RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.04
MDH1-216ENST00000544381 ROCK1Q13464 1354 aa14.77□□□□□ -0.05
MDH1-216ENST00000544381 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.05
MDH1-216ENST00000544381 NAIPQ13075 1403 aa14.77□□□□□ -0.05
MDH1-216ENST00000544381 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
MDH1-216ENST00000544381 GCC2Q8IWJ2 1684 aa14.75□□□□□ -0.05
MDH1-216ENST00000544381 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
MDH1-216ENST00000544381 PLEKHH2Q8IVE3 1493 aa14.75□□□□□ -0.05
MDH1-216ENST00000544381 CROCC2H7BZ55 1655 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 HNRNPMP52272 730 aaKnown RBP eCLIP14.74□□□□□ -0.05
MDH1-216ENST00000544381 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 A2MP01023 1474 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 ADGBQ8N7X0 1667 aa14.74□□□□□ -0.05
MDH1-216ENST00000544381 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
MDH1-216ENST00000544381 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
MDH1-216ENST00000544381 KIAA1107Q9UPP5 1409 aa14.73□□□□□ -0.05
MDH1-216ENST00000544381 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
MDH1-216ENST00000544381 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
MDH1-216ENST00000544381 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.05
MDH1-216ENST00000544381 ANKRD30AQ9BXX3 1397 aa14.71□□□□□ -0.05
MDH1-216ENST00000544381 SPAG9O60271 1321 aaKnown RBP14.71□□□□□ -0.05
MDH1-216ENST00000544381 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
MDH1-216ENST00000544381 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.06
MDH1-216ENST00000544381 MBD5Q9P267 1494 aa14.71□□□□□ -0.06
MDH1-216ENST00000544381 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
MDH1-216ENST00000544381 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
MDH1-216ENST00000544381 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
MDH1-216ENST00000544381 POLR1AO95602 1720 aaPredicted RBP14.7□□□□□ -0.06
MDH1-216ENST00000544381 ALKQ9UM73 1620 aa14.7□□□□□ -0.06
MDH1-216ENST00000544381 ADGRL2O95490 1459 aa14.7□□□□□ -0.06
MDH1-216ENST00000544381 MAP3K13O43283 966 aa14.67□□□□□ -0.06
MDH1-216ENST00000544381 A2ML1A8K2U0 1454 aa14.67□□□□□ -0.06
MDH1-216ENST00000544381 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
MDH1-216ENST00000544381 TRIM52Q96A61 297 aa14.66□□□□□ -0.06
MDH1-216ENST00000544381 UBAP1LF5GYI3 381 aa14.66□□□□□ -0.06
MDH1-216ENST00000544381 PKD2Q13563 968 aa14.66□□□□□ -0.06
MDH1-216ENST00000544381 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
MDH1-216ENST00000544381 SPOCK2Q92563 424 aa14.64□□□□□ -0.07
MDH1-216ENST00000544381 MAST1Q9Y2H9 1570 aa14.63□□□□□ -0.07
MDH1-216ENST00000544381 GGT6Q6P531 493 aa14.63□□□□□ -0.07
MDH1-216ENST00000544381 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
MDH1-216ENST00000544381 ANKRD50Q9ULJ7 1429 aa14.61□□□□□ -0.07
MDH1-216ENST00000544381 KIF15Q9NS87 1388 aa14.61□□□□□ -0.07
MDH1-216ENST00000544381 PZPP20742 1482 aa14.61□□□□□ -0.07
MDH1-216ENST00000544381 RTEL1-TNFRSF6BF6WH68 1400 aa14.6□□□□□ -0.07
MDH1-216ENST00000544381 CPS1P31327 1500 aa14.6□□□□□ -0.07
MDH1-216ENST00000544381 GSE1Q14687 1217 aa14.6□□□□□ -0.07
MDH1-216ENST00000544381 KDM5DQ9BY66 1539 aa14.59□□□□□ -0.07
MDH1-216ENST00000544381 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
MDH1-216ENST00000544381 HSPA1LP34931 641 aa14.59□□□□□ -0.07
MDH1-216ENST00000544381 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
MDH1-216ENST00000544381 FAM135AQ9P2D6 1515 aa14.59□□□□□ -0.07
MDH1-216ENST00000544381 DEPDC5O75140 1603 aa14.58□□□□□ -0.08
MDH1-216ENST00000544381 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
MDH1-216ENST00000544381 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
MDH1-216ENST00000544381 TNRQ92752 1358 aa14.57□□□□□ -0.08
MDH1-216ENST00000544381 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
MDH1-216ENST00000544381 MED14O60244 1454 aa14.56□□□□□ -0.08
MDH1-216ENST00000544381 PYGBP11216 843 aa14.55□□□□□ -0.08
MDH1-216ENST00000544381 IQGAP1P46940 1657 aa14.54□□□□□ -0.08
MDH1-216ENST00000544381 DUOX2Q9NRD8 1548 aa14.54□□□□□ -0.08
MDH1-216ENST00000544381 RNF17Q9BXT8 1623 aaKnown RBP14.53□□□□□ -0.08
MDH1-216ENST00000544381 ZC3H13Q5T200 1668 aaKnown RBP14.53□□□□□ -0.08
MDH1-216ENST00000544381 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
MDH1-216ENST00000544381 ASTLQ6HA08 431 aaPredicted RBP14.53□□□□□ -0.08
MDH1-216ENST00000544381 MROH1Q8NDA8 1641 aa14.53□□□□□ -0.08
MDH1-216ENST00000544381 ATMINO43313 823 aaPredicted RBP14.52□□□□□ -0.08
MDH1-216ENST00000544381 SIN3AQ96ST3 1273 aa14.52□□□□□ -0.08
MDH1-216ENST00000544381 UGGT1Q9NYU2 1555 aa14.52□□□□□ -0.09
MDH1-216ENST00000544381 NLRP1Q9C000 1473 aa14.51□□□□□ -0.09
MDH1-216ENST00000544381 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
MDH1-216ENST00000544381 NUP155O75694 1391 aa14.51□□□□□ -0.09
MDH1-216ENST00000544381 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
MDH1-216ENST00000544381 KIF3BO15066 747 aa14.5□□□□□ -0.09
MDH1-216ENST00000544381 PIP4K2BP78356 416 aa14.5□□□□□ -0.09
MDH1-216ENST00000544381 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
MDH1-216ENST00000544381 XIRP1Q702N8 1843 aaKnown RBP14.5□□□□□ -0.09
MDH1-216ENST00000544381 ERBINQ96RT1 1412 aa14.5□□□□□ -0.09
MDH1-216ENST00000544381 ABCC3O15438 1527 aa14.5□□□□□ -0.09
MDH1-216ENST00000544381 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
MDH1-216ENST00000544381 CIZ1Q9ULV3 898 aaPredicted RBP14.49□□□□□ -0.09
MDH1-216ENST00000544381 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
MDH1-216ENST00000544381 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
MDH1-216ENST00000544381 SYNMO15061 1565 aa14.49□□□□□ -0.09
MDH1-216ENST00000544381 UBR1Q8IWV7 1749 aa14.47□□□□□ -0.09
MDH1-216ENST00000544381 TIE1P35590 1138 aa14.47□□□□□ -0.09
MDH1-216ENST00000544381 LHX8Q68G74 356 aa14.47□□□□□ -0.09
MDH1-216ENST00000544381 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
MDH1-216ENST00000544381 CEP152O94986 1710 aa14.47□□□□□ -0.09
MDH1-216ENST00000544381 TOM1O60784 492 aa14.46□□□□□ -0.09
MDH1-216ENST00000544381 ERVK-7P63135 1459 aa14.46□□□□□ -0.1
MDH1-216ENST00000544381 EIF2AK4Q9P2K8 1649 aaKnown RBP14.45□□□□□ -0.1
MDH1-216ENST00000544381 UNC13BO14795 1591 aa14.45□□□□□ -0.1
MDH1-216ENST00000544381 CFAP65Q6ZU64 1925 aaKnown RBP14.45□□□□□ -0.1
MDH1-216ENST00000544381 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
MDH1-216ENST00000544381 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
MDH1-216ENST00000544381 ANKLE2Q86XL3 938 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms