RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
PTCD2-212ENST00000543322 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
PTCD2-212ENST00000543322 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
PTCD2-212ENST00000543322 PIK3C2GO75747 1445 aa17.08■□□□□ 0.32
PTCD2-212ENST00000543322 EFCAB2Q5VUJ9 269 aa17.06■□□□□ 0.32
PTCD2-212ENST00000543322 KDM5AP29375 1690 aaKnown RBP17.06■□□□□ 0.32
PTCD2-212ENST00000543322 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
PTCD2-212ENST00000543322 PLIN1O60240 522 aa17.06■□□□□ 0.32
PTCD2-212ENST00000543322 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
PTCD2-212ENST00000543322 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-212ENST00000543322 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
PTCD2-212ENST00000543322 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
PTCD2-212ENST00000543322 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
PTCD2-212ENST00000543322 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
PTCD2-212ENST00000543322 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
PTCD2-212ENST00000543322 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
PTCD2-212ENST00000543322 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
PTCD2-212ENST00000543322 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
PTCD2-212ENST00000543322 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
PTCD2-212ENST00000543322 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
PTCD2-212ENST00000543322 NPM2Q86SE8 214 aaKnown RBP17.02■□□□□ 0.32
PTCD2-212ENST00000543322 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
PTCD2-212ENST00000543322 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
PTCD2-212ENST00000543322 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTCD2-212ENST00000543322 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
PTCD2-212ENST00000543322 ABCA9Q8IUA7 1624 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 MYOM2P54296 1465 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 ATP7AQ04656 1500 aa16.99■□□□□ 0.31
PTCD2-212ENST00000543322 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
PTCD2-212ENST00000543322 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
PTCD2-212ENST00000543322 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
PTCD2-212ENST00000543322 GOLGA2Q08379 1002 aa16.96■□□□□ 0.3
PTCD2-212ENST00000543322 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
PTCD2-212ENST00000543322 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
PTCD2-212ENST00000543322 DDRGK1Q96HY6 314 aa16.94■□□□□ 0.3
PTCD2-212ENST00000543322 KIF1BO60333 1816 aa16.94■□□□□ 0.3
PTCD2-212ENST00000543322 KANK1Q14678 1352 aa16.94■□□□□ 0.3
PTCD2-212ENST00000543322 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
PTCD2-212ENST00000543322 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
PTCD2-212ENST00000543322 SKAP1Q86WV1 359 aa16.93■□□□□ 0.3
PTCD2-212ENST00000543322 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.92■□□□□ 0.3
PTCD2-212ENST00000543322 MROH2AA6NES4 1674 aa16.92■□□□□ 0.3
PTCD2-212ENST00000543322 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
PTCD2-212ENST00000543322 EFCAB6Q5THR3 1501 aa16.92■□□□□ 0.3
PTCD2-212ENST00000543322 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
PTCD2-212ENST00000543322 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
PTCD2-212ENST00000543322 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
PTCD2-212ENST00000543322 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
PTCD2-212ENST00000543322 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
PTCD2-212ENST00000543322 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
PTCD2-212ENST00000543322 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
PTCD2-212ENST00000543322 FANCAO15360 1455 aa16.89■□□□□ 0.29
PTCD2-212ENST00000543322 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
PTCD2-212ENST00000543322 PPRC1Q5VV67 1664 aaKnown RBP16.88■□□□□ 0.29
PTCD2-212ENST00000543322 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
PTCD2-212ENST00000543322 SETBP1Q9Y6X0 1596 aa16.88■□□□□ 0.29
PTCD2-212ENST00000543322 NEFMP07197 916 aa16.87■□□□□ 0.29
PTCD2-212ENST00000543322 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
PTCD2-212ENST00000543322 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
PTCD2-212ENST00000543322 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
PTCD2-212ENST00000543322 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
PTCD2-212ENST00000543322 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
PTCD2-212ENST00000543322 C8orf34Q49A92 452 aa16.86■□□□□ 0.29
PTCD2-212ENST00000543322 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
PTCD2-212ENST00000543322 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
PTCD2-212ENST00000543322 E9PSI1 815 aa16.84■□□□□ 0.29
PTCD2-212ENST00000543322 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
PTCD2-212ENST00000543322 POLR3AO14802 1390 aaPredicted RBP16.84■□□□□ 0.29
PTCD2-212ENST00000543322 APAF1O14727 1248 aa16.84■□□□□ 0.29
PTCD2-212ENST00000543322 KIDINS220Q9ULH0 1771 aa16.83■□□□□ 0.29
PTCD2-212ENST00000543322 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.29
PTCD2-212ENST00000543322 USP32Q8NFA0 1604 aa16.83■□□□□ 0.28
PTCD2-212ENST00000543322 ADGRF5Q8IZF2 1346 aa16.83■□□□□ 0.28
PTCD2-212ENST00000543322 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
PTCD2-212ENST00000543322 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
PTCD2-212ENST00000543322 KIF3BO15066 747 aa16.82■□□□□ 0.28
PTCD2-212ENST00000543322 PPLO60437 1756 aa16.82■□□□□ 0.28
PTCD2-212ENST00000543322 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
PTCD2-212ENST00000543322 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
PTCD2-212ENST00000543322 BCAR3O75815 825 aa16.78■□□□□ 0.28
PTCD2-212ENST00000543322 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
PTCD2-212ENST00000543322 ADGRB1O14514 1584 aa16.77■□□□□ 0.28
PTCD2-212ENST00000543322 NOS1P29475 1434 aa16.77■□□□□ 0.27
PTCD2-212ENST00000543322 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
PTCD2-212ENST00000543322 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
PTCD2-212ENST00000543322 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
PTCD2-212ENST00000543322 CENPJQ9HC77 1338 aaPredicted RBP16.75■□□□□ 0.27
PTCD2-212ENST00000543322 RGS3P49796 1198 aa16.74■□□□□ 0.27
PTCD2-212ENST00000543322 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
PTCD2-212ENST00000543322 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
PTCD2-212ENST00000543322 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
PTCD2-212ENST00000543322 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
PTCD2-212ENST00000543322 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
PTCD2-212ENST00000543322 SLC4A3P48751 1232 aa16.72■□□□□ 0.27
PTCD2-212ENST00000543322 IGHDP01880 384 aa16.71■□□□□ 0.27
PTCD2-212ENST00000543322 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms