RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 MAP3K4Q9Y6R4 1608 aa11.83□□□□□ -0.52
TCF4-207ENST00000540999 ERBINQ96RT1 1412 aa11.83□□□□□ -0.52
TCF4-207ENST00000540999 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
TCF4-207ENST00000540999 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
TCF4-207ENST00000540999 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
TCF4-207ENST00000540999 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
TCF4-207ENST00000540999 DIP2BQ9P265 1576 aa11.82□□□□□ -0.52
TCF4-207ENST00000540999 KIF3BO15066 747 aa11.81□□□□□ -0.52
TCF4-207ENST00000540999 GRIPAP1Q4V328 841 aa11.81□□□□□ -0.52
TCF4-207ENST00000540999 TEX14Q8IWB6 1497 aa11.81□□□□□ -0.52
TCF4-207ENST00000540999 NBPF8Q3BBV2 869 aa11.81□□□□□ -0.52
TCF4-207ENST00000540999 CFAP74Q9C0B2 1584 aa11.8□□□□□ -0.52
TCF4-207ENST00000540999 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
TCF4-207ENST00000540999 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
TCF4-207ENST00000540999 PRDM16Q9HAZ2 1276 aa11.79□□□□□ -0.52
TCF4-207ENST00000540999 PLA2R1Q13018 1463 aa11.79□□□□□ -0.52
TCF4-207ENST00000540999 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
TCF4-207ENST00000540999 GLI2P10070 1586 aa11.78□□□□□ -0.52
TCF4-207ENST00000540999 KDM5CP41229 1560 aa11.78□□□□□ -0.52
TCF4-207ENST00000540999 NEO1Q92859 1461 aa11.78□□□□□ -0.52
TCF4-207ENST00000540999 DHX29Q7Z478 1369 aaKnown RBP11.78□□□□□ -0.52
TCF4-207ENST00000540999 ZNF526Q8TF50 670 aaPredicted RBP11.77□□□□□ -0.52
TCF4-207ENST00000540999 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.52
TCF4-207ENST00000540999 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.52
TCF4-207ENST00000540999 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
TCF4-207ENST00000540999 PPRC1Q5VV67 1664 aaKnown RBP11.76□□□□□ -0.53
TCF4-207ENST00000540999 HECW2Q9P2P5 1572 aa11.76□□□□□ -0.53
TCF4-207ENST00000540999 MIER1Q8N108 512 aa11.76□□□□□ -0.53
TCF4-207ENST00000540999 ABCA6Q8N139 1617 aa11.76□□□□□ -0.53
TCF4-207ENST00000540999 RICTORQ6R327 1708 aa11.76□□□□□ -0.53
TCF4-207ENST00000540999 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 YTHDC1Q96MU7 727 aaKnown RBP11.75□□□□□ -0.53
TCF4-207ENST00000540999 ARID3AQ99856 593 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 FRMPD1Q5SYB0 1578 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 RRP9O43818 475 aaKnown RBP11.75□□□□□ -0.53
TCF4-207ENST00000540999 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 A2MP01023 1474 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
TCF4-207ENST00000540999 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 E9PCH4 1651 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 PTMAP06454 111 aaKnown RBP11.74□□□□□ -0.53
TCF4-207ENST00000540999 GGT6Q6P531 493 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 PTMSP20962 102 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 FAM193AP78312 1265 aa11.74□□□□□ -0.53
TCF4-207ENST00000540999 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
TCF4-207ENST00000540999 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
TCF4-207ENST00000540999 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
TCF4-207ENST00000540999 HSPA5P11021 654 aaKnown RBP11.72□□□□□ -0.53
TCF4-207ENST00000540999 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
TCF4-207ENST00000540999 MCCP23508 829 aa11.72□□□□□ -0.53
TCF4-207ENST00000540999 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
TCF4-207ENST00000540999 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
TCF4-207ENST00000540999 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.53
TCF4-207ENST00000540999 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.54
TCF4-207ENST00000540999 NECTIN2Q92692 538 aa11.71□□□□□ -0.54
TCF4-207ENST00000540999 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
TCF4-207ENST00000540999 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
TCF4-207ENST00000540999 KANK1Q14678 1352 aa11.7□□□□□ -0.54
TCF4-207ENST00000540999 ATP10AO60312 1499 aa11.7□□□□□ -0.54
TCF4-207ENST00000540999 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
TCF4-207ENST00000540999 CEP152O94986 1710 aa11.7□□□□□ -0.54
TCF4-207ENST00000540999 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
TCF4-207ENST00000540999 TET3O43151 1660 aa11.69□□□□□ -0.54
TCF4-207ENST00000540999 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
TCF4-207ENST00000540999 UGGT1Q9NYU2 1555 aa11.68□□□□□ -0.54
TCF4-207ENST00000540999 NEFMP07197 916 aa11.67□□□□□ -0.54
TCF4-207ENST00000540999 EIF4G2P78344 907 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■■■■■ 31.9
TCF4-207ENST00000540999 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
TCF4-207ENST00000540999 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
TCF4-207ENST00000540999 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
TCF4-207ENST00000540999 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
TCF4-207ENST00000540999 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
TCF4-207ENST00000540999 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
TCF4-207ENST00000540999 RGS3P49796 1198 aa11.65□□□□□ -0.54
TCF4-207ENST00000540999 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
TCF4-207ENST00000540999 PTPRTO14522 1441 aa11.65□□□□□ -0.54
TCF4-207ENST00000540999 ZNF428Q96B54 188 aa11.65□□□□□ -0.55
TCF4-207ENST00000540999 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.55
TCF4-207ENST00000540999 TRPM2O94759 1503 aa11.64□□□□□ -0.55
TCF4-207ENST00000540999 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
TCF4-207ENST00000540999 ZNF830Q96NB3 372 aaPredicted RBP11.64□□□□□ -0.55
TCF4-207ENST00000540999 UHRF1BP1Q6BDS2 1440 aa11.64□□□□□ -0.55
TCF4-207ENST00000540999 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
TCF4-207ENST00000540999 WASHC2AQ641Q2 1341 aa11.64□□□□□ -0.55
TCF4-207ENST00000540999 SIGLEC1Q9BZZ2 1709 aa11.63□□□□□ -0.55
TCF4-207ENST00000540999 SPATA31E1Q6ZUB1 1445 aa11.63□□□□□ -0.55
TCF4-207ENST00000540999 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
TCF4-207ENST00000540999 NPATQ14207 1427 aa11.63□□□□□ -0.55
TCF4-207ENST00000540999 ZMYM4Q5VZL5 1548 aa11.63□□□□□ -0.55
TCF4-207ENST00000540999 CLGNO14967 610 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 ABCC3O15438 1527 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 BCORL1Q5H9F3 1711 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 ANAPC15P60006 121 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
TCF4-207ENST00000540999 USP47Q96K76 1375 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms