RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 IQGAP1P46940 1657 aa8.13□□□□□ -1.11
NPIPB3-211ENST00000542953 PROM2Q8N271 834 aa8.12□□□□□ -1.11
NPIPB3-211ENST00000542953 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
NPIPB3-211ENST00000542953 ARHGAP35Q9NRY4 1499 aa8.12□□□□□ -1.11
NPIPB3-211ENST00000542953 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
NPIPB3-211ENST00000542953 MIA2Q96PC5 1412 aa8.12□□□□□ -1.11
NPIPB3-211ENST00000542953 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-211ENST00000542953 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-211ENST00000542953 KIF12Q96FN5 646 aa8.11□□□□□ -1.11
NPIPB3-211ENST00000542953 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
NPIPB3-211ENST00000542953 PLEKHH2Q8IVE3 1493 aa8.11□□□□□ -1.11
NPIPB3-211ENST00000542953 KDM5DQ9BY66 1539 aa8.1□□□□□ -1.11
NPIPB3-211ENST00000542953 LRRIQ1Q96JM4 1722 aa8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 GPATCH8Q9UKJ3 1502 aaKnown RBP8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 HNRNPMP52272 730 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPIPB3-211ENST00000542953 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
NPIPB3-211ENST00000542953 DHX29Q7Z478 1369 aaKnown RBP8.08□□□□□ -1.12
NPIPB3-211ENST00000542953 RTEL1-TNFRSF6BF6WH68 1400 aa8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 TIE1P35590 1138 aa8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 BMP2KQ9NSY1 1161 aaPredicted RBP8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 XIRP1Q702N8 1843 aaKnown RBP8.07□□□□□ -1.12
NPIPB3-211ENST00000542953 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 ZNF777Q9ULD5 760 aaPredicted RBP8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 JCADQ9P266 1359 aa8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 SCAF11Q99590 1463 aaKnown RBP8.06□□□□□ -1.12
NPIPB3-211ENST00000542953 ROBO1Q9Y6N7 1651 aa8.05□□□□□ -1.12
NPIPB3-211ENST00000542953 CASKIN1Q8WXD9 1431 aa8.05□□□□□ -1.12
NPIPB3-211ENST00000542953 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
NPIPB3-211ENST00000542953 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
NPIPB3-211ENST00000542953 MAP3K1Q13233 1512 aa8.04□□□□□ -1.12
NPIPB3-211ENST00000542953 ZNF772Q68DY9 489 aaPredicted RBP8.04□□□□□ -1.12
NPIPB3-211ENST00000542953 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 SLIT1O75093 1534 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 LRP6O75581 1613 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 TMEM94Q12767 1356 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 MAP3K13O43283 966 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 CFDP1Q9UEE9 299 aaPredicted RBP8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
NPIPB3-211ENST00000542953 NCOA2Q15596 1464 aa8.02□□□□□ -1.13
NPIPB3-211ENST00000542953 KIF3BO15066 747 aa8.02□□□□□ -1.13
NPIPB3-211ENST00000542953 FGD6Q6ZV73 1430 aa8.02□□□□□ -1.13
NPIPB3-211ENST00000542953 ERVK-7P63135 1459 aa8.01□□□□□ -1.13
NPIPB3-211ENST00000542953 LTKP29376 864 aa8.01□□□□□ -1.13
NPIPB3-211ENST00000542953 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
NPIPB3-211ENST00000542953 CAMSAP2Q08AD1 1489 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 FYCO1Q9BQS8 1478 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 COL16A1Q07092 1604 aaPredicted RBP8□□□□□ -1.13
NPIPB3-211ENST00000542953 SEC24BO95487 1268 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 RXRBP28702 533 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 SGIP1Q9BQI5 828 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 TRPC6Q9Y210 931 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
NPIPB3-211ENST00000542953 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
NPIPB3-211ENST00000542953 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 ABCC3O15438 1527 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 PRDM15P57071 1507 aaPredicted RBP7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 PHLPP1O60346 1717 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 KCNA6P17658 529 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 IER5LQ5T953 404 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 MIER1Q8N108 512 aa7.99□□□□□ -1.13
NPIPB3-211ENST00000542953 TIAM1Q13009 1591 aa7.98□□□□□ -1.13
NPIPB3-211ENST00000542953 TXNDC2Q86VQ3 553 aa7.98□□□□□ -1.13
NPIPB3-211ENST00000542953 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
NPIPB3-211ENST00000542953 ZNF644Q9H582 1327 aaPredicted RBP7.98□□□□□ -1.13
NPIPB3-211ENST00000542953 NWD1Q149M9 1564 aa7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 SLAIN2Q9P270 581 aa7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 CCDC141Q6ZP82 1450 aa7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 MSH6P52701 1360 aa7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 TMEM2Q9UHN6 1383 aa7.97□□□□□ -1.13
NPIPB3-211ENST00000542953 RGS12O14924 1447 aa7.96□□□□□ -1.13
NPIPB3-211ENST00000542953 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
NPIPB3-211ENST00000542953 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
NPIPB3-211ENST00000542953 COLQQ9Y215 455 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-211ENST00000542953 EID1Q9Y6B2 187 aa7.96□□□□□ -1.14
NPIPB3-211ENST00000542953 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-211ENST00000542953 TET3O43151 1660 aa7.95□□□□□ -1.14
NPIPB3-211ENST00000542953 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
NPIPB3-211ENST00000542953 EP400Q96L91 3159 aa7.95□□□□□ -1.14
NPIPB3-211ENST00000542953 ARHGAP31Q2M1Z3 1444 aa7.95□□□□□ -1.14
NPIPB3-211ENST00000542953 RSPH4AQ5TD94 716 aa7.94□□□□□ -1.14
NPIPB3-211ENST00000542953 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
NPIPB3-211ENST00000542953 NCOA3Q9Y6Q9 1424 aa7.94□□□□□ -1.14
NPIPB3-211ENST00000542953 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
NPIPB3-211ENST00000542953 SETBP1Q9Y6X0 1596 aa7.93□□□□□ -1.14
NPIPB3-211ENST00000542953 MROH1Q8NDA8 1641 aa7.93□□□□□ -1.14
NPIPB3-211ENST00000542953 KDM5AP29375 1690 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-211ENST00000542953 RBM6P78332 1123 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-211ENST00000542953 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
NPIPB3-211ENST00000542953 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-211ENST00000542953 ZBTB47Q9UFB7 747 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms