RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 SLC26A8Q96RN1 970 aa10.88□□□□□ -0.67
CPSF7-216ENST00000536548 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
CPSF7-216ENST00000536548 MBD5Q9P267 1494 aa10.87□□□□□ -0.67
CPSF7-216ENST00000536548 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
CPSF7-216ENST00000536548 SHPRHQ149N8 1683 aa10.87□□□□□ -0.67
CPSF7-216ENST00000536548 SLIT1O75093 1534 aa10.87□□□□□ -0.67
CPSF7-216ENST00000536548 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
CPSF7-216ENST00000536548 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
CPSF7-216ENST00000536548 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
CPSF7-216ENST00000536548 PRDM15P57071 1507 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-216ENST00000536548 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
CPSF7-216ENST00000536548 MSH6P52701 1360 aa10.86□□□□□ -0.67
CPSF7-216ENST00000536548 CASKIN1Q8WXD9 1431 aa10.85□□□□□ -0.67
CPSF7-216ENST00000536548 ANP32CO43423 234 aa10.85□□□□□ -0.67
CPSF7-216ENST00000536548 QTRT2Q9H974 415 aaKnown RBP10.85□□□□□ -0.67
CPSF7-216ENST00000536548 ABCC3O15438 1527 aa10.84□□□□□ -0.67
CPSF7-216ENST00000536548 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
CPSF7-216ENST00000536548 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-216ENST00000536548 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
CPSF7-216ENST00000536548 BCANQ96GW7 911 aa10.82□□□□□ -0.68
CPSF7-216ENST00000536548 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
CPSF7-216ENST00000536548 RBM19Q9Y4C8 960 aaKnown RBP10.82□□□□□ -0.68
CPSF7-216ENST00000536548 TET3O43151 1660 aa10.82□□□□□ -0.68
CPSF7-216ENST00000536548 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
CPSF7-216ENST00000536548 DIP2AQ14689 1571 aa10.82□□□□□ -0.68
CPSF7-216ENST00000536548 CEP152O94986 1710 aa10.81□□□□□ -0.68
CPSF7-216ENST00000536548 PIK3C2BO00750 1634 aa10.81□□□□□ -0.68
CPSF7-216ENST00000536548 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
CPSF7-216ENST00000536548 AHDC1Q5TGY3 1603 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-216ENST00000536548 TMEM2Q9UHN6 1383 aa10.8□□□□□ -0.68
CPSF7-216ENST00000536548 FOXD1Q16676 465 aa10.8□□□□□ -0.68
CPSF7-216ENST00000536548 NWD1Q149M9 1564 aa10.8□□□□□ -0.68
CPSF7-216ENST00000536548 NKTRP30414 1462 aaKnown RBP10.8□□□□□ -0.68
CPSF7-216ENST00000536548 ITGAEP38570 1179 aa10.79□□□□□ -0.68
CPSF7-216ENST00000536548 ERICH6BQ5W0A0 696 aa10.79□□□□□ -0.68
CPSF7-216ENST00000536548 FANCIQ9NVI1 1328 aa10.78□□□□□ -0.68
CPSF7-216ENST00000536548 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
CPSF7-216ENST00000536548 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
CPSF7-216ENST00000536548 MROH1Q8NDA8 1641 aa10.76□□□□□ -0.69
CPSF7-216ENST00000536548 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
CPSF7-216ENST00000536548 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-216ENST00000536548 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
CPSF7-216ENST00000536548 CHD2O14647 1828 aaKnown RBP10.76□□□□□ -0.69
CPSF7-216ENST00000536548 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
CPSF7-216ENST00000536548 BRINP3Q76B58 766 aa10.75□□□□□ -0.69
CPSF7-216ENST00000536548 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
CPSF7-216ENST00000536548 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
CPSF7-216ENST00000536548 LRP5O75197 1615 aa10.75□□□□□ -0.69
CPSF7-216ENST00000536548 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
CPSF7-216ENST00000536548 ADAMTS2O95450 1211 aa10.74□□□□□ -0.69
CPSF7-216ENST00000536548 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
CPSF7-216ENST00000536548 UTRNP46939 3433 aa10.73□□□□□ -0.69
CPSF7-216ENST00000536548 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
CPSF7-216ENST00000536548 ATF3P18847 181 aa10.72□□□□□ -0.69
CPSF7-216ENST00000536548 IDI1Q13907 227 aa10.72□□□□□ -0.69
CPSF7-216ENST00000536548 FAM50AQ14320 339 aaKnown RBP10.72□□□□□ -0.69
CPSF7-216ENST00000536548 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
CPSF7-216ENST00000536548 DDX17Q92841 729 aaKnown RBP10.72□□□□□ -0.69
CPSF7-216ENST00000536548 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
CPSF7-216ENST00000536548 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
CPSF7-216ENST00000536548 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
CPSF7-216ENST00000536548 SIN3AQ96ST3 1273 aa10.71□□□□□ -0.69
CPSF7-216ENST00000536548 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-216ENST00000536548 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
CPSF7-216ENST00000536548 USP21Q9UK80 565 aa10.7□□□□□ -0.7
CPSF7-216ENST00000536548 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
CPSF7-216ENST00000536548 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
CPSF7-216ENST00000536548 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
CPSF7-216ENST00000536548 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
CPSF7-216ENST00000536548 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 PNPLA6Q8IY17 1366 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 YY1P25490 414 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 RSPH4AQ5TD94 716 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
CPSF7-216ENST00000536548 LRRC59Q96AG4 307 aaKnown RBP10.68□□□□□ -0.7
CPSF7-216ENST00000536548 TRPC5Q9UL62 973 aaPredicted RBP10.68□□□□□ -0.7
CPSF7-216ENST00000536548 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
CPSF7-216ENST00000536548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.66□□□□□ -0.72e-8■■□□□ 13
CPSF7-216ENST00000536548 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
CPSF7-216ENST00000536548 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.7
CPSF7-216ENST00000536548 ARHGEF5Q12774 1597 aa10.65□□□□□ -0.7
CPSF7-216ENST00000536548 HFM1A2PYH4 1435 aa10.65□□□□□ -0.7
CPSF7-216ENST00000536548 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-216ENST00000536548 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPSF7-216ENST00000536548 FNBP4Q8N3X1 1017 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-216ENST00000536548 ATRNO75882 1429 aa10.64□□□□□ -0.71
CPSF7-216ENST00000536548 ADGRB3O60242 1522 aa10.63□□□□□ -0.71
CPSF7-216ENST00000536548 CEP350Q5VT06 3117 aa10.63□□□□□ -0.71
CPSF7-216ENST00000536548 MSH5O43196 834 aa10.63□□□□□ -0.71
CPSF7-216ENST00000536548 PLEKHG1Q9ULL1 1385 aa10.63□□□□□ -0.71
CPSF7-216ENST00000536548 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
CPSF7-216ENST00000536548 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
CPSF7-216ENST00000536548 MST1RQ04912 1400 aa10.62□□□□□ -0.71
CPSF7-216ENST00000536548 TBX22Q9Y458 520 aa10.62□□□□□ -0.71
CPSF7-216ENST00000536548 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
CPSF7-216ENST00000536548 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
CPSF7-216ENST00000536548 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
CPSF7-216ENST00000536548 ADAMTS13Q76LX8 1427 aa10.59□□□□□ -0.71
CPSF7-216ENST00000536548 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms