RNA–Protein interactions for RNA: ENST00000548363.1

TUBA1A-205, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-205ENST00000548363 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
TUBA1A-205ENST00000548363 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
TUBA1A-205ENST00000548363 FBXO31Q5XUX0 539 aaPredicted RBP13.18□□□□□ -0.3
TUBA1A-205ENST00000548363 PHLPP1O60346 1717 aa13.17□□□□□ -0.3
TUBA1A-205ENST00000548363 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
TUBA1A-205ENST00000548363 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
TUBA1A-205ENST00000548363 ABCC5O15440 1437 aa13.16□□□□□ -0.3
TUBA1A-205ENST00000548363 DAPK1P53355 1430 aa13.16□□□□□ -0.3
TUBA1A-205ENST00000548363 LRP5O75197 1615 aa13.16□□□□□ -0.3
TUBA1A-205ENST00000548363 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
TUBA1A-205ENST00000548363 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
TUBA1A-205ENST00000548363 CEP152O94986 1710 aa13.15□□□□□ -0.3
TUBA1A-205ENST00000548363 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.31
TUBA1A-205ENST00000548363 AFF2P51816 1311 aa13.14□□□□□ -0.31
TUBA1A-205ENST00000548363 MROH1Q8NDA8 1641 aa13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 UGGT1Q9NYU2 1555 aa13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 KIF15Q9NS87 1388 aa13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
TUBA1A-205ENST00000548363 PZPP20742 1482 aa13.12□□□□□ -0.31
TUBA1A-205ENST00000548363 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
TUBA1A-205ENST00000548363 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
TUBA1A-205ENST00000548363 ABCC3O15438 1527 aa13.11□□□□□ -0.31
TUBA1A-205ENST00000548363 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
TUBA1A-205ENST00000548363 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.31
TUBA1A-205ENST00000548363 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
TUBA1A-205ENST00000548363 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
TUBA1A-205ENST00000548363 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
TUBA1A-205ENST00000548363 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
TUBA1A-205ENST00000548363 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
TUBA1A-205ENST00000548363 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
TUBA1A-205ENST00000548363 ERVK-7P63135 1459 aa13.03□□□□□ -0.32
TUBA1A-205ENST00000548363 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
TUBA1A-205ENST00000548363 KCNA6P17658 529 aa13.02□□□□□ -0.33
TUBA1A-205ENST00000548363 HRCP23327 699 aa13.02□□□□□ -0.33
TUBA1A-205ENST00000548363 KANK1Q14678 1352 aa13.02□□□□□ -0.33
TUBA1A-205ENST00000548363 MSH6P52701 1360 aa13.01□□□□□ -0.33
TUBA1A-205ENST00000548363 LTKP29376 864 aa13□□□□□ -0.33
TUBA1A-205ENST00000548363 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
TUBA1A-205ENST00000548363 C8orf37Q96NL8 207 aa13□□□□□ -0.33
TUBA1A-205ENST00000548363 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
TUBA1A-205ENST00000548363 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
TUBA1A-205ENST00000548363 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
TUBA1A-205ENST00000548363 POLA2Q14181 598 aa12.99□□□□□ -0.33
TUBA1A-205ENST00000548363 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
TUBA1A-205ENST00000548363 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
TUBA1A-205ENST00000548363 EP400Q96L91 3159 aa12.98□□□□□ -0.33
TUBA1A-205ENST00000548363 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
TUBA1A-205ENST00000548363 NWD1Q149M9 1564 aa12.98□□□□□ -0.33
TUBA1A-205ENST00000548363 ITGAEP38570 1179 aa12.97□□□□□ -0.33
TUBA1A-205ENST00000548363 UNC13BO14795 1591 aa12.97□□□□□ -0.33
TUBA1A-205ENST00000548363 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
TUBA1A-205ENST00000548363 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
TUBA1A-205ENST00000548363 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
TUBA1A-205ENST00000548363 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
TUBA1A-205ENST00000548363 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
TUBA1A-205ENST00000548363 ROCK1Q13464 1354 aa12.95□□□□□ -0.34
TUBA1A-205ENST00000548363 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
TUBA1A-205ENST00000548363 TET3O43151 1660 aa12.95□□□□□ -0.34
TUBA1A-205ENST00000548363 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
TUBA1A-205ENST00000548363 EID1Q9Y6B2 187 aa12.94□□□□□ -0.34
TUBA1A-205ENST00000548363 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
TUBA1A-205ENST00000548363 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
TUBA1A-205ENST00000548363 AHDC1Q5TGY3 1603 aaPredicted RBP12.92□□□□□ -0.34
TUBA1A-205ENST00000548363 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
TUBA1A-205ENST00000548363 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
TUBA1A-205ENST00000548363 E9PCH4 1651 aa12.91□□□□□ -0.34
TUBA1A-205ENST00000548363 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
TUBA1A-205ENST00000548363 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
TUBA1A-205ENST00000548363 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
TUBA1A-205ENST00000548363 RPRD2Q5VT52 1461 aaKnown RBP12.9□□□□□ -0.34
TUBA1A-205ENST00000548363 MYO5BQ9ULV0 1848 aa12.9□□□□□ -0.34
TUBA1A-205ENST00000548363 NOS1P29475 1434 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 SLIT1O75093 1534 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 USP21Q9UK80 565 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
TUBA1A-205ENST00000548363 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
TUBA1A-205ENST00000548363 ADGRB3O60242 1522 aa12.88□□□□□ -0.35
TUBA1A-205ENST00000548363 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
TUBA1A-205ENST00000548363 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
TUBA1A-205ENST00000548363 IDI1Q13907 227 aa12.86□□□□□ -0.35
TUBA1A-205ENST00000548363 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
TUBA1A-205ENST00000548363 NUP155O75694 1391 aa12.85□□□□□ -0.35
TUBA1A-205ENST00000548363 HAX1O00165 279 aa12.85□□□□□ -0.35
TUBA1A-205ENST00000548363 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
TUBA1A-205ENST00000548363 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
TUBA1A-205ENST00000548363 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
TUBA1A-205ENST00000548363 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
TUBA1A-205ENST00000548363 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
TUBA1A-205ENST00000548363 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms