RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TMF1P82094 1093 aa16.35■□□□□ 0.21
CCDC38-202ENST00000546386 DIP2CQ9Y2E4 1556 aa16.35■□□□□ 0.21
CCDC38-202ENST00000546386 TET3O43151 1660 aa16.35■□□□□ 0.21
CCDC38-202ENST00000546386 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
CCDC38-202ENST00000546386 EFCAB6Q5THR3 1501 aa16.34■□□□□ 0.21
CCDC38-202ENST00000546386 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.21
CCDC38-202ENST00000546386 RICTORQ6R327 1708 aa16.33■□□□□ 0.2
CCDC38-202ENST00000546386 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
CCDC38-202ENST00000546386 FKBP8Q14318 412 aa16.33■□□□□ 0.2
CCDC38-202ENST00000546386 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
CCDC38-202ENST00000546386 ABCC3O15438 1527 aa16.31■□□□□ 0.2
CCDC38-202ENST00000546386 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
CCDC38-202ENST00000546386 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
CCDC38-202ENST00000546386 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
CCDC38-202ENST00000546386 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
CCDC38-202ENST00000546386 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-202ENST00000546386 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
CCDC38-202ENST00000546386 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
CCDC38-202ENST00000546386 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
CCDC38-202ENST00000546386 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
CCDC38-202ENST00000546386 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
CCDC38-202ENST00000546386 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
CCDC38-202ENST00000546386 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
CCDC38-202ENST00000546386 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
CCDC38-202ENST00000546386 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
CCDC38-202ENST00000546386 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
CCDC38-202ENST00000546386 GLI2P10070 1586 aa16.23■□□□□ 0.19
CCDC38-202ENST00000546386 KIF1BO60333 1816 aa16.22■□□□□ 0.19
CCDC38-202ENST00000546386 SYNMO15061 1565 aa16.22■□□□□ 0.19
CCDC38-202ENST00000546386 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
CCDC38-202ENST00000546386 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
CCDC38-202ENST00000546386 PNISRQ8TF01 805 aaKnown RBP16.22■□□□□ 0.19
CCDC38-202ENST00000546386 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
CCDC38-202ENST00000546386 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
CCDC38-202ENST00000546386 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
CCDC38-202ENST00000546386 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
CCDC38-202ENST00000546386 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
CCDC38-202ENST00000546386 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
CCDC38-202ENST00000546386 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
CCDC38-202ENST00000546386 SLC52A1Q9NWF4 448 aa16.18■□□□□ 0.18
CCDC38-202ENST00000546386 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
CCDC38-202ENST00000546386 LMTK2Q8IWU2 1503 aa16.17■□□□□ 0.18
CCDC38-202ENST00000546386 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
CCDC38-202ENST00000546386 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
CCDC38-202ENST00000546386 POGKQ9P215 609 aa16.17■□□□□ 0.18
CCDC38-202ENST00000546386 POLR1AO95602 1720 aaPredicted RBP16.17■□□□□ 0.18
CCDC38-202ENST00000546386 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
CCDC38-202ENST00000546386 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
CCDC38-202ENST00000546386 PIK3C2GO75747 1445 aa16.15■□□□□ 0.18
CCDC38-202ENST00000546386 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
CCDC38-202ENST00000546386 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
CCDC38-202ENST00000546386 FBLN1P23142 703 aa16.14■□□□□ 0.17
CCDC38-202ENST00000546386 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
CCDC38-202ENST00000546386 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
CCDC38-202ENST00000546386 TXNDC2Q86VQ3 553 aa16.14■□□□□ 0.17
CCDC38-202ENST00000546386 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
CCDC38-202ENST00000546386 RALBP1Q15311 655 aa16.13■□□□□ 0.17
CCDC38-202ENST00000546386 SLC26A8Q96RN1 970 aa16.13■□□□□ 0.17
CCDC38-202ENST00000546386 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
CCDC38-202ENST00000546386 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
CCDC38-202ENST00000546386 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
CCDC38-202ENST00000546386 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
CCDC38-202ENST00000546386 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
CCDC38-202ENST00000546386 NEFLP07196 543 aa16.11■□□□□ 0.17
CCDC38-202ENST00000546386 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
CCDC38-202ENST00000546386 PIK3C2BO00750 1634 aa16.1■□□□□ 0.17
CCDC38-202ENST00000546386 STAC3Q96MF2 364 aa16.1■□□□□ 0.17
CCDC38-202ENST00000546386 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
CCDC38-202ENST00000546386 MYOM2P54296 1465 aa16.09■□□□□ 0.17
CCDC38-202ENST00000546386 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
CCDC38-202ENST00000546386 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
CCDC38-202ENST00000546386 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
CCDC38-202ENST00000546386 ZMYM4Q5VZL5 1548 aa16.08■□□□□ 0.17
CCDC38-202ENST00000546386 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.16
CCDC38-202ENST00000546386 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
CCDC38-202ENST00000546386 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
CCDC38-202ENST00000546386 NEXMIFQ5QGS0 1516 aa16.07■□□□□ 0.16
CCDC38-202ENST00000546386 PPLO60437 1756 aa16.07■□□□□ 0.16
CCDC38-202ENST00000546386 LTKP29376 864 aa16.07■□□□□ 0.16
CCDC38-202ENST00000546386 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CCDC38-202ENST00000546386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC38-202ENST00000546386 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
CCDC38-202ENST00000546386 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
CCDC38-202ENST00000546386 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
CCDC38-202ENST00000546386 CABP1Q9NZU7 370 aa16.05■□□□□ 0.16
CCDC38-202ENST00000546386 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
CCDC38-202ENST00000546386 ADGRB1O14514 1584 aa16.05■□□□□ 0.16
CCDC38-202ENST00000546386 IFT172Q9UG01 1749 aa16.04■□□□□ 0.16
CCDC38-202ENST00000546386 CDK19Q9BWU1 502 aa16.04■□□□□ 0.16
CCDC38-202ENST00000546386 METP08581 1390 aa16.04■□□□□ 0.16
CCDC38-202ENST00000546386 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
CCDC38-202ENST00000546386 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
CCDC38-202ENST00000546386 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
CCDC38-202ENST00000546386 TMEM131LA2VDJ0 1609 aa16.03■□□□□ 0.16
CCDC38-202ENST00000546386 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.16
CCDC38-202ENST00000546386 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
CCDC38-202ENST00000546386 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
CCDC38-202ENST00000546386 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
CCDC38-202ENST00000546386 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.15
CCDC38-202ENST00000546386 A2ML1A8K2U0 1454 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms