RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
DDB1-210ENST00000538129 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.91
DDB1-210ENST00000538129 HECW1Q76N89 1606 aa9.39□□□□□ -0.91
DDB1-210ENST00000538129 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
DDB1-210ENST00000538129 FYCO1Q9BQS8 1478 aa9.38□□□□□ -0.91
DDB1-210ENST00000538129 TULP1O00294 542 aaPredicted RBP9.37□□□□□ -0.91
DDB1-210ENST00000538129 CCDC18Q5T9S5 1454 aa9.36□□□□□ -0.91
DDB1-210ENST00000538129 PDIA6Q15084 440 aa9.36□□□□□ -0.91
DDB1-210ENST00000538129 ANO8Q9HCE9 1232 aaPredicted RBP9.36□□□□□ -0.91
DDB1-210ENST00000538129 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
DDB1-210ENST00000538129 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
DDB1-210ENST00000538129 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
DDB1-210ENST00000538129 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 LRRIQ1Q96JM4 1722 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 PCF11O94913 1555 aaKnown RBP9.34□□□□□ -0.91
DDB1-210ENST00000538129 CD109Q6YHK3 1445 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 NBR1Q14596 966 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
DDB1-210ENST00000538129 CFAP43Q8NDM7 1665 aa9.33□□□□□ -0.92
DDB1-210ENST00000538129 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
DDB1-210ENST00000538129 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
DDB1-210ENST00000538129 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
DDB1-210ENST00000538129 TROQ12816 1431 aaPredicted RBP9.32□□□□□ -0.92
DDB1-210ENST00000538129 PTGER2P43116 358 aa9.32□□□□□ -0.92
DDB1-210ENST00000538129 EPAS1Q99814 870 aa9.32□□□□□ -0.92
DDB1-210ENST00000538129 MAGI3Q5TCQ9 1506 aa9.31□□□□□ -0.92
DDB1-210ENST00000538129 ABCA9Q8IUA7 1624 aa9.31□□□□□ -0.92
DDB1-210ENST00000538129 FBXW7Q969H0 707 aa9.31□□□□□ -0.92
DDB1-210ENST00000538129 TEX14Q8IWB6 1497 aa9.31□□□□□ -0.92
DDB1-210ENST00000538129 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
DDB1-210ENST00000538129 POTEMA6NI47 508 aa9.3□□□□□ -0.92
DDB1-210ENST00000538129 PHF14O94880 888 aa9.3□□□□□ -0.92
DDB1-210ENST00000538129 VARS2Q5ST30 1063 aaKnown RBP9.3□□□□□ -0.92
DDB1-210ENST00000538129 POTEGQ6S5H5 508 aa9.3□□□□□ -0.92
DDB1-210ENST00000538129 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
DDB1-210ENST00000538129 PPRC1Q5VV67 1664 aaKnown RBP9.29□□□□□ -0.92
DDB1-210ENST00000538129 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
DDB1-210ENST00000538129 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
DDB1-210ENST00000538129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.926e-6■■□□□ 13.3
DDB1-210ENST00000538129 MTUS2Q5JR59 1369 aa9.28□□□□□ -0.92
DDB1-210ENST00000538129 MAP3K1Q13233 1512 aa9.28□□□□□ -0.92
DDB1-210ENST00000538129 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
DDB1-210ENST00000538129 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
DDB1-210ENST00000538129 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.93
DDB1-210ENST00000538129 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
DDB1-210ENST00000538129 ZDHHC16Q969W1 377 aa9.27□□□□□ -0.93
DDB1-210ENST00000538129 PLCH2O75038 1416 aa9.27□□□□□ -0.93
DDB1-210ENST00000538129 KIF14Q15058 1648 aa9.27□□□□□ -0.93
DDB1-210ENST00000538129 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 PBX2P40425 430 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 FOSBP53539 338 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 DDX12PQ92771 950 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 NEO1Q92859 1461 aa9.26□□□□□ -0.93
DDB1-210ENST00000538129 TIAM1Q13009 1591 aa9.25□□□□□ -0.93
DDB1-210ENST00000538129 ARAP3Q8WWN8 1544 aa9.25□□□□□ -0.93
DDB1-210ENST00000538129 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
DDB1-210ENST00000538129 KDM6BO15054 1643 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 AKNAQ7Z591 1439 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 FANCAO15360 1455 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
DDB1-210ENST00000538129 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 EHBP1L1Q8N3D4 1523 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 PTPREP23469 700 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
DDB1-210ENST00000538129 KANK4Q5T7N3 995 aaPredicted RBP9.23□□□□□ -0.93
DDB1-210ENST00000538129 GPATCH8Q9UKJ3 1502 aaKnown RBP9.22□□□□□ -0.93
DDB1-210ENST00000538129 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
DDB1-210ENST00000538129 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
DDB1-210ENST00000538129 CFAP74Q9C0B2 1584 aa9.21□□□□□ -0.93
DDB1-210ENST00000538129 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
DDB1-210ENST00000538129 SEMA3EO15041 775 aa9.21□□□□□ -0.94
DDB1-210ENST00000538129 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.94
DDB1-210ENST00000538129 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
DDB1-210ENST00000538129 CDC42BPBQ9Y5S2 1711 aa9.21□□□□□ -0.94
DDB1-210ENST00000538129 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
DDB1-210ENST00000538129 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
DDB1-210ENST00000538129 MAP3K7O43318 606 aa9.2□□□□□ -0.94
DDB1-210ENST00000538129 RAPGEF3O95398 923 aa9.2□□□□□ -0.94
DDB1-210ENST00000538129 NCOA2Q15596 1464 aa9.2□□□□□ -0.94
DDB1-210ENST00000538129 ARHGAP5Q13017 1502 aa9.2□□□□□ -0.94
DDB1-210ENST00000538129 TESPA1A2RU30 521 aaPredicted RBP9.19□□□□□ -0.94
DDB1-210ENST00000538129 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
DDB1-210ENST00000538129 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
DDB1-210ENST00000538129 SCAPERQ9BY12 1400 aa9.19□□□□□ -0.94
DDB1-210ENST00000538129 DENND4BO75064 1496 aaPredicted RBP9.19□□□□□ -0.94
DDB1-210ENST00000538129 PREX2Q70Z35 1606 aa9.19□□□□□ -0.94
DDB1-210ENST00000538129 ADGRL1O94910 1474 aa9.18□□□□□ -0.94
DDB1-210ENST00000538129 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
DDB1-210ENST00000538129 ZNF777Q9ULD5 760 aaPredicted RBP9.18□□□□□ -0.94
DDB1-210ENST00000538129 PLEKHH2Q8IVE3 1493 aa9.16□□□□□ -0.94
DDB1-210ENST00000538129 KIAA1107Q9UPP5 1409 aa9.16□□□□□ -0.94
DDB1-210ENST00000538129 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
DDB1-210ENST00000538129 AFAP1Q8N556 730 aa9.16□□□□□ -0.94
DDB1-210ENST00000538129 RBM33Q96EV2 1170 aaKnown RBP9.16□□□□□ -0.94
DDB1-210ENST00000538129 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
DDB1-210ENST00000538129 OSBPP22059 807 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms