RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 INO80Q9ULG1 1556 aaPredicted RBP14.83□□□□□ -0.04
NPIPB3-209ENST00000538439 TPRNQ4KMQ1 711 aa14.83□□□□□ -0.04
NPIPB3-209ENST00000538439 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
NPIPB3-209ENST00000538439 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
NPIPB3-209ENST00000538439 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
NPIPB3-209ENST00000538439 RICTORQ6R327 1708 aa14.81□□□□□ -0.04
NPIPB3-209ENST00000538439 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
NPIPB3-209ENST00000538439 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
NPIPB3-209ENST00000538439 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
NPIPB3-209ENST00000538439 ERBINQ96RT1 1412 aa14.8□□□□□ -0.04
NPIPB3-209ENST00000538439 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
NPIPB3-209ENST00000538439 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
NPIPB3-209ENST00000538439 KIDINS220Q9ULH0 1771 aa14.79□□□□□ -0.04
NPIPB3-209ENST00000538439 ZMYM4Q5VZL5 1548 aa14.78□□□□□ -0.04
NPIPB3-209ENST00000538439 A2MP01023 1474 aa14.77□□□□□ -0.04
NPIPB3-209ENST00000538439 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.04
NPIPB3-209ENST00000538439 SOCS7O14512 581 aa14.76□□□□□ -0.05
NPIPB3-209ENST00000538439 HSPA2P54652 639 aa14.75□□□□□ -0.05
NPIPB3-209ENST00000538439 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
NPIPB3-209ENST00000538439 KIF3BO15066 747 aa14.74□□□□□ -0.05
NPIPB3-209ENST00000538439 YEATS2Q9ULM3 1422 aa14.74□□□□□ -0.05
NPIPB3-209ENST00000538439 NUP155O75694 1391 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 SIGLEC1Q9BZZ2 1709 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 PDAP1Q13442 181 aaKnown RBP14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 MPHOSPH9Q99550 1183 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 ABCA6Q8N139 1617 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
NPIPB3-209ENST00000538439 ATP10AO60312 1499 aa14.72□□□□□ -0.05
NPIPB3-209ENST00000538439 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
NPIPB3-209ENST00000538439 KANK1Q14678 1352 aa14.71□□□□□ -0.06
NPIPB3-209ENST00000538439 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
NPIPB3-209ENST00000538439 ZEB1P37275 1124 aaPredicted RBP14.7□□□□□ -0.06
NPIPB3-209ENST00000538439 UNC13BO14795 1591 aa14.68□□□□□ -0.06
NPIPB3-209ENST00000538439 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
NPIPB3-209ENST00000538439 RIMS1Q86UR5 1692 aaKnown RBP14.68□□□□□ -0.06
NPIPB3-209ENST00000538439 GGT6Q6P531 493 aa14.67□□□□□ -0.06
NPIPB3-209ENST00000538439 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
NPIPB3-209ENST00000538439 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
NPIPB3-209ENST00000538439 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
NPIPB3-209ENST00000538439 PZPP20742 1482 aa14.66□□□□□ -0.06
NPIPB3-209ENST00000538439 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
NPIPB3-209ENST00000538439 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
NPIPB3-209ENST00000538439 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 PCDHB8Q9UN66 801 aa14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 PCDHB13Q9Y5F0 798 aa14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 AGLP35573 1532 aa14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
NPIPB3-209ENST00000538439 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
NPIPB3-209ENST00000538439 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
NPIPB3-209ENST00000538439 RNF17Q9BXT8 1623 aaKnown RBP14.62□□□□□ -0.07
NPIPB3-209ENST00000538439 ARID4BQ4LE39 1312 aaPredicted RBP14.62□□□□□ -0.07
NPIPB3-209ENST00000538439 PRDM15P57071 1507 aaPredicted RBP14.61□□□□□ -0.07
NPIPB3-209ENST00000538439 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
NPIPB3-209ENST00000538439 PSEN1P49768 467 aa14.6□□□□□ -0.07
NPIPB3-209ENST00000538439 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
NPIPB3-209ENST00000538439 STRCQ7RTU9 1775 aa14.59□□□□□ -0.07
NPIPB3-209ENST00000538439 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
NPIPB3-209ENST00000538439 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
NPIPB3-209ENST00000538439 ANKRD30BQ9BXX2 1392 aa14.58□□□□□ -0.08
NPIPB3-209ENST00000538439 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
NPIPB3-209ENST00000538439 MLECQ14165 292 aa14.57□□□□□ -0.08
NPIPB3-209ENST00000538439 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
NPIPB3-209ENST00000538439 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
NPIPB3-209ENST00000538439 TET3O43151 1660 aa14.55□□□□□ -0.08
NPIPB3-209ENST00000538439 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
NPIPB3-209ENST00000538439 ABCC3O15438 1527 aa14.54□□□□□ -0.08
NPIPB3-209ENST00000538439 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
NPIPB3-209ENST00000538439 ZC3H13Q5T200 1668 aaKnown RBP14.52□□□□□ -0.08
NPIPB3-209ENST00000538439 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
NPIPB3-209ENST00000538439 CEP152O94986 1710 aa14.52□□□□□ -0.09
NPIPB3-209ENST00000538439 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
NPIPB3-209ENST00000538439 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
NPIPB3-209ENST00000538439 WDR70Q9NW82 654 aa14.51□□□□□ -0.09
NPIPB3-209ENST00000538439 ARHGAP31Q2M1Z3 1444 aa14.5□□□□□ -0.09
NPIPB3-209ENST00000538439 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
NPIPB3-209ENST00000538439 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
NPIPB3-209ENST00000538439 MFRPQ9BY79 579 aa14.5□□□□□ -0.09
NPIPB3-209ENST00000538439 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
NPIPB3-209ENST00000538439 E9PCH4 1651 aa14.49□□□□□ -0.09
NPIPB3-209ENST00000538439 IFNL1Q8IU54 200 aa14.49□□□□□ -0.09
NPIPB3-209ENST00000538439 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
NPIPB3-209ENST00000538439 PREX1Q8TCU6 1659 aa14.49□□□□□ -0.09
NPIPB3-209ENST00000538439 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
NPIPB3-209ENST00000538439 FER1L4A9Z1Z3 1794 aa14.48□□□□□ -0.09
NPIPB3-209ENST00000538439 CEBPAP49715 358 aaPredicted RBP14.48□□□□□ -0.09
NPIPB3-209ENST00000538439 PTPRTO14522 1441 aa14.48□□□□□ -0.09
NPIPB3-209ENST00000538439 NPATQ14207 1427 aa14.48□□□□□ -0.09
NPIPB3-209ENST00000538439 MAP3K13O43283 966 aa14.47□□□□□ -0.09
NPIPB3-209ENST00000538439 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
NPIPB3-209ENST00000538439 KIF12Q96FN5 646 aa14.47□□□□□ -0.09
NPIPB3-209ENST00000538439 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
NPIPB3-209ENST00000538439 CADPS2Q86UW7 1296 aa14.45□□□□□ -0.1
NPIPB3-209ENST00000538439 CLTCQ00610 1675 aaKnown RBP14.45□□□□□ -0.1
NPIPB3-209ENST00000538439 TRPM2O94759 1503 aa14.45□□□□□ -0.1
NPIPB3-209ENST00000538439 ZMYM3Q14202 1370 aa14.45□□□□□ -0.1
NPIPB3-209ENST00000538439 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
NPIPB3-209ENST00000538439 NLRP6P59044 892 aa14.43□□□□□ -0.1
NPIPB3-209ENST00000538439 NOS1P29475 1434 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms