RNA–Protein interactions for RNA: ENST00000535041.5

LRTM2-202, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM2, Length 3,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-202ENST00000535041 NOS1P29475 1434 aa16.39■□□□□ 0.21
LRTM2-202ENST00000535041 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
LRTM2-202ENST00000535041 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
LRTM2-202ENST00000535041 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
LRTM2-202ENST00000535041 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
LRTM2-202ENST00000535041 FBXO31Q5XUX0 539 aaPredicted RBP16.37■□□□□ 0.21
LRTM2-202ENST00000535041 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
LRTM2-202ENST00000535041 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
LRTM2-202ENST00000535041 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
LRTM2-202ENST00000535041 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
LRTM2-202ENST00000535041 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
LRTM2-202ENST00000535041 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
LRTM2-202ENST00000535041 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
LRTM2-202ENST00000535041 IDI1Q13907 227 aa16.34■□□□□ 0.21
LRTM2-202ENST00000535041 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
LRTM2-202ENST00000535041 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
LRTM2-202ENST00000535041 CENPJQ9HC77 1338 aaPredicted RBP16.34■□□□□ 0.21
LRTM2-202ENST00000535041 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.21
LRTM2-202ENST00000535041 PRDM15P57071 1507 aaPredicted RBP16.33■□□□□ 0.2
LRTM2-202ENST00000535041 IL27Q8NEV9 243 aa16.33■□□□□ 0.2
LRTM2-202ENST00000535041 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
LRTM2-202ENST00000535041 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
LRTM2-202ENST00000535041 CABP2Q9NPB3 220 aa16.32■□□□□ 0.2
LRTM2-202ENST00000535041 TRPM2O94759 1503 aa16.32■□□□□ 0.2
LRTM2-202ENST00000535041 PTPRTO14522 1441 aa16.31■□□□□ 0.2
LRTM2-202ENST00000535041 NPATQ14207 1427 aa16.31■□□□□ 0.2
LRTM2-202ENST00000535041 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
LRTM2-202ENST00000535041 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
LRTM2-202ENST00000535041 CARD14Q9BXL6 1004 aa16.3■□□□□ 0.2
LRTM2-202ENST00000535041 YEATS2Q9ULM3 1422 aa16.3■□□□□ 0.2
LRTM2-202ENST00000535041 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
LRTM2-202ENST00000535041 MINK1Q8N4C8 1332 aaPredicted RBP16.3■□□□□ 0.2
LRTM2-202ENST00000535041 APAF1O14727 1248 aa16.29■□□□□ 0.2
LRTM2-202ENST00000535041 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
LRTM2-202ENST00000535041 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
LRTM2-202ENST00000535041 EIF2AK4Q9P2K8 1649 aaKnown RBP16.29■□□□□ 0.2
LRTM2-202ENST00000535041 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
LRTM2-202ENST00000535041 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
LRTM2-202ENST00000535041 LRPPRCP42704 1394 aaKnown RBP16.28■□□□□ 0.2
LRTM2-202ENST00000535041 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
LRTM2-202ENST00000535041 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
LRTM2-202ENST00000535041 POGKQ9P215 609 aa16.28■□□□□ 0.2
LRTM2-202ENST00000535041 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
LRTM2-202ENST00000535041 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
LRTM2-202ENST00000535041 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.19
LRTM2-202ENST00000535041 MADDQ8WXG6 1647 aa16.26■□□□□ 0.19
LRTM2-202ENST00000535041 TET3O43151 1660 aa16.26■□□□□ 0.19
LRTM2-202ENST00000535041 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
LRTM2-202ENST00000535041 CEP152O94986 1710 aa16.26■□□□□ 0.19
LRTM2-202ENST00000535041 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
LRTM2-202ENST00000535041 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
LRTM2-202ENST00000535041 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
LRTM2-202ENST00000535041 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
LRTM2-202ENST00000535041 PPRC1Q5VV67 1664 aaKnown RBP16.23■□□□□ 0.19
LRTM2-202ENST00000535041 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
LRTM2-202ENST00000535041 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
LRTM2-202ENST00000535041 ERICH6BQ5W0A0 696 aa16.21■□□□□ 0.19
LRTM2-202ENST00000535041 EFCAB6Q5THR3 1501 aa16.21■□□□□ 0.19
LRTM2-202ENST00000535041 MROH1Q8NDA8 1641 aa16.21■□□□□ 0.19
LRTM2-202ENST00000535041 CRBNQ96SW2 442 aa16.21■□□□□ 0.18
LRTM2-202ENST00000535041 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
LRTM2-202ENST00000535041 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
LRTM2-202ENST00000535041 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
LRTM2-202ENST00000535041 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
LRTM2-202ENST00000535041 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
LRTM2-202ENST00000535041 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
LRTM2-202ENST00000535041 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
LRTM2-202ENST00000535041 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
LRTM2-202ENST00000535041 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
LRTM2-202ENST00000535041 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
LRTM2-202ENST00000535041 MTHFSP49914 203 aa16.18■□□□□ 0.18
LRTM2-202ENST00000535041 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
LRTM2-202ENST00000535041 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 DEPDC5O75140 1603 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 FBLN1P23142 703 aa16.17■□□□□ 0.18
LRTM2-202ENST00000535041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
LRTM2-202ENST00000535041 KIF1BO60333 1816 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
LRTM2-202ENST00000535041 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 EVC2Q86UK5 1308 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
LRTM2-202ENST00000535041 MROH2AA6NES4 1674 aa16.15■□□□□ 0.18
LRTM2-202ENST00000535041 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
LRTM2-202ENST00000535041 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
LRTM2-202ENST00000535041 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
LRTM2-202ENST00000535041 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
LRTM2-202ENST00000535041 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
LRTM2-202ENST00000535041 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
LRTM2-202ENST00000535041 MAP3K4Q9Y6R4 1608 aa16.14■□□□□ 0.17
LRTM2-202ENST00000535041 ABCC3O15438 1527 aa16.14■□□□□ 0.17
LRTM2-202ENST00000535041 SLC52A1Q9NWF4 448 aa16.13■□□□□ 0.17
LRTM2-202ENST00000535041 BCAR3O75815 825 aa16.12■□□□□ 0.17
LRTM2-202ENST00000535041 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
LRTM2-202ENST00000535041 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
LRTM2-202ENST00000535041 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms