RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 AFAP1Q8N556 730 aa20.33■□□□□ 0.84
CHFR-213ENST00000536843 TRPM1Q7Z4N2 1603 aa20.33■□□□□ 0.84
CHFR-213ENST00000536843 CRBNQ96SW2 442 aa20.32■□□□□ 0.84
CHFR-213ENST00000536843 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
CHFR-213ENST00000536843 C8orf34Q49A92 452 aa20.31■□□□□ 0.84
CHFR-213ENST00000536843 RRAGDQ9NQL2 400 aaPredicted RBP20.31■□□□□ 0.84
CHFR-213ENST00000536843 ATP10AO60312 1499 aa20.29■□□□□ 0.84
CHFR-213ENST00000536843 GPRASP1Q5JY77 1395 aa20.29■□□□□ 0.84
CHFR-213ENST00000536843 CENPQQ7L2Z9 268 aaPredicted RBP20.28■□□□□ 0.84
CHFR-213ENST00000536843 INSRP06213 1382 aa20.28■□□□□ 0.84
CHFR-213ENST00000536843 PLIN1O60240 522 aa20.27■□□□□ 0.84
CHFR-213ENST00000536843 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
CHFR-213ENST00000536843 E9PCH4 1651 aa20.26■□□□□ 0.83
CHFR-213ENST00000536843 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
CHFR-213ENST00000536843 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
CHFR-213ENST00000536843 FANCAO15360 1455 aa20.24■□□□□ 0.83
CHFR-213ENST00000536843 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
CHFR-213ENST00000536843 ZMYND15Q9H091 742 aa20.24■□□□□ 0.83
CHFR-213ENST00000536843 NLRP13Q86W25 1043 aa20.24■□□□□ 0.83
CHFR-213ENST00000536843 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
CHFR-213ENST00000536843 TESK2Q96S53 571 aa20.22■□□□□ 0.83
CHFR-213ENST00000536843 POGKQ9P215 609 aa20.22■□□□□ 0.83
CHFR-213ENST00000536843 CD109Q6YHK3 1445 aa20.21■□□□□ 0.83
CHFR-213ENST00000536843 VSIG10Q8N0Z9 540 aa20.21■□□□□ 0.83
CHFR-213ENST00000536843 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
CHFR-213ENST00000536843 PRDM15P57071 1507 aaPredicted RBP20.21■□□□□ 0.83
CHFR-213ENST00000536843 RRP9O43818 475 aaKnown RBP20.21■□□□□ 0.83
CHFR-213ENST00000536843 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
CHFR-213ENST00000536843 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
CHFR-213ENST00000536843 LAMC1P11047 1609 aa20.19■□□□□ 0.82
CHFR-213ENST00000536843 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
CHFR-213ENST00000536843 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
CHFR-213ENST00000536843 PER1O15534 1290 aaPredicted RBP20.16■□□□□ 0.82
CHFR-213ENST00000536843 CFAP74Q9C0B2 1584 aa20.16■□□□□ 0.82
CHFR-213ENST00000536843 CLCN1P35523 988 aa20.16■□□□□ 0.82
CHFR-213ENST00000536843 HSP90AA2PQ14568 343 aaPredicted RBP20.16■□□□□ 0.82
CHFR-213ENST00000536843 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
CHFR-213ENST00000536843 GLI2P10070 1586 aa20.16■□□□□ 0.82
CHFR-213ENST00000536843 ADGRL1O94910 1474 aa20.16■□□□□ 0.82
CHFR-213ENST00000536843 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.82
CHFR-213ENST00000536843 PTPRTO14522 1441 aa20.14■□□□□ 0.81
CHFR-213ENST00000536843 ATP7AQ04656 1500 aa20.14■□□□□ 0.81
CHFR-213ENST00000536843 KIF3BO15066 747 aa20.14■□□□□ 0.81
CHFR-213ENST00000536843 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.81
CHFR-213ENST00000536843 TMF1P82094 1093 aa20.13■□□□□ 0.81
CHFR-213ENST00000536843 TRPM2O94759 1503 aa20.13■□□□□ 0.81
CHFR-213ENST00000536843 HSP90AA1P07900 732 aaKnown RBP20.13■□□□□ 0.81
CHFR-213ENST00000536843 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
CHFR-213ENST00000536843 NAP1L5Q96NT1 182 aaPredicted RBP20.12■□□□□ 0.81
CHFR-213ENST00000536843 PANK3Q9H999 370 aa20.12■□□□□ 0.81
CHFR-213ENST00000536843 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CHFR-213ENST00000536843 DEPDC5O75140 1603 aa20.11■□□□□ 0.81
CHFR-213ENST00000536843 KANK1Q14678 1352 aa20.11■□□□□ 0.81
CHFR-213ENST00000536843 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
CHFR-213ENST00000536843 USP19O94966 1318 aa20.1■□□□□ 0.81
CHFR-213ENST00000536843 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
CHFR-213ENST00000536843 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
CHFR-213ENST00000536843 NEO1Q92859 1461 aa20.09■□□□□ 0.81
CHFR-213ENST00000536843 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
CHFR-213ENST00000536843 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
CHFR-213ENST00000536843 SPHKAPQ2M3C7 1700 aa20.08■□□□□ 0.8
CHFR-213ENST00000536843 DIP2BQ9P265 1576 aa20.08■□□□□ 0.8
CHFR-213ENST00000536843 TET3O43151 1660 aa20.07■□□□□ 0.8
CHFR-213ENST00000536843 FSD2A1L4K1 749 aa20.07■□□□□ 0.8
CHFR-213ENST00000536843 BECN1Q14457 450 aa20.07■□□□□ 0.8
CHFR-213ENST00000536843 VWDEQ8N2E2 1590 aa20.07■□□□□ 0.8
CHFR-213ENST00000536843 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
CHFR-213ENST00000536843 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
CHFR-213ENST00000536843 CEP152O94986 1710 aa20.05■□□□□ 0.8
CHFR-213ENST00000536843 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
CHFR-213ENST00000536843 RGS3P49796 1198 aa20.05■□□□□ 0.8
CHFR-213ENST00000536843 ANTXR1Q9H6X2 564 aa20.05■□□□□ 0.8
CHFR-213ENST00000536843 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
CHFR-213ENST00000536843 GOLGA6L3A6NEY3 463 aa20.04■□□□□ 0.8
CHFR-213ENST00000536843 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
CHFR-213ENST00000536843 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.8
CHFR-213ENST00000536843 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.79
CHFR-213ENST00000536843 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
CHFR-213ENST00000536843 IQGAP1P46940 1657 aa20■□□□□ 0.79
CHFR-213ENST00000536843 SCAF11Q99590 1463 aaKnown RBP20■□□□□ 0.79
CHFR-213ENST00000536843 NLRP1Q9C000 1473 aa20■□□□□ 0.79
CHFR-213ENST00000536843 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
CHFR-213ENST00000536843 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
CHFR-213ENST00000536843 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
CHFR-213ENST00000536843 KIDINS220Q9ULH0 1771 aa19.97■□□□□ 0.79
CHFR-213ENST00000536843 MLH3Q9UHC1 1453 aa19.97■□□□□ 0.79
CHFR-213ENST00000536843 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
CHFR-213ENST00000536843 PANK2Q9BZ23 570 aa19.95■□□□□ 0.78
CHFR-213ENST00000536843 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
CHFR-213ENST00000536843 KNSTRNQ9Y448 316 aa19.95■□□□□ 0.78
CHFR-213ENST00000536843 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
CHFR-213ENST00000536843 CDCA8Q53HL2 280 aa19.94■□□□□ 0.78
CHFR-213ENST00000536843 EFCAB6Q5THR3 1501 aa19.94■□□□□ 0.78
CHFR-213ENST00000536843 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
CHFR-213ENST00000536843 PLEKHH1Q9ULM0 1364 aa19.93■□□□□ 0.78
CHFR-213ENST00000536843 MRE11P49959 708 aa19.93■□□□□ 0.78
CHFR-213ENST00000536843 CENPJQ9HC77 1338 aaPredicted RBP19.92■□□□□ 0.78
CHFR-213ENST00000536843 NEURL4Q96JN8 1562 aa19.92■□□□□ 0.78
CHFR-213ENST00000536843 HECW2Q9P2P5 1572 aa19.92■□□□□ 0.78
CHFR-213ENST00000536843 SEC24BO95487 1268 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms