RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 WDR7Q9Y4E6 1490 aa8.93□□□□□ -0.98
NKRF-204ENST00000542113 TET3O43151 1660 aa8.93□□□□□ -0.98
NKRF-204ENST00000542113 ASXL1Q8IXJ9 1541 aa8.93□□□□□ -0.98
NKRF-204ENST00000542113 ZFYVE16Q7Z3T8 1539 aa8.92□□□□□ -0.98
NKRF-204ENST00000542113 DEPDC5O75140 1603 aa8.92□□□□□ -0.98
NKRF-204ENST00000542113 DDRGK1Q96HY6 314 aa8.92□□□□□ -0.98
NKRF-204ENST00000542113 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
NKRF-204ENST00000542113 TRAPPC8Q9Y2L5 1435 aa8.91□□□□□ -0.98
NKRF-204ENST00000542113 PDE4AP27815 886 aa8.91□□□□□ -0.98
NKRF-204ENST00000542113 BACH2Q9BYV9 841 aa8.9□□□□□ -0.98
NKRF-204ENST00000542113 PPP2R1AP30153 589 aa8.9□□□□□ -0.98
NKRF-204ENST00000542113 DEKP35659 375 aaKnown RBP8.9□□□□□ -0.98
NKRF-204ENST00000542113 MYOM2P54296 1465 aa8.9□□□□□ -0.98
NKRF-204ENST00000542113 USP35Q9P2H5 1018 aa8.9□□□□□ -0.99
NKRF-204ENST00000542113 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
NKRF-204ENST00000542113 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
NKRF-204ENST00000542113 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
NKRF-204ENST00000542113 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
NKRF-204ENST00000542113 CENPQQ7L2Z9 268 aaPredicted RBP8.89□□□□□ -0.99
NKRF-204ENST00000542113 VWDEQ8N2E2 1590 aa8.89□□□□□ -0.99
NKRF-204ENST00000542113 PPM1GO15355 546 aaPredicted RBP8.89□□□□□ -0.99
NKRF-204ENST00000542113 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
NKRF-204ENST00000542113 ATP7AQ04656 1500 aa8.88□□□□□ -0.99
NKRF-204ENST00000542113 CLTCL1P53675 1640 aa8.88□□□□□ -0.99
NKRF-204ENST00000542113 ADAMTS8Q9UP79 889 aa8.88□□□□□ -0.99
NKRF-204ENST00000542113 ERCC6L2Q5T890 1561 aa8.88□□□□□ -0.99
NKRF-204ENST00000542113 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
NKRF-204ENST00000542113 CRBNQ96SW2 442 aa8.88□□□□□ -0.99
NKRF-204ENST00000542113 NBR1Q14596 966 aa8.87□□□□□ -0.99
NKRF-204ENST00000542113 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
NKRF-204ENST00000542113 NINLQ9Y2I6 1382 aa8.87□□□□□ -0.99
NKRF-204ENST00000542113 ABCA9Q8IUA7 1624 aa8.86□□□□□ -0.99
NKRF-204ENST00000542113 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
NKRF-204ENST00000542113 DUSP27Q5VZP5 1158 aa8.86□□□□□ -0.99
NKRF-204ENST00000542113 MAP3K4Q9Y6R4 1608 aa8.86□□□□□ -0.99
NKRF-204ENST00000542113 FANCAO15360 1455 aa8.86□□□□□ -0.99
NKRF-204ENST00000542113 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
NKRF-204ENST00000542113 MYOM1P52179 1685 aa8.85□□□□□ -0.99
NKRF-204ENST00000542113 PLEKHH1Q9ULM0 1364 aa8.85□□□□□ -0.99
NKRF-204ENST00000542113 E9PSI1 815 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 NKTRP30414 1462 aaKnown RBP8.84□□□□□ -0.99
NKRF-204ENST00000542113 ADGRL1O94910 1474 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 EFCAB6Q5THR3 1501 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 LMTK2Q8IWU2 1503 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 KDM2BQ8NHM5 1336 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 PLIN1O60240 522 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 SLFN5Q08AF3 891 aa8.84□□□□□ -0.99
NKRF-204ENST00000542113 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
NKRF-204ENST00000542113 MYO3AQ8NEV4 1616 aa8.83□□□□□ -1
NKRF-204ENST00000542113 AFAP1Q8N556 730 aa8.83□□□□□ -1
NKRF-204ENST00000542113 KIF1BO60333 1816 aa8.83□□□□□ -1
NKRF-204ENST00000542113 SETBP1Q9Y6X0 1596 aa8.83□□□□□ -1
NKRF-204ENST00000542113 KIF3BO15066 747 aa8.82□□□□□ -1
NKRF-204ENST00000542113 AAMPQ13685 434 aa8.82□□□□□ -1
NKRF-204ENST00000542113 ABCA6Q8N139 1617 aa8.82□□□□□ -1
NKRF-204ENST00000542113 FAM161AQ3B820 660 aa8.82□□□□□ -1
NKRF-204ENST00000542113 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
NKRF-204ENST00000542113 ERVK-7P63135 1459 aa8.82□□□□□ -1
NKRF-204ENST00000542113 NRXN1Q9ULB1 1477 aa8.82□□□□□ -1
NKRF-204ENST00000542113 POLR3AO14802 1390 aaPredicted RBP8.82□□□□□ -1
NKRF-204ENST00000542113 CGNL1Q0VF96 1302 aa8.81□□□□□ -1
NKRF-204ENST00000542113 IFT172Q9UG01 1749 aa8.8□□□□□ -1
NKRF-204ENST00000542113 ZNF518AQ6AHZ1 1483 aa8.8□□□□□ -1
NKRF-204ENST00000542113 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
NKRF-204ENST00000542113 PDE3AQ14432 1141 aa8.8□□□□□ -1
NKRF-204ENST00000542113 CFAP74Q9C0B2 1584 aa8.8□□□□□ -1
NKRF-204ENST00000542113 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
NKRF-204ENST00000542113 RPGRIP1LQ68CZ1 1315 aa8.79□□□□□ -1
NKRF-204ENST00000542113 ADGRB3O60242 1522 aa8.79□□□□□ -1
NKRF-204ENST00000542113 NEFMP07197 916 aa8.79□□□□□ -1
NKRF-204ENST00000542113 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
NKRF-204ENST00000542113 APAF1O14727 1248 aa8.79□□□□□ -1
NKRF-204ENST00000542113 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
NKRF-204ENST00000542113 C20orf194Q5TEA3 1177 aa8.78□□□□□ -1
NKRF-204ENST00000542113 PUS7Q96PZ0 661 aaKnown RBP8.78□□□□□ -1
NKRF-204ENST00000542113 MAPK8IP3Q9UPT6 1336 aa8.78□□□□□ -1
NKRF-204ENST00000542113 CFAP53Q96M91 514 aa8.78□□□□□ -1
NKRF-204ENST00000542113 USP32Q8NFA0 1604 aa8.77□□□□□ -1
NKRF-204ENST00000542113 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
NKRF-204ENST00000542113 NSD2O96028 1365 aa8.77□□□□□ -1.01
NKRF-204ENST00000542113 PPRC1Q5VV67 1664 aaKnown RBP8.77□□□□□ -1.01
NKRF-204ENST00000542113 ADGRF5Q8IZF2 1346 aa8.77□□□□□ -1.01
NKRF-204ENST00000542113 ZMYM3Q14202 1370 aa8.76□□□□□ -1.01
NKRF-204ENST00000542113 CCDC146Q8IYE0 955 aa8.76□□□□□ -1.01
NKRF-204ENST00000542113 MORC1Q86VD1 984 aa8.76□□□□□ -1.01
NKRF-204ENST00000542113 LAS1LQ9Y4W2 734 aaKnown RBP8.76□□□□□ -1.01
NKRF-204ENST00000542113 NOS1P29475 1434 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 ASXL2Q76L83 1435 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 KIDINS220Q9ULH0 1771 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 RUNDC1Q96C34 613 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 UGGT1Q9NYU2 1555 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 WDR63Q8IWG1 891 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 C14orf93Q9H972 538 aaKnown RBP8.75□□□□□ -1.01
NKRF-204ENST00000542113 MLH3Q9UHC1 1453 aa8.75□□□□□ -1.01
NKRF-204ENST00000542113 MROH2AA6NES4 1674 aa8.74□□□□□ -1.01
NKRF-204ENST00000542113 C8orf34Q49A92 452 aa8.74□□□□□ -1.01
NKRF-204ENST00000542113 NPM1P06748 294 aaKnown RBP eCLIP8.74□□□□□ -1.01
NKRF-204ENST00000542113 CCDC27Q2M243 656 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms