RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TMF1P82094 1093 aa26.66■■□□□ 1.86
TMEM260-203ENST00000539559 INO80Q9ULG1 1556 aaPredicted RBP26.66■■□□□ 1.86
TMEM260-203ENST00000539559 GPRASP1Q5JY77 1395 aa26.65■■□□□ 1.86
TMEM260-203ENST00000539559 ANO8Q9HCE9 1232 aaPredicted RBP26.64■■□□□ 1.86
TMEM260-203ENST00000539559 PLEKHH1Q9ULM0 1364 aa26.64■■□□□ 1.85
TMEM260-203ENST00000539559 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-203ENST00000539559 ZMYM4Q5VZL5 1548 aa26.61■■□□□ 1.85
TMEM260-203ENST00000539559 PPM1GO15355 546 aaPredicted RBP26.61■■□□□ 1.85
TMEM260-203ENST00000539559 WASHC2CQ9Y4E1 1318 aa26.6■■□□□ 1.85
TMEM260-203ENST00000539559 CFAP74Q9C0B2 1584 aa26.6■■□□□ 1.85
TMEM260-203ENST00000539559 ZNF518AQ6AHZ1 1483 aa26.6■■□□□ 1.85
TMEM260-203ENST00000539559 KDM2BQ8NHM5 1336 aa26.59■■□□□ 1.85
TMEM260-203ENST00000539559 DUSP27Q5VZP5 1158 aa26.59■■□□□ 1.85
TMEM260-203ENST00000539559 ATP10AO60312 1499 aa26.59■■□□□ 1.85
TMEM260-203ENST00000539559 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
TMEM260-203ENST00000539559 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.85
TMEM260-203ENST00000539559 USP35Q9P2H5 1018 aa26.58■■□□□ 1.85
TMEM260-203ENST00000539559 CCDC146Q8IYE0 955 aa26.58■■□□□ 1.85
TMEM260-203ENST00000539559 RGS3P49796 1198 aa26.57■■□□□ 1.84
TMEM260-203ENST00000539559 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
TMEM260-203ENST00000539559 DDRGK1Q96HY6 314 aa26.56■■□□□ 1.84
TMEM260-203ENST00000539559 KNSTRNQ9Y448 316 aa26.56■■□□□ 1.84
TMEM260-203ENST00000539559 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
TMEM260-203ENST00000539559 KANK1Q14678 1352 aa26.54■■□□□ 1.84
TMEM260-203ENST00000539559 KIF3BO15066 747 aa26.53■■□□□ 1.84
TMEM260-203ENST00000539559 NFKBIBQ15653 356 aa26.53■■□□□ 1.84
TMEM260-203ENST00000539559 POGZQ7Z3K3 1410 aa26.51■■□□□ 1.83
TMEM260-203ENST00000539559 EIF2AK4Q9P2K8 1649 aaKnown RBP26.51■■□□□ 1.83
TMEM260-203ENST00000539559 C8orf34Q49A92 452 aa26.51■■□□□ 1.83
TMEM260-203ENST00000539559 CENPQQ7L2Z9 268 aaPredicted RBP26.51■■□□□ 1.83
TMEM260-203ENST00000539559 SPINK5Q9NQ38 1064 aaPredicted RBP26.51■■□□□ 1.83
TMEM260-203ENST00000539559 KIDINS220Q9ULH0 1771 aa26.5■■□□□ 1.83
TMEM260-203ENST00000539559 GOLGA2Q08379 1002 aa26.5■■□□□ 1.83
TMEM260-203ENST00000539559 BRPF3Q9ULD4 1205 aa26.5■■□□□ 1.83
TMEM260-203ENST00000539559 AMER1Q5JTC6 1135 aaPredicted RBP26.49■■□□□ 1.83
TMEM260-203ENST00000539559 DAXXQ9UER7 740 aaPredicted RBP26.49■■□□□ 1.83
TMEM260-203ENST00000539559 NEO1Q92859 1461 aa26.48■■□□□ 1.83
TMEM260-203ENST00000539559 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
TMEM260-203ENST00000539559 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
TMEM260-203ENST00000539559 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
TMEM260-203ENST00000539559 INSRP06213 1382 aa26.47■■□□□ 1.83
TMEM260-203ENST00000539559 FAM161AQ3B820 660 aa26.46■■□□□ 1.83
TMEM260-203ENST00000539559 ZNF521Q96K83 1311 aa26.45■■□□□ 1.83
TMEM260-203ENST00000539559 VWDEQ8N2E2 1590 aa26.45■■□□□ 1.83
TMEM260-203ENST00000539559 BCAR3O75815 825 aa26.45■■□□□ 1.83
TMEM260-203ENST00000539559 MLH3Q9UHC1 1453 aa26.45■■□□□ 1.82
TMEM260-203ENST00000539559 LAMC1P11047 1609 aa26.44■■□□□ 1.82
TMEM260-203ENST00000539559 TET3O43151 1660 aa26.44■■□□□ 1.82
TMEM260-203ENST00000539559 GSE1Q14687 1217 aa26.43■■□□□ 1.82
TMEM260-203ENST00000539559 APAF1O14727 1248 aa26.43■■□□□ 1.82
TMEM260-203ENST00000539559 SLFN5Q08AF3 891 aa26.42■■□□□ 1.82
TMEM260-203ENST00000539559 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
TMEM260-203ENST00000539559 PTPRTO14522 1441 aa26.41■■□□□ 1.82
TMEM260-203ENST00000539559 TRPM2O94759 1503 aa26.41■■□□□ 1.82
TMEM260-203ENST00000539559 DMRT2Q9Y5R5 561 aa26.41■■□□□ 1.82
TMEM260-203ENST00000539559 HECW2Q9P2P5 1572 aa26.4■■□□□ 1.82
TMEM260-203ENST00000539559 MROH1Q8NDA8 1641 aa26.4■■□□□ 1.82
TMEM260-203ENST00000539559 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.39■■□□□ 1.82
TMEM260-203ENST00000539559 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.38■■□□□ 1.81
TMEM260-203ENST00000539559 FRAT2O75474 233 aaPredicted RBP26.37■■□□□ 1.81
TMEM260-203ENST00000539559 MAP3K4Q9Y6R4 1608 aa26.37■■□□□ 1.81
TMEM260-203ENST00000539559 SPHKAPQ2M3C7 1700 aa26.37■■□□□ 1.81
TMEM260-203ENST00000539559 GLI2P10070 1586 aa26.35■■□□□ 1.81
TMEM260-203ENST00000539559 RAPGEF3O95398 923 aa26.35■■□□□ 1.81
TMEM260-203ENST00000539559 IGHDP01880 384 aa26.35■■□□□ 1.81
TMEM260-203ENST00000539559 RNF17Q9BXT8 1623 aaKnown RBP26.34■■□□□ 1.81
TMEM260-203ENST00000539559 FRMPD1Q5SYB0 1578 aa26.3■■□□□ 1.8
TMEM260-203ENST00000539559 TRMT2AQ8IZ69 625 aaKnown RBP26.3■■□□□ 1.8
TMEM260-203ENST00000539559 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
TMEM260-203ENST00000539559 LMTK2Q8IWU2 1503 aa26.29■■□□□ 1.8
TMEM260-203ENST00000539559 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
TMEM260-203ENST00000539559 CLTCL1P53675 1640 aa26.29■■□□□ 1.8
TMEM260-203ENST00000539559 STAC3Q96MF2 364 aa26.29■■□□□ 1.8
TMEM260-203ENST00000539559 CEP152O94986 1710 aa26.28■■□□□ 1.8
TMEM260-203ENST00000539559 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
TMEM260-203ENST00000539559 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
TMEM260-203ENST00000539559 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
TMEM260-203ENST00000539559 SEC24BO95487 1268 aa26.27■■□□□ 1.8
TMEM260-203ENST00000539559 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
TMEM260-203ENST00000539559 GGT6Q6P531 493 aa26.26■■□□□ 1.79
TMEM260-203ENST00000539559 COG6Q9Y2V7 657 aa26.26■■□□□ 1.79
TMEM260-203ENST00000539559 NKTRP30414 1462 aaKnown RBP26.26■■□□□ 1.79
TMEM260-203ENST00000539559 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
TMEM260-203ENST00000539559 NEUROD2Q15784 382 aa26.25■■□□□ 1.79
TMEM260-203ENST00000539559 CDCA8Q53HL2 280 aa26.25■■□□□ 1.79
TMEM260-203ENST00000539559 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
TMEM260-203ENST00000539559 SCAF11Q99590 1463 aaKnown RBP26.24■■□□□ 1.79
TMEM260-203ENST00000539559 PPRC1Q5VV67 1664 aaKnown RBP26.23■■□□□ 1.79
TMEM260-203ENST00000539559 RICTORQ6R327 1708 aa26.23■■□□□ 1.79
TMEM260-203ENST00000539559 SYNMO15061 1565 aa26.23■■□□□ 1.79
TMEM260-203ENST00000539559 CARD14Q9BXL6 1004 aa26.22■■□□□ 1.79
TMEM260-203ENST00000539559 DIP2BQ9P265 1576 aa26.22■■□□□ 1.79
TMEM260-203ENST00000539559 CANXP27824 592 aaKnown RBP26.22■■□□□ 1.79
TMEM260-203ENST00000539559 TNNT2P45379 298 aaPredicted RBP26.22■■□□□ 1.79
TMEM260-203ENST00000539559 CFAP70Q5T0N1 1121 aa26.22■■□□□ 1.79
TMEM260-203ENST00000539559 RRP7AQ9Y3A4 280 aaKnown RBP26.21■■□□□ 1.79
TMEM260-203ENST00000539559 USP19O94966 1318 aa26.21■■□□□ 1.79
TMEM260-203ENST00000539559 E9PSI1 815 aa26.21■■□□□ 1.79
TMEM260-203ENST00000539559 EIF3AQ14152 1382 aaKnown RBP26.2■■□□□ 1.79
TMEM260-203ENST00000539559 NEURL4Q96JN8 1562 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms