RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
RFX4-207ENST00000546882 SLIT1O75093 1534 aa13.96□□□□□ -0.17
RFX4-207ENST00000546882 CFAP65Q6ZU64 1925 aaKnown RBP13.96□□□□□ -0.17
RFX4-207ENST00000546882 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
RFX4-207ENST00000546882 TMEM94Q12767 1356 aa13.95□□□□□ -0.18
RFX4-207ENST00000546882 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
RFX4-207ENST00000546882 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
RFX4-207ENST00000546882 MAP3K1Q13233 1512 aa13.93□□□□□ -0.18
RFX4-207ENST00000546882 CEP162Q5TB80 1403 aa13.92□□□□□ -0.18
RFX4-207ENST00000546882 MROH1Q8NDA8 1641 aa13.92□□□□□ -0.18
RFX4-207ENST00000546882 CAMSAP2Q08AD1 1489 aa13.92□□□□□ -0.18
RFX4-207ENST00000546882 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
RFX4-207ENST00000546882 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
RFX4-207ENST00000546882 ARHGEF5Q12774 1597 aa13.89□□□□□ -0.19
RFX4-207ENST00000546882 JCADQ9P266 1359 aa13.89□□□□□ -0.19
RFX4-207ENST00000546882 KCNA6P17658 529 aa13.89□□□□□ -0.19
RFX4-207ENST00000546882 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
RFX4-207ENST00000546882 CEP152O94986 1710 aa13.89□□□□□ -0.19
RFX4-207ENST00000546882 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
RFX4-207ENST00000546882 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
RFX4-207ENST00000546882 LRP6O75581 1613 aa13.87□□□□□ -0.19
RFX4-207ENST00000546882 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
RFX4-207ENST00000546882 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
RFX4-207ENST00000546882 EID1Q9Y6B2 187 aa13.87□□□□□ -0.19
RFX4-207ENST00000546882 TET3O43151 1660 aa13.87□□□□□ -0.19
RFX4-207ENST00000546882 EIF2AK4Q9P2K8 1649 aaKnown RBP13.86□□□□□ -0.19
RFX4-207ENST00000546882 PRDM15P57071 1507 aaPredicted RBP13.86□□□□□ -0.19
RFX4-207ENST00000546882 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
RFX4-207ENST00000546882 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
RFX4-207ENST00000546882 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
RFX4-207ENST00000546882 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
RFX4-207ENST00000546882 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
RFX4-207ENST00000546882 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
RFX4-207ENST00000546882 PIK3C2BO00750 1634 aa13.85□□□□□ -0.19
RFX4-207ENST00000546882 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
RFX4-207ENST00000546882 NWD1Q149M9 1564 aa13.83□□□□□ -0.19
RFX4-207ENST00000546882 MAST1Q9Y2H9 1570 aa13.83□□□□□ -0.19
RFX4-207ENST00000546882 SLC26A8Q96RN1 970 aa13.83□□□□□ -0.2
RFX4-207ENST00000546882 NKTRP30414 1462 aaKnown RBP13.82□□□□□ -0.2
RFX4-207ENST00000546882 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
RFX4-207ENST00000546882 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
RFX4-207ENST00000546882 SPATA31A6Q5VVP1 1343 aa13.81□□□□□ -0.2
RFX4-207ENST00000546882 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
RFX4-207ENST00000546882 MSH6P52701 1360 aa13.81□□□□□ -0.2
RFX4-207ENST00000546882 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
RFX4-207ENST00000546882 CDK12Q9NYV4 1490 aaPredicted RBP13.79□□□□□ -0.2
RFX4-207ENST00000546882 EFCAB6Q5THR3 1501 aa13.79□□□□□ -0.2
RFX4-207ENST00000546882 RXRBP28702 533 aa13.78□□□□□ -0.2
RFX4-207ENST00000546882 IDI1Q13907 227 aa13.78□□□□□ -0.2
RFX4-207ENST00000546882 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
RFX4-207ENST00000546882 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
RFX4-207ENST00000546882 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
RFX4-207ENST00000546882 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
RFX4-207ENST00000546882 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
RFX4-207ENST00000546882 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
RFX4-207ENST00000546882 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
RFX4-207ENST00000546882 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
RFX4-207ENST00000546882 ADGRB3O60242 1522 aa13.7□□□□□ -0.22
RFX4-207ENST00000546882 AFF2P51816 1311 aa13.7□□□□□ -0.22
RFX4-207ENST00000546882 RGS12O14924 1447 aa13.7□□□□□ -0.22
RFX4-207ENST00000546882 NOS1P29475 1434 aa13.7□□□□□ -0.22
RFX4-207ENST00000546882 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.7□□□□□ -0.22
RFX4-207ENST00000546882 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
RFX4-207ENST00000546882 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
RFX4-207ENST00000546882 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
RFX4-207ENST00000546882 ZFYVE9O95405 1425 aa13.69□□□□□ -0.22
RFX4-207ENST00000546882 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
RFX4-207ENST00000546882 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
RFX4-207ENST00000546882 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
RFX4-207ENST00000546882 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
RFX4-207ENST00000546882 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
RFX4-207ENST00000546882 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
RFX4-207ENST00000546882 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 BRINP3Q76B58 766 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 BCANQ96GW7 911 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 MYO5BQ9ULV0 1848 aa13.66□□□□□ -0.22
RFX4-207ENST00000546882 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
RFX4-207ENST00000546882 QTRT2Q9H974 415 aaKnown RBP13.65□□□□□ -0.22
RFX4-207ENST00000546882 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
RFX4-207ENST00000546882 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
RFX4-207ENST00000546882 KANK1Q14678 1352 aa13.65□□□□□ -0.22
RFX4-207ENST00000546882 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
RFX4-207ENST00000546882 ABCC5O15440 1437 aa13.64□□□□□ -0.23
RFX4-207ENST00000546882 ATF3P18847 181 aa13.63□□□□□ -0.23
RFX4-207ENST00000546882 EP400Q96L91 3159 aa13.63□□□□□ -0.23
RFX4-207ENST00000546882 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
RFX4-207ENST00000546882 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
RFX4-207ENST00000546882 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
RFX4-207ENST00000546882 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
RFX4-207ENST00000546882 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
RFX4-207ENST00000546882 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
RFX4-207ENST00000546882 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
RFX4-207ENST00000546882 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
RFX4-207ENST00000546882 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
RFX4-207ENST00000546882 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
RFX4-207ENST00000546882 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
RFX4-207ENST00000546882 GCC2Q8IWJ2 1684 aa13.59□□□□□ -0.23
RFX4-207ENST00000546882 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms