217ENST00000548570 KIF12Q96FN5 646 aa7.42□□□□□ -1.22
APP-217ENST00000548570 FAM163AQ96GL9 167 aaPredicted RBP7.42□□□□□ -1.22
APP-217ENST00000548570 KANK1Q14678 1352 aa7.42□□□□□ -1.22
APP-217ENST00000548570 CNTLNQ9NXG0 1405 aa7.42□□□□□ -1.22
APP-217ENST00000548570 SEC24BO95487 1268 aa7.41□□□□□ -1.22
APP-217ENST00000548570 TIE1P35590 1138 aa7.41□□□□□ -1.22
APP-217ENST00000548570 ERVK-7P63135 1459 aa7.41□□□□□ -1.22
APP-217ENST00000548570 PROM2Q8N271 834 aa7.4□□□□□ -1.22
APP-217ENST00000548570 ZBTB47Q9UFB7 747 aaPredicted RBP7.4□□□□□ -1.22
APP-217ENST00000548570 RPRD2Q5VT52 1461 aaKnown RBP7.4□□□□□ -1.22
APP-217ENST00000548570 SPATA31D1Q6ZQQ2 1576 aa7.4□□□□□ -1.22
APP-217ENST00000548570 UGGT1Q9NYU2 1555 aa7.4□□□□□ -1.22
APP-217ENST00000548570 CLTCQ00610 1675 aaKnown RBP7.39□□□□□ -1.23
APP-217ENST00000548570 CAMSAP1Q5T5Y3 1602 aa7.39□□□□□ -1.23
APP-217ENST00000548570 SYNMO15061 1565 aa7.39□□□□□ -1.23
APP-217ENST00000548570 ACIN1Q9UKV3 1341 aaKnown RBP7.39□□□□□ -1.23
APP-217ENST00000548570 IDI1Q13907 227 aa7.39□□□□□ -1.23
APP-217ENST00000548570 SIN3AQ96ST3 1273 aa7.39□□□□□ -1.23
APP-217ENST00000548570 E9PCH4 1651 aa7.38□□□□□ -1.23
APP-217ENST00000548570 TET3O43151 1660 aa7.38□□□□□ -1.23
APP-217ENST00000548570 TNRQ92752 1358 aa7.38□□□□□ -1.23
APP-217ENST00000548570 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
APP-217ENST00000548570 BMP2KQ9NSY1 1161 aaPredicted RBP7.38□□□□□ -1.23
APP-217ENST00000548570 CEP152O94986 1710 aa7.38□□□□□ -1.23
APP-217ENST00000548570 ZC3H13Q5T200 1668 aaKnown RBP7.38□□□□□ -1.23
APP-217ENST00000548570 POTEJP0CG39 1038 aa7.37□□□□□ -1.23
APP-217ENST00000548570 RIMS1Q86UR5 1692 aaKnown RBP7.37□□□□□ -1.23
APP-217ENST00000548570 TRPM2O94759 1503 aa7.37□□□□□ -1.23
APP-217ENST00000548570 SPATA31E1Q6ZUB1 1445 aa7.36□□□□□ -1.23
APP-217ENST00000548570 MROH2AA6NES4 1674 aa7.36□□□□□ -1.23
APP-217ENST00000548570 C3P01024 1663 aa7.36□□□□□ -1.23
APP-217ENST00000548570 MAP3K13O43283 966 aa7.36□□□□□ -1.23
APP-217ENST00000548570 SLC52A1Q9NWF4 448 aa7.36□□□□□ -1.23
APP-217ENST00000548570 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
APP-217ENST00000548570 SGIP1Q9BQI5 828 aa7.35□□□□□ -1.23
APP-217ENST00000548570 FER1L4A9Z1Z3 1794 aa7.35□□□□□ -1.23
APP-217ENST00000548570 IER5LQ5T953 404 aa7.34□□□□□ -1.23
APP-217ENST00000548570 A2ML1A8K2U0 1454 aa7.34□□□□□ -1.23
APP-217ENST00000548570 PIK3C2BO00750 1634 aa7.34□□□□□ -1.24
APP-217ENST00000548570 CLTCL1P53675 1640 aa7.34□□□□□ -1.24
APP-217ENST00000548570 PREX1Q8TCU6 1659 aa7.33□□□□□ -1.24
APP-217ENST00000548570 LMTK3Q96Q04 1460 aa7.33□□□□□ -1.24
APP-217ENST00000548570 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
APP-217ENST00000548570 CCER1Q8TC90 406 aaPredicted RBP7.33□□□□□ -1.24
APP-217ENST00000548570 CCDC144AA2RUR9 1427 aa7.33□□□□□ -1.24
APP-217ENST00000548570 ADGRB3O60242 1522 aa7.32□□□□□ -1.24
APP-217ENST00000548570 TTLL13PA6NNM8 815 aa7.32□□□□□ -1.24
APP-217ENST00000548570 LTKP29376 864 aa7.32□□□□□ -1.24
APP-217ENST00000548570 HSPA2P54652 639 aa7.32□□□□□ -1.24
APP-217ENST00000548570 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
APP-217ENST00000548570 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
APP-217ENST00000548570 CLSPNQ9HAW4 1339 aa7.31□□□□□ -1.24
APP-217ENST00000548570 ARHGAP23Q9P227 1491 aa7.31□□□□□ -1.24
APP-217ENST00000548570 ZFYVE9O95405 1425 aa7.31□□□□□ -1.24
APP-217ENST00000548570 RGL3Q3MIN7 710 aa7.31□□□□□ -1.24
APP-217ENST00000548570 L3MBTL2Q969R5 705 aa7.31□□□□□ -1.24
APP-217ENST00000548570 PCDHB13Q9Y5F0 798 aa7.31□□□□□ -1.24
APP-217ENST00000548570 TMEM2Q9UHN6 1383 aa7.31□□□□□ -1.24
APP-217ENST00000548570 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
APP-217ENST00000548570 MYO3AQ8NEV4 1616 aa7.3□□□□□ -1.24
APP-217ENST00000548570 CEP170BQ9Y4F5 1589 aaPredicted RBP7.3□□□□□ -1.24
APP-217ENST00000548570 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
APP-217ENST00000548570 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
APP-217ENST00000548570 TRIM35Q9UPQ4 493 aa7.3□□□□□ -1.24
APP-217ENST00000548570 SPHKAPQ2M3C7 1700 aa7.3□□□□□ -1.24
APP-217ENST00000548570 ADGRF5Q8IZF2 1346 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms