RNA–Protein interactions for RNA: ENST00000543997.1

NPIPB5-223, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 4

Gene NPIPB5, Length 573 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-223	ENST00000543997	IQGAP1	P46940	1657 aa		8.13	□□□□□ -1.11
NPIPB5-223	ENST00000543997	PROM2	Q8N271	834 aa		8.12	□□□□□ -1.11
NPIPB5-223	ENST00000543997	UGGT1	Q9NYU2	1555 aa		8.12	□□□□□ -1.11
NPIPB5-223	ENST00000543997	ARHGAP35	Q9NRY4	1499 aa		8.12	□□□□□ -1.11
NPIPB5-223	ENST00000543997	CDC42BPA	Q5VT25	1732 aa		8.12	□□□□□ -1.11
NPIPB5-223	ENST00000543997	MIA2	Q96PC5	1412 aa		8.12	□□□□□ -1.11
NPIPB5-223	ENST00000543997	ATN1	P54259	1190 aa	Predicted RBP	8.11	□□□□□ -1.11
NPIPB5-223	ENST00000543997	FBXO31	Q5XUX0	539 aa	Predicted RBP	8.11	□□□□□ -1.11
NPIPB5-223	ENST00000543997	KIF12	Q96FN5	646 aa		8.11	□□□□□ -1.11
NPIPB5-223	ENST00000543997	ATP1B4	Q9UN42	357 aa	Predicted RBP	8.11	□□□□□ -1.11
NPIPB5-223	ENST00000543997	PLEKHH2	Q8IVE3	1493 aa		8.11	□□□□□ -1.11
NPIPB5-223	ENST00000543997	KDM5D	Q9BY66	1539 aa		8.1	□□□□□ -1.11
NPIPB5-223	ENST00000543997	LRRIQ1	Q96JM4	1722 aa		8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	GPATCH8	Q9UKJ3	1502 aa	Known RBP	8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	ZC3H13	Q5T200	1668 aa	Known RBP	8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	ADGB	Q8N7X0	1667 aa		8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	CCDC18	Q5T9S5	1454 aa		8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	HNRNPM	P52272	730 aa	Known RBP eCLIP	8.09	□□□□□ -1.11
NPIPB5-223	ENST00000543997	FAM163A	Q96GL9	167 aa	Predicted RBP	8.08	□□□□□ -1.12
NPIPB5-223	ENST00000543997	DHX29	Q7Z478	1369 aa	Known RBP	8.08	□□□□□ -1.12
NPIPB5-223	ENST00000543997	RTEL1-TNFRSF6B	F6WH68	1400 aa		8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	PLEKHG5	O94827	1062 aa		8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	TIE1	P35590	1138 aa		8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	LCE2D	Q5TA82	110 aa	Predicted RBP	8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	BMP2K	Q9NSY1	1161 aa	Predicted RBP	8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	XIRP1	Q702N8	1843 aa	Known RBP	8.07	□□□□□ -1.12
NPIPB5-223	ENST00000543997	LRRC9	Q6ZRR7	1453 aa		8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	CDK12	Q9NYV4	1490 aa	Predicted RBP	8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	EHMT2	Q96KQ7	1210 aa		8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	JCAD	Q9P266	1359 aa		8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	SCAF11	Q99590	1463 aa	Known RBP	8.06	□□□□□ -1.12
NPIPB5-223	ENST00000543997	ROBO1	Q9Y6N7	1651 aa		8.05	□□□□□ -1.12
NPIPB5-223	ENST00000543997	CASKIN1	Q8WXD9	1431 aa		8.05	□□□□□ -1.12
NPIPB5-223	ENST00000543997	ARHGAP23	Q9P227	1491 aa		8.05	□□□□□ -1.12
NPIPB5-223	ENST00000543997	MBD5	Q9P267	1494 aa		8.05	□□□□□ -1.12
NPIPB5-223	ENST00000543997	MAP3K1	Q13233	1512 aa		8.04	□□□□□ -1.12
NPIPB5-223	ENST00000543997	ZNF772	Q68DY9	489 aa	Predicted RBP	8.04	□□□□□ -1.12
NPIPB5-223	ENST00000543997	WASHC2C	Q9Y4E1	1318 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	SLIT1	O75093	1534 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	LRP6	O75581	1613 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	TMEM94	Q12767	1356 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	POTEF	A5A3E0	1075 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	MAP3K13	O43283	966 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	CFDP1	Q9UEE9	299 aa	Predicted RBP	8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	SPATA31A6	Q5VVP1	1343 aa		8.03	□□□□□ -1.12
NPIPB5-223	ENST00000543997	NCOA2	Q15596	1464 aa		8.02	□□□□□ -1.13
NPIPB5-223	ENST00000543997	KIF3B	O15066	747 aa		8.02	□□□□□ -1.13
NPIPB5-223	ENST00000543997	FGD6	Q6ZV73	1430 aa		8.02	□□□□□ -1.13
NPIPB5-223	ENST00000543997	ERVK-7	P63135	1459 aa		8.01	□□□□□ -1.13
NPIPB5-223	ENST00000543997	LTK	P29376	864 aa		8.01	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TRIM52	Q96A61	297 aa		8.01	□□□□□ -1.13
NPIPB5-223	ENST00000543997	CAMSAP2	Q08AD1	1489 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	FYCO1	Q9BQS8	1478 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	COL16A1	Q07092	1604 aa	Predicted RBP	8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	SEC24B	O95487	1268 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	RXRB	P28702	533 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	SGIP1	Q9BQI5	828 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TRPC6	Q9Y210	931 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	UBR1	Q8IWV7	1749 aa		8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	NKTR	P30414	1462 aa	Known RBP	8	□□□□□ -1.13
NPIPB5-223	ENST00000543997	CCNB3	Q8WWL7	1395 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	ABCC3	O15438	1527 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	PRDM15	P57071	1507 aa	Predicted RBP	7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TTLL13P	A6NNM8	815 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	PHLPP1	O60346	1717 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	KCNA6	P17658	529 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	IER5L	Q5T953	404 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	MIER1	Q8N108	512 aa		7.99	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TIAM1	Q13009	1591 aa		7.98	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TXNDC2	Q86VQ3	553 aa		7.98	□□□□□ -1.13
NPIPB5-223	ENST00000543997	RASEF	Q8IZ41	740 aa		7.98	□□□□□ -1.13
NPIPB5-223	ENST00000543997	ZNF644	Q9H582	1327 aa	Predicted RBP	7.98	□□□□□ -1.13
NPIPB5-223	ENST00000543997	NWD1	Q149M9	1564 aa		7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	UBTF	P17480	764 aa	Known RBP	7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	SLAIN2	Q9P270	581 aa		7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	CCDC141	Q6ZP82	1450 aa		7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	MSH6	P52701	1360 aa		7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	TMEM2	Q9UHN6	1383 aa		7.97	□□□□□ -1.13
NPIPB5-223	ENST00000543997	RGS12	O14924	1447 aa		7.96	□□□□□ -1.13
NPIPB5-223	ENST00000543997	SHPRH	Q149N8	1683 aa		7.96	□□□□□ -1.13
NPIPB5-223	ENST00000543997	MEX3C	Q5U5Q3	659 aa	Known RBP	7.96	□□□□□ -1.14
NPIPB5-223	ENST00000543997	COLQ	Q9Y215	455 aa	Predicted RBP	7.96	□□□□□ -1.14
NPIPB5-223	ENST00000543997	EID1	Q9Y6B2	187 aa		7.96	□□□□□ -1.14
NPIPB5-223	ENST00000543997	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.96	□□□□□ -1.14
NPIPB5-223	ENST00000543997	TET3	O43151	1660 aa		7.95	□□□□□ -1.14
NPIPB5-223	ENST00000543997	PROSER2	Q86WR7	435 aa	Predicted RBP	7.95	□□□□□ -1.14
NPIPB5-223	ENST00000543997	EP400	Q96L91	3159 aa		7.95	□□□□□ -1.14
NPIPB5-223	ENST00000543997	ARHGAP31	Q2M1Z3	1444 aa		7.95	□□□□□ -1.14
NPIPB5-223	ENST00000543997	RSPH4A	Q5TD94	716 aa		7.94	□□□□□ -1.14
NPIPB5-223	ENST00000543997	TRIM35	Q9UPQ4	493 aa		7.94	□□□□□ -1.14
NPIPB5-223	ENST00000543997	NCOA3	Q9Y6Q9	1424 aa		7.94	□□□□□ -1.14
NPIPB5-223	ENST00000543997	DIP2A	Q14689	1571 aa		7.93	□□□□□ -1.14
NPIPB5-223	ENST00000543997	SETBP1	Q9Y6X0	1596 aa		7.93	□□□□□ -1.14
NPIPB5-223	ENST00000543997	MROH1	Q8NDA8	1641 aa		7.93	□□□□□ -1.14
NPIPB5-223	ENST00000543997	KDM5A	P29375	1690 aa	Known RBP	7.92	□□□□□ -1.14
NPIPB5-223	ENST00000543997	RBM6	P78332	1123 aa	Known RBP	7.92	□□□□□ -1.14
NPIPB5-223	ENST00000543997	CDAN1	Q8IWY9	1227 aa		7.92	□□□□□ -1.14
NPIPB5-223	ENST00000543997	RBM33	Q96EV2	1170 aa	Known RBP	7.92	□□□□□ -1.14
NPIPB5-223	ENST00000543997	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.92	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms