RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
MRPL48-212ENST00000543374 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
MRPL48-212ENST00000543374 COPS2P61201 443 aa12.31□□□□□ -0.44
MRPL48-212ENST00000543374 HIC1Q14526 733 aa12.31□□□□□ -0.44
MRPL48-212ENST00000543374 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
MRPL48-212ENST00000543374 ZPR1O75312 459 aa12.3□□□□□ -0.44
MRPL48-212ENST00000543374 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
MRPL48-212ENST00000543374 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
MRPL48-212ENST00000543374 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
MRPL48-212ENST00000543374 PRKD2Q9BZL6 878 aa12.29□□□□□ -0.44
MRPL48-212ENST00000543374 Q6ZNB5 142 aa12.27□□□□□ -0.45
MRPL48-212ENST00000543374 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
MRPL48-212ENST00000543374 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
MRPL48-212ENST00000543374 GFRA3O60609 400 aa12.24□□□□□ -0.45
MRPL48-212ENST00000543374 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
MRPL48-212ENST00000543374 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
MRPL48-212ENST00000543374 GNPATO15228 680 aa12.21□□□□□ -0.45
MRPL48-212ENST00000543374 CFHP08603 1231 aa12.21□□□□□ -0.45
MRPL48-212ENST00000543374 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
MRPL48-212ENST00000543374 BLOC1S3Q6QNY0 202 aa12.21□□□□□ -0.45
MRPL48-212ENST00000543374 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
MRPL48-212ENST00000543374 METTL3Q86U44 580 aaKnown RBP12.2□□□□□ -0.46
MRPL48-212ENST00000543374 NR1I2O75469 434 aa12.19□□□□□ -0.46
MRPL48-212ENST00000543374 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
MRPL48-212ENST00000543374 SLC10A3P09131 477 aa12.16□□□□□ -0.46
MRPL48-212ENST00000543374 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
MRPL48-212ENST00000543374 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
MRPL48-212ENST00000543374 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
MRPL48-212ENST00000543374 TRAF7Q6Q0C0 670 aa12.12□□□□□ -0.47
MRPL48-212ENST00000543374 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
MRPL48-212ENST00000543374 SLC19A1P41440 591 aa12.11□□□□□ -0.47
MRPL48-212ENST00000543374 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
MRPL48-212ENST00000543374 ADH1BP00325 375 aa12.1□□□□□ -0.47
MRPL48-212ENST00000543374 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
MRPL48-212ENST00000543374 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
MRPL48-212ENST00000543374 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
MRPL48-212ENST00000543374 GPR37O15354 613 aa12.08□□□□□ -0.48
MRPL48-212ENST00000543374 FECHP22830 423 aa12.08□□□□□ -0.48
MRPL48-212ENST00000543374 TLL1O43897 1013 aa12.07□□□□□ -0.48
MRPL48-212ENST00000543374 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
MRPL48-212ENST00000543374 RDH13Q8NBN7 331 aa12.07□□□□□ -0.48
MRPL48-212ENST00000543374 S1PR4O95977 384 aa12.06□□□□□ -0.48
MRPL48-212ENST00000543374 SLC6A16Q9GZN6 736 aa12.06□□□□□ -0.48
MRPL48-212ENST00000543374 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
MRPL48-212ENST00000543374 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
MRPL48-212ENST00000543374 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
MRPL48-212ENST00000543374 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
MRPL48-212ENST00000543374 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
MRPL48-212ENST00000543374 SPSB2Q99619 263 aa12.03□□□□□ -0.48
MRPL48-212ENST00000543374 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
MRPL48-212ENST00000543374 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
MRPL48-212ENST00000543374 GCGRP47871 477 aa12□□□□□ -0.49
MRPL48-212ENST00000543374 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
MRPL48-212ENST00000543374 MORN1Q5T089 497 aa11.99□□□□□ -0.49
MRPL48-212ENST00000543374 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
MRPL48-212ENST00000543374 PRR20EP86478 221 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 PRR20CP86479 221 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 PRR20DP86480 221 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 PRR20BP86481 221 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 PRR20AP86496 221 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 FUT2Q10981 343 aa11.98□□□□□ -0.49
MRPL48-212ENST00000543374 FMNL1O95466 1100 aaPredicted RBP11.97□□□□□ -0.49
MRPL48-212ENST00000543374 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
MRPL48-212ENST00000543374 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
MRPL48-212ENST00000543374 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
MRPL48-212ENST00000543374 PHOX2BQ99453 314 aa11.96□□□□□ -0.49
MRPL48-212ENST00000543374 LCE2BO14633 110 aa11.95□□□□□ -0.5
MRPL48-212ENST00000543374 ZNF697Q5TEC3 545 aa11.95□□□□□ -0.5
MRPL48-212ENST00000543374 DGAT1O75907 488 aa11.93□□□□□ -0.5
MRPL48-212ENST00000543374 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
MRPL48-212ENST00000543374 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
MRPL48-212ENST00000543374 THAP11Q96EK4 314 aa11.93□□□□□ -0.5
MRPL48-212ENST00000543374 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
MRPL48-212ENST00000543374 IRF6O14896 467 aa11.92□□□□□ -0.5
MRPL48-212ENST00000543374 RPIAP49247 311 aa11.92□□□□□ -0.5
MRPL48-212ENST00000543374 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
MRPL48-212ENST00000543374 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
MRPL48-212ENST00000543374 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
MRPL48-212ENST00000543374 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
MRPL48-212ENST00000543374 Q3C1V9 767 aa11.9□□□□□ -0.5
MRPL48-212ENST00000543374 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
MRPL48-212ENST00000543374 GDF9O60383 454 aa11.88□□□□□ -0.51
MRPL48-212ENST00000543374 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
MRPL48-212ENST00000543374 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
MRPL48-212ENST00000543374 CD46P15529 392 aa11.86□□□□□ -0.51
MRPL48-212ENST00000543374 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
MRPL48-212ENST00000543374 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
MRPL48-212ENST00000543374 USP46P62068 366 aa11.85□□□□□ -0.51
MRPL48-212ENST00000543374 FCF1Q9Y324 198 aaKnown RBP11.85□□□□□ -0.51
MRPL48-212ENST00000543374 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
MRPL48-212ENST00000543374 KDM4AO75164 1064 aa11.84□□□□□ -0.51
MRPL48-212ENST00000543374 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
MRPL48-212ENST00000543374 MYT1Q01538 1121 aa11.82□□□□□ -0.52
MRPL48-212ENST00000543374 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
MRPL48-212ENST00000543374 CLCN1P35523 988 aa11.81□□□□□ -0.52
MRPL48-212ENST00000543374 MDM2Q00987 491 aaPredicted RBP11.81□□□□□ -0.52
MRPL48-212ENST00000543374 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
MRPL48-212ENST00000543374 FOXC1Q12948 553 aa11.79□□□□□ -0.52
MRPL48-212ENST00000543374 RNF19BQ6ZMZ0 732 aa11.79□□□□□ -0.52
MRPL48-212ENST00000543374 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms