RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
NPIPB4-215ENST00000542133 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
NPIPB4-215ENST00000542133 SHPRHQ149N8 1683 aa12.43□□□□□ -0.42
NPIPB4-215ENST00000542133 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
NPIPB4-215ENST00000542133 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
NPIPB4-215ENST00000542133 CFAP65Q6ZU64 1925 aaKnown RBP12.43□□□□□ -0.42
NPIPB4-215ENST00000542133 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
NPIPB4-215ENST00000542133 TET3O43151 1660 aa12.42□□□□□ -0.42
NPIPB4-215ENST00000542133 KDM5AP29375 1690 aaKnown RBP12.42□□□□□ -0.42
NPIPB4-215ENST00000542133 KCNA6P17658 529 aa12.42□□□□□ -0.42
NPIPB4-215ENST00000542133 ZNF772Q68DY9 489 aaPredicted RBP12.42□□□□□ -0.42
NPIPB4-215ENST00000542133 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 MSH6P52701 1360 aa12.41□□□□□ -0.42
NPIPB4-215ENST00000542133 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
NPIPB4-215ENST00000542133 ABCB7O75027 752 aa12.4□□□□□ -0.42
NPIPB4-215ENST00000542133 EFCAB6Q5THR3 1501 aa12.4□□□□□ -0.42
NPIPB4-215ENST00000542133 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
NPIPB4-215ENST00000542133 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
NPIPB4-215ENST00000542133 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
NPIPB4-215ENST00000542133 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
NPIPB4-215ENST00000542133 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
NPIPB4-215ENST00000542133 RXRBP28702 533 aa12.37□□□□□ -0.43
NPIPB4-215ENST00000542133 RGS12O14924 1447 aa12.37□□□□□ -0.43
NPIPB4-215ENST00000542133 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
NPIPB4-215ENST00000542133 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
NPIPB4-215ENST00000542133 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
NPIPB4-215ENST00000542133 TSPY4P0CV99 314 aa12.35□□□□□ -0.43
NPIPB4-215ENST00000542133 TSPY10P0CW01 314 aa12.35□□□□□ -0.43
NPIPB4-215ENST00000542133 ADGRB3O60242 1522 aa12.34□□□□□ -0.43
NPIPB4-215ENST00000542133 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
NPIPB4-215ENST00000542133 CHD2O14647 1828 aaKnown RBP12.33□□□□□ -0.44
NPIPB4-215ENST00000542133 ARXQ96QS3 562 aa12.32□□□□□ -0.44
NPIPB4-215ENST00000542133 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
NPIPB4-215ENST00000542133 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
NPIPB4-215ENST00000542133 AFF2P51816 1311 aa12.3□□□□□ -0.44
NPIPB4-215ENST00000542133 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
NPIPB4-215ENST00000542133 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
NPIPB4-215ENST00000542133 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
NPIPB4-215ENST00000542133 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
NPIPB4-215ENST00000542133 IDI1Q13907 227 aa12.27□□□□□ -0.45
NPIPB4-215ENST00000542133 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
NPIPB4-215ENST00000542133 ZFYVE9O95405 1425 aa12.27□□□□□ -0.45
NPIPB4-215ENST00000542133 NOS1P29475 1434 aa12.27□□□□□ -0.45
NPIPB4-215ENST00000542133 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 CROCC2H7BZ55 1655 aa12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 NUTM2BA6NNL0 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 NUTM2EB1AL46 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 NUTM2AQ8IVF1 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
NPIPB4-215ENST00000542133 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
NPIPB4-215ENST00000542133 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
NPIPB4-215ENST00000542133 SETD5Q9C0A6 1442 aa12.25□□□□□ -0.45
NPIPB4-215ENST00000542133 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
NPIPB4-215ENST00000542133 NUTM2DQ5VT03 806 aaPredicted RBP12.24□□□□□ -0.45
NPIPB4-215ENST00000542133 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
NPIPB4-215ENST00000542133 MYO5BQ9ULV0 1848 aa12.24□□□□□ -0.45
NPIPB4-215ENST00000542133 GCC2Q8IWJ2 1684 aa12.23□□□□□ -0.45
NPIPB4-215ENST00000542133 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
NPIPB4-215ENST00000542133 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
NPIPB4-215ENST00000542133 BCANQ96GW7 911 aa12.23□□□□□ -0.45
NPIPB4-215ENST00000542133 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
NPIPB4-215ENST00000542133 EP400Q96L91 3159 aa12.22□□□□□ -0.45
NPIPB4-215ENST00000542133 MYOM3Q5VTT5 1437 aa12.22□□□□□ -0.45
NPIPB4-215ENST00000542133 KANK1Q14678 1352 aa12.22□□□□□ -0.45
NPIPB4-215ENST00000542133 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
NPIPB4-215ENST00000542133 ATF3P18847 181 aa12.21□□□□□ -0.45
NPIPB4-215ENST00000542133 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
NPIPB4-215ENST00000542133 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NPIPB4-215ENST00000542133 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
NPIPB4-215ENST00000542133 DCCP43146 1447 aa12.2□□□□□ -0.46
NPIPB4-215ENST00000542133 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
NPIPB4-215ENST00000542133 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
NPIPB4-215ENST00000542133 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
NPIPB4-215ENST00000542133 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
NPIPB4-215ENST00000542133 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
NPIPB4-215ENST00000542133 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
NPIPB4-215ENST00000542133 SLC52A1Q9NWF4 448 aa12.18□□□□□ -0.46
NPIPB4-215ENST00000542133 MST1RQ04912 1400 aa12.18□□□□□ -0.46
NPIPB4-215ENST00000542133 LRP5O75197 1615 aa12.18□□□□□ -0.46
NPIPB4-215ENST00000542133 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
NPIPB4-215ENST00000542133 ABCC5O15440 1437 aa12.17□□□□□ -0.46
NPIPB4-215ENST00000542133 TRPM2O94759 1503 aa12.16□□□□□ -0.46
NPIPB4-215ENST00000542133 RPRD2Q5VT52 1461 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-215ENST00000542133 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
NPIPB4-215ENST00000542133 XRN1Q8IZH2 1706 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-215ENST00000542133 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
NPIPB4-215ENST00000542133 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
NPIPB4-215ENST00000542133 POLA2Q14181 598 aa12.14□□□□□ -0.47
NPIPB4-215ENST00000542133 UNC13BO14795 1591 aa12.13□□□□□ -0.47
NPIPB4-215ENST00000542133 ATRNO75882 1429 aa12.13□□□□□ -0.47
NPIPB4-215ENST00000542133 DAPK1P53355 1430 aa12.13□□□□□ -0.47
NPIPB4-215ENST00000542133 LAMC1P11047 1609 aa12.13□□□□□ -0.47
NPIPB4-215ENST00000542133 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
NPIPB4-215ENST00000542133 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms