RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 HFM1A2PYH4 1435 aa12.57□□□□□ -0.4
CLDN2-202ENST00000540876 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
CLDN2-202ENST00000540876 ZNF518AQ6AHZ1 1483 aa12.56□□□□□ -0.4
CLDN2-202ENST00000540876 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
CLDN2-202ENST00000540876 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
CLDN2-202ENST00000540876 KIF3BO15066 747 aa12.55□□□□□ -0.4
CLDN2-202ENST00000540876 MLECQ14165 292 aa12.55□□□□□ -0.4
CLDN2-202ENST00000540876 KIAA1211Q6ZU35 1233 aa12.55□□□□□ -0.4
CLDN2-202ENST00000540876 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
CLDN2-202ENST00000540876 GGT6Q6P531 493 aa12.54□□□□□ -0.4
CLDN2-202ENST00000540876 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
CLDN2-202ENST00000540876 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
CLDN2-202ENST00000540876 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
CLDN2-202ENST00000540876 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
CLDN2-202ENST00000540876 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
CLDN2-202ENST00000540876 FAM13BQ9NYF5 915 aa12.53□□□□□ -0.4
CLDN2-202ENST00000540876 TRIM44Q96DX7 344 aaPredicted RBP12.52□□□□□ -0.41
CLDN2-202ENST00000540876 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
CLDN2-202ENST00000540876 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLDN2-202ENST00000540876 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 CROCC2H7BZ55 1655 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 SMAP1Q8IYB5 467 aaPredicted RBP12.51□□□□□ -0.41
CLDN2-202ENST00000540876 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
CLDN2-202ENST00000540876 ADGRL2O95490 1459 aa12.5□□□□□ -0.41
CLDN2-202ENST00000540876 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
CLDN2-202ENST00000540876 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
CLDN2-202ENST00000540876 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
CLDN2-202ENST00000540876 NUP155O75694 1391 aa12.49□□□□□ -0.41
CLDN2-202ENST00000540876 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
CLDN2-202ENST00000540876 KIDINS220Q9ULH0 1771 aa12.49□□□□□ -0.41
CLDN2-202ENST00000540876 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 KDM5CP41229 1560 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 MLH3Q9UHC1 1453 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
CLDN2-202ENST00000540876 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
CLDN2-202ENST00000540876 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
CLDN2-202ENST00000540876 MAP7D2Q96T17 732 aa12.47□□□□□ -0.41
CLDN2-202ENST00000540876 MRE11P49959 708 aa12.47□□□□□ -0.41
CLDN2-202ENST00000540876 RIPK4P57078 832 aa12.47□□□□□ -0.41
CLDN2-202ENST00000540876 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
CLDN2-202ENST00000540876 PLIN1O60240 522 aa12.46□□□□□ -0.41
CLDN2-202ENST00000540876 NCLP19338 710 aaKnown RBP12.46□□□□□ -0.41
CLDN2-202ENST00000540876 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.41
CLDN2-202ENST00000540876 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.42
CLDN2-202ENST00000540876 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.42
CLDN2-202ENST00000540876 A2MP01023 1474 aa12.46□□□□□ -0.42
CLDN2-202ENST00000540876 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 HECW2Q9P2P5 1572 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 ABCA6Q8N139 1617 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 PKD2Q13563 968 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 MAST1Q9Y2H9 1570 aa12.45□□□□□ -0.42
CLDN2-202ENST00000540876 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
CLDN2-202ENST00000540876 L3MBTL2Q969R5 705 aa12.44□□□□□ -0.42
CLDN2-202ENST00000540876 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
CLDN2-202ENST00000540876 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
CLDN2-202ENST00000540876 GRPEL1Q9HAV7 217 aa12.43□□□□□ -0.42
CLDN2-202ENST00000540876 DUOX2Q9NRD8 1548 aa12.43□□□□□ -0.42
CLDN2-202ENST00000540876 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
CLDN2-202ENST00000540876 BECN1Q14457 450 aa12.43□□□□□ -0.42
CLDN2-202ENST00000540876 DIP2CQ9Y2E4 1556 aa12.42□□□□□ -0.42
CLDN2-202ENST00000540876 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
CLDN2-202ENST00000540876 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
CLDN2-202ENST00000540876 PLXNC1O60486 1568 aa12.41□□□□□ -0.42
CLDN2-202ENST00000540876 ATP10AO60312 1499 aa12.41□□□□□ -0.42
CLDN2-202ENST00000540876 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
CLDN2-202ENST00000540876 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
CLDN2-202ENST00000540876 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
CLDN2-202ENST00000540876 DMTNQ08495 405 aa12.41□□□□□ -0.42
CLDN2-202ENST00000540876 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
CLDN2-202ENST00000540876 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
CLDN2-202ENST00000540876 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
CLDN2-202ENST00000540876 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
CLDN2-202ENST00000540876 PZPP20742 1482 aa12.39□□□□□ -0.43
CLDN2-202ENST00000540876 SIGLEC1Q9BZZ2 1709 aa12.39□□□□□ -0.43
CLDN2-202ENST00000540876 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
CLDN2-202ENST00000540876 TRAK2O60296 914 aa12.38□□□□□ -0.43
CLDN2-202ENST00000540876 OFD1O75665 1012 aa12.38□□□□□ -0.43
CLDN2-202ENST00000540876 UTP14CQ5TAP6 766 aaKnown RBP12.38□□□□□ -0.43
CLDN2-202ENST00000540876 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
CLDN2-202ENST00000540876 MCM4P33991 863 aa12.38□□□□□ -0.43
CLDN2-202ENST00000540876 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
CLDN2-202ENST00000540876 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
CLDN2-202ENST00000540876 ZNF830Q96NB3 372 aaPredicted RBP12.38□□□□□ -0.43
CLDN2-202ENST00000540876 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
CLDN2-202ENST00000540876 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
CLDN2-202ENST00000540876 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
CLDN2-202ENST00000540876 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
CLDN2-202ENST00000540876 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
CLDN2-202ENST00000540876 CENPQQ7L2Z9 268 aaPredicted RBP12.36□□□□□ -0.43
CLDN2-202ENST00000540876 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
CLDN2-202ENST00000540876 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
CLDN2-202ENST00000540876 UQCRHLA0A096LP55 91 aa12.35□□□□□ -0.43
CLDN2-202ENST00000540876 UQCRHP07919 91 aa12.35□□□□□ -0.43
CLDN2-202ENST00000540876 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms