RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
PTPRO-207ENST00000538907 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
PTPRO-207ENST00000538907 RCCD1A6NED2 376 aa11.92□□□□□ -0.5
PTPRO-207ENST00000538907 TLL1O43897 1013 aa11.92□□□□□ -0.5
PTPRO-207ENST00000538907 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
PTPRO-207ENST00000538907 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
PTPRO-207ENST00000538907 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
PTPRO-207ENST00000538907 GGCXP38435 758 aa11.91□□□□□ -0.5
PTPRO-207ENST00000538907 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
PTPRO-207ENST00000538907 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
PTPRO-207ENST00000538907 SLC10A3P09131 477 aa11.89□□□□□ -0.51
PTPRO-207ENST00000538907 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
PTPRO-207ENST00000538907 SEMA3EO15041 775 aa11.88□□□□□ -0.51
PTPRO-207ENST00000538907 PRR14Q9BWN1 585 aa11.88□□□□□ -0.51
PTPRO-207ENST00000538907 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
PTPRO-207ENST00000538907 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
PTPRO-207ENST00000538907 CFHP08603 1231 aa11.85□□□□□ -0.51
PTPRO-207ENST00000538907 SLC19A1P41440 591 aa11.85□□□□□ -0.51
PTPRO-207ENST00000538907 FCHSD2O94868 740 aa11.83□□□□□ -0.52
PTPRO-207ENST00000538907 S1PR4O95977 384 aa11.83□□□□□ -0.52
PTPRO-207ENST00000538907 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
PTPRO-207ENST00000538907 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
PTPRO-207ENST00000538907 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
PTPRO-207ENST00000538907 PXYLP1Q8TE99 480 aa11.81□□□□□ -0.52
PTPRO-207ENST00000538907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
PTPRO-207ENST00000538907 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
PTPRO-207ENST00000538907 ZNF787Q6DD87 383 aa11.78□□□□□ -0.52
PTPRO-207ENST00000538907 ADH1BP00325 375 aa11.77□□□□□ -0.53
PTPRO-207ENST00000538907 FECHP22830 423 aa11.77□□□□□ -0.53
PTPRO-207ENST00000538907 PLA2G2CQ5R387 149 aa11.77□□□□□ -0.53
PTPRO-207ENST00000538907 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
PTPRO-207ENST00000538907 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
PTPRO-207ENST00000538907 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
PTPRO-207ENST00000538907 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
PTPRO-207ENST00000538907 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
PTPRO-207ENST00000538907 SCUBE3Q8IX30 993 aa11.74□□□□□ -0.53
PTPRO-207ENST00000538907 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
PTPRO-207ENST00000538907 NR1I2O75469 434 aa11.73□□□□□ -0.53
PTPRO-207ENST00000538907 OATP04181 439 aa11.73□□□□□ -0.53
PTPRO-207ENST00000538907 GPR37O15354 613 aa11.72□□□□□ -0.53
PTPRO-207ENST00000538907 MYT1Q01538 1121 aa11.72□□□□□ -0.53
PTPRO-207ENST00000538907 HIC1Q14526 733 aa11.72□□□□□ -0.53
PTPRO-207ENST00000538907 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
PTPRO-207ENST00000538907 GDF9O60383 454 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 PRR20EP86478 221 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 PRR20CP86479 221 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 PRR20DP86480 221 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 PRR20BP86481 221 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 PRR20AP86496 221 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
PTPRO-207ENST00000538907 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
PTPRO-207ENST00000538907 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
PTPRO-207ENST00000538907 ZNF775Q96BV0 537 aaPredicted RBP11.69□□□□□ -0.54
PTPRO-207ENST00000538907 POTECB2RU33 542 aa11.68□□□□□ -0.54
PTPRO-207ENST00000538907 DGAT1O75907 488 aa11.68□□□□□ -0.54
PTPRO-207ENST00000538907 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
PTPRO-207ENST00000538907 GNPATO15228 680 aa11.66□□□□□ -0.54
PTPRO-207ENST00000538907 SPSB2Q99619 263 aa11.66□□□□□ -0.54
PTPRO-207ENST00000538907 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
PTPRO-207ENST00000538907 MORN1Q5T089 497 aa11.64□□□□□ -0.55
PTPRO-207ENST00000538907 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
PTPRO-207ENST00000538907 FAM187AA6NFU0 413 aa11.63□□□□□ -0.55
PTPRO-207ENST00000538907 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
PTPRO-207ENST00000538907 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
PTPRO-207ENST00000538907 FUT2Q10981 343 aa11.62□□□□□ -0.55
PTPRO-207ENST00000538907 RDH13Q8NBN7 331 aa11.62□□□□□ -0.55
PTPRO-207ENST00000538907 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
PTPRO-207ENST00000538907 RSPH4AQ5TD94 716 aa11.61□□□□□ -0.55
PTPRO-207ENST00000538907 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
PTPRO-207ENST00000538907 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
PTPRO-207ENST00000538907 SLC27A5Q9Y2P5 690 aa11.59□□□□□ -0.55
PTPRO-207ENST00000538907 FOXC1Q12948 553 aa11.58□□□□□ -0.56
PTPRO-207ENST00000538907 GCGRP47871 477 aa11.57□□□□□ -0.56
PTPRO-207ENST00000538907 SMYD5Q6GMV2 418 aa11.57□□□□□ -0.56
PTPRO-207ENST00000538907 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
PTPRO-207ENST00000538907 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
PTPRO-207ENST00000538907 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
PTPRO-207ENST00000538907 AAASQ9NRG9 546 aa11.56□□□□□ -0.56
PTPRO-207ENST00000538907 FCF1Q9Y324 198 aaKnown RBP11.56□□□□□ -0.56
PTPRO-207ENST00000538907 RPIAP49247 311 aa11.54□□□□□ -0.56
PTPRO-207ENST00000538907 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
PTPRO-207ENST00000538907 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
PTPRO-207ENST00000538907 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
PTPRO-207ENST00000538907 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
PTPRO-207ENST00000538907 TOR4AQ9NXH8 423 aa11.51□□□□□ -0.57
PTPRO-207ENST00000538907 SALL2Q9Y467 1007 aaPredicted RBP11.5□□□□□ -0.57
PTPRO-207ENST00000538907 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
PTPRO-207ENST00000538907 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
PTPRO-207ENST00000538907 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
PTPRO-207ENST00000538907 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
PTPRO-207ENST00000538907 AVPP01185 164 aa11.45□□□□□ -0.58
PTPRO-207ENST00000538907 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
PTPRO-207ENST00000538907 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
PTPRO-207ENST00000538907 LCE2AQ5TA79 106 aaPredicted RBP11.44□□□□□ -0.58
PTPRO-207ENST00000538907 CRIPAKQ8N1N5 446 aa11.44□□□□□ -0.58
PTPRO-207ENST00000538907 CD46P15529 392 aa11.43□□□□□ -0.58
PTPRO-207ENST00000538907 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
PTPRO-207ENST00000538907 HLA-CQ95604 372 aa11.41□□□□□ -0.58
PTPRO-207ENST00000538907 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
PTPRO-207ENST00000538907 MMP16P51512 607 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms