RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 KTN1Q86UP2 1357 aaKnown RBP11.55□□□□□ -0.56
C2CD3-215ENST00000540452 SYNMO15061 1565 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 SOCS7O14512 581 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 SLC52A1Q9NWF4 448 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
C2CD3-215ENST00000540452 EIF3AQ14152 1382 aaKnown RBP11.54□□□□□ -0.56
C2CD3-215ENST00000540452 SCAF11Q99590 1463 aaKnown RBP11.54□□□□□ -0.56
C2CD3-215ENST00000540452 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
C2CD3-215ENST00000540452 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-215ENST00000540452 SPATA31D1Q6ZQQ2 1576 aa11.53□□□□□ -0.56
C2CD3-215ENST00000540452 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
C2CD3-215ENST00000540452 GGT6Q6P531 493 aa11.52□□□□□ -0.57
C2CD3-215ENST00000540452 MSH5O43196 834 aa11.51□□□□□ -0.57
C2CD3-215ENST00000540452 RGL3Q3MIN7 710 aa11.51□□□□□ -0.57
C2CD3-215ENST00000540452 ZNF326Q5BKZ1 582 aaKnown RBP11.51□□□□□ -0.57
C2CD3-215ENST00000540452 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
C2CD3-215ENST00000540452 PIK3C2GO75747 1445 aa11.51□□□□□ -0.57
C2CD3-215ENST00000540452 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
C2CD3-215ENST00000540452 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
C2CD3-215ENST00000540452 TMEM131LA2VDJ0 1609 aa11.49□□□□□ -0.57
C2CD3-215ENST00000540452 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
C2CD3-215ENST00000540452 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
C2CD3-215ENST00000540452 NEXMIFQ5QGS0 1516 aa11.49□□□□□ -0.57
C2CD3-215ENST00000540452 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
C2CD3-215ENST00000540452 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
C2CD3-215ENST00000540452 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-215ENST00000540452 CFAP65Q6ZU64 1925 aaKnown RBP11.47□□□□□ -0.57
C2CD3-215ENST00000540452 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-215ENST00000540452 TMF1P82094 1093 aa11.46□□□□□ -0.57
C2CD3-215ENST00000540452 TESK2Q96S53 571 aa11.46□□□□□ -0.57
C2CD3-215ENST00000540452 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
C2CD3-215ENST00000540452 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
C2CD3-215ENST00000540452 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-215ENST00000540452 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
C2CD3-215ENST00000540452 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
C2CD3-215ENST00000540452 MYO5BQ9ULV0 1848 aa11.42□□□□□ -0.58
C2CD3-215ENST00000540452 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
C2CD3-215ENST00000540452 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
C2CD3-215ENST00000540452 IDI1Q13907 227 aa11.4□□□□□ -0.58
C2CD3-215ENST00000540452 RALBP1Q15311 655 aa11.4□□□□□ -0.58
C2CD3-215ENST00000540452 ARHGEF28Q8N1W1 1705 aaKnown RBP11.4□□□□□ -0.58
C2CD3-215ENST00000540452 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
C2CD3-215ENST00000540452 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
C2CD3-215ENST00000540452 MYOM1P52179 1685 aa11.39□□□□□ -0.59
C2CD3-215ENST00000540452 INSRP06213 1382 aa11.39□□□□□ -0.59
C2CD3-215ENST00000540452 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
C2CD3-215ENST00000540452 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
C2CD3-215ENST00000540452 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
C2CD3-215ENST00000540452 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
C2CD3-215ENST00000540452 ESF1Q9H501 851 aaKnown RBP11.37□□□□□ -0.59
C2CD3-215ENST00000540452 ZMYM3Q14202 1370 aa11.37□□□□□ -0.59
C2CD3-215ENST00000540452 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
C2CD3-215ENST00000540452 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
C2CD3-215ENST00000540452 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
C2CD3-215ENST00000540452 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
C2CD3-215ENST00000540452 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-215ENST00000540452 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
C2CD3-215ENST00000540452 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
C2CD3-215ENST00000540452 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
C2CD3-215ENST00000540452 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
C2CD3-215ENST00000540452 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
C2CD3-215ENST00000540452 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-215ENST00000540452 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
C2CD3-215ENST00000540452 KNDC1Q76NI1 1749 aa11.34□□□□□ -0.59
C2CD3-215ENST00000540452 ALKQ9UM73 1620 aa11.34□□□□□ -0.59
C2CD3-215ENST00000540452 TNRQ92752 1358 aa11.33□□□□□ -0.6
C2CD3-215ENST00000540452 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
C2CD3-215ENST00000540452 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
C2CD3-215ENST00000540452 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
C2CD3-215ENST00000540452 C3P01024 1663 aa11.32□□□□□ -0.6
C2CD3-215ENST00000540452 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
C2CD3-215ENST00000540452 RIMS2Q9UQ26 1411 aa11.31□□□□□ -0.6
C2CD3-215ENST00000540452 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
C2CD3-215ENST00000540452 PTPRMP28827 1452 aa11.3□□□□□ -0.6
C2CD3-215ENST00000540452 SLIT1O75093 1534 aa11.3□□□□□ -0.6
C2CD3-215ENST00000540452 TECPR2O15040 1411 aa11.29□□□□□ -0.6
C2CD3-215ENST00000540452 YTHDC2Q9H6S0 1430 aaKnown RBP11.29□□□□□ -0.6
C2CD3-215ENST00000540452 NRXN3Q9Y4C0 1643 aa11.29□□□□□ -0.6
C2CD3-215ENST00000540452 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
C2CD3-215ENST00000540452 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
C2CD3-215ENST00000540452 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 ARHGAP23Q9P227 1491 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 SIRT1Q96EB6 747 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
C2CD3-215ENST00000540452 ABCC11Q96J66 1382 aa11.28□□□□□ -0.6
C2CD3-215ENST00000540452 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.6
C2CD3-215ENST00000540452 CPS1P31327 1500 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 KNSTRNQ9Y448 316 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 NSD2O96028 1365 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 TMEM2Q9UHN6 1383 aa11.27□□□□□ -0.61
C2CD3-215ENST00000540452 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
C2CD3-215ENST00000540452 POLR3GLQ9BT43 218 aa11.26□□□□□ -0.61
C2CD3-215ENST00000540452 PANK3Q9H999 370 aa11.26□□□□□ -0.61
C2CD3-215ENST00000540452 ZNF142P52746 1687 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms