RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 NWD1Q149M9 1564 aa5.65□□□□□ -1.5
LINC01965-204ENST00000545549 CABP2Q9NPB3 220 aa5.65□□□□□ -1.5
LINC01965-204ENST00000545549 SPATA31A6Q5VVP1 1343 aa5.65□□□□□ -1.51
LINC01965-204ENST00000545549 CASKIN1Q8WXD9 1431 aa5.65□□□□□ -1.51
LINC01965-204ENST00000545549 ATP10AO60312 1499 aa5.64□□□□□ -1.51
LINC01965-204ENST00000545549 BCL9LQ86UU0 1499 aa5.64□□□□□ -1.51
LINC01965-204ENST00000545549 GIGYF1O75420 1035 aaPredicted RBP5.64□□□□□ -1.51
LINC01965-204ENST00000545549 RBM6P78332 1123 aaKnown RBP5.64□□□□□ -1.51
LINC01965-204ENST00000545549 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
LINC01965-204ENST00000545549 P3H3Q8IVL6 736 aa5.64□□□□□ -1.51
LINC01965-204ENST00000545549 TAOK2Q9UL54 1235 aa5.64□□□□□ -1.51
LINC01965-204ENST00000545549 TRIM35Q9UPQ4 493 aa5.64□□□□□ -1.51
LINC01965-204ENST00000545549 HS6ST3Q8IZP7 471 aa5.63□□□□□ -1.51
LINC01965-204ENST00000545549 ESF1Q9H501 851 aaKnown RBP5.63□□□□□ -1.51
LINC01965-204ENST00000545549 CLIP1P30622 1438 aa5.63□□□□□ -1.51
LINC01965-204ENST00000545549 CEP170BQ9Y4F5 1589 aaPredicted RBP5.63□□□□□ -1.51
LINC01965-204ENST00000545549 LRRIQ1Q96JM4 1722 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 UBTFP17480 764 aaKnown RBP5.62□□□□□ -1.51
LINC01965-204ENST00000545549 TNS4Q8IZW8 715 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 EFCAB3Q8N7B9 438 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 FYCO1Q9BQS8 1478 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 KDM5CP41229 1560 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 NEURL4Q96JN8 1562 aa5.62□□□□□ -1.51
LINC01965-204ENST00000545549 PSDA5PKW4 1024 aaPredicted RBP5.61□□□□□ -1.51
LINC01965-204ENST00000545549 TROQ12816 1431 aaPredicted RBP5.61□□□□□ -1.51
LINC01965-204ENST00000545549 COL13A1Q5TAT6 717 aaPredicted RBP5.61□□□□□ -1.51
LINC01965-204ENST00000545549 CEP162Q5TB80 1403 aa5.61□□□□□ -1.51
LINC01965-204ENST00000545549 HECW1Q76N89 1606 aa5.61□□□□□ -1.51
LINC01965-204ENST00000545549 SUPT6HQ7KZ85 1726 aaKnown RBP5.61□□□□□ -1.51
LINC01965-204ENST00000545549 MYO3AQ8NEV4 1616 aa5.61□□□□□ -1.51
LINC01965-204ENST00000545549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC01965-204ENST00000545549 CNTLNQ9NXG0 1405 aa5.61□□□□□ -1.51
LINC01965-204ENST00000545549 PLCH2O75038 1416 aa5.6□□□□□ -1.51
LINC01965-204ENST00000545549 GOLGA2Q08379 1002 aa5.6□□□□□ -1.51
LINC01965-204ENST00000545549 NKX1-1Q15270 411 aaPredicted RBP5.6□□□□□ -1.51
LINC01965-204ENST00000545549 ROBO1Q9Y6N7 1651 aa5.59□□□□□ -1.51
LINC01965-204ENST00000545549 BLMP54132 1417 aaPredicted RBP5.59□□□□□ -1.51
LINC01965-204ENST00000545549 FGD6Q6ZV73 1430 aa5.59□□□□□ -1.51
LINC01965-204ENST00000545549 AFF2P51816 1311 aa5.59□□□□□ -1.51
LINC01965-204ENST00000545549 NGLY1Q96IV0 654 aa5.59□□□□□ -1.51
LINC01965-204ENST00000545549 POLR1AO95602 1720 aaPredicted RBP5.59□□□□□ -1.51
LINC01965-204ENST00000545549 CFAP74Q9C0B2 1584 aa5.59□□□□□ -1.52
LINC01965-204ENST00000545549 AGLP35573 1532 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 LOC105371045A0A1W2PR82 267 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 PLEKHD1A6NEE1 506 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 MKRN3Q13064 507 aaKnown RBP5.58□□□□□ -1.52
LINC01965-204ENST00000545549 PHF8Q9UPP1 1060 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 MAP3K1Q13233 1512 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 LRRC9Q6ZRR7 1453 aa5.58□□□□□ -1.52
LINC01965-204ENST00000545549 KIF14Q15058 1648 aa5.57□□□□□ -1.52
LINC01965-204ENST00000545549 MFRPQ9BY79 579 aa5.57□□□□□ -1.52
LINC01965-204ENST00000545549 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
LINC01965-204ENST00000545549 COLQQ9Y215 455 aaPredicted RBP5.57□□□□□ -1.52
LINC01965-204ENST00000545549 PHLPP1O60346 1717 aa5.57□□□□□ -1.52
LINC01965-204ENST00000545549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC01965-204ENST00000545549 NINLQ9Y2I6 1382 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 POTEFA5A3E0 1075 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 DEFB132Q7Z7B7 95 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 BBXQ8WY36 941 aaPredicted RBP5.56□□□□□ -1.52
LINC01965-204ENST00000545549 PCGF6Q9BYE7 350 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC01965-204ENST00000545549 METRNQ9UJH8 293 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 GPATCH8Q9UKJ3 1502 aaKnown RBP5.56□□□□□ -1.52
LINC01965-204ENST00000545549 VPS8Q8N3P4 1428 aa5.56□□□□□ -1.52
LINC01965-204ENST00000545549 STRCP1A6NGW2 1772 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 ARID3CA6NKF2 412 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 HSPA6P17066 643 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 IRX5P78411 483 aaPredicted RBP5.55□□□□□ -1.52
LINC01965-204ENST00000545549 DPY19L2Q6NUT2 758 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 SLC39A7Q92504 469 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 RTEL1-TNFRSF6BF6WH68 1400 aa5.55□□□□□ -1.52
LINC01965-204ENST00000545549 NPHP4O75161 1426 aaPredicted RBP5.55□□□□□ -1.52
LINC01965-204ENST00000545549 COL16A1Q07092 1604 aaPredicted RBP5.55□□□□□ -1.52
LINC01965-204ENST00000545549 CDC42BPBQ9Y5S2 1711 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 EP400Q96L91 3159 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 MROH2AA6NES4 1674 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 A2ML1A8K2U0 1454 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 MED14O60244 1454 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 SCAF11Q99590 1463 aaKnown RBP5.54□□□□□ -1.52
LINC01965-204ENST00000545549 C7P10643 843 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 TRIM26Q12899 539 aaPredicted RBP5.54□□□□□ -1.52
LINC01965-204ENST00000545549 SF3B2Q13435 895 aaKnown RBP5.54□□□□□ -1.52
LINC01965-204ENST00000545549 IER5LQ5T953 404 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 PAXIP1Q6ZW49 1069 aaPredicted RBP5.54□□□□□ -1.52
LINC01965-204ENST00000545549 FBXO22Q8NEZ5 403 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 MS4A4AQ96JQ5 239 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 REREQ9P2R6 1566 aa5.54□□□□□ -1.52
LINC01965-204ENST00000545549 KDM5DQ9BY66 1539 aa5.53□□□□□ -1.52
LINC01965-204ENST00000545549 MBD5Q9P267 1494 aa5.53□□□□□ -1.52
LINC01965-204ENST00000545549 DNMT1P26358 1616 aaKnown RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 SOX12O15370 315 aa5.53□□□□□ -1.52
LINC01965-204ENST00000545549 GTPBP6O43824 516 aaPredicted RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 SEC24BO95487 1268 aa5.53□□□□□ -1.52
LINC01965-204ENST00000545549 ZEB1P37275 1124 aaPredicted RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 RANGAP1P46060 587 aaPredicted RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 PDCD7Q8N8D1 485 aaKnown RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 CFAP44Q96MT7 982 aa5.53□□□□□ -1.52
LINC01965-204ENST00000545549 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.53□□□□□ -1.52
LINC01965-204ENST00000545549 CDK11AQ9UQ88 783 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms