RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-206ENST00000535038 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
TNFRSF1A-206ENST00000535038 TESPA1A2RU30 521 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-206ENST00000535038 ZPR1O75312 459 aa10.69□□□□□ -0.7
TNFRSF1A-206ENST00000535038 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
TNFRSF1A-206ENST00000535038 Q6ZNB5 142 aa10.69□□□□□ -0.7
TNFRSF1A-206ENST00000535038 GGCXP38435 758 aa10.68□□□□□ -0.7
TNFRSF1A-206ENST00000535038 HIC1Q14526 733 aa10.68□□□□□ -0.7
TNFRSF1A-206ENST00000535038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-206ENST00000535038 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
TNFRSF1A-206ENST00000535038 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
TNFRSF1A-206ENST00000535038 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-206ENST00000535038 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-206ENST00000535038 BLOC1S3Q6QNY0 202 aa10.66□□□□□ -0.7
TNFRSF1A-206ENST00000535038 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-206ENST00000535038 OATP04181 439 aa10.65□□□□□ -0.7
TNFRSF1A-206ENST00000535038 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
TNFRSF1A-206ENST00000535038 CFHP08603 1231 aa10.64□□□□□ -0.71
TNFRSF1A-206ENST00000535038 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-206ENST00000535038 ACTN4O43707 911 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-206ENST00000535038 GFRA3O60609 400 aa10.63□□□□□ -0.71
TNFRSF1A-206ENST00000535038 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
TNFRSF1A-206ENST00000535038 GNPATO15228 680 aa10.61□□□□□ -0.71
TNFRSF1A-206ENST00000535038 SLC10A3P09131 477 aa10.61□□□□□ -0.71
TNFRSF1A-206ENST00000535038 METTL3Q86U44 580 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-206ENST00000535038 TLL1O43897 1013 aa10.6□□□□□ -0.71
TNFRSF1A-206ENST00000535038 FECHP22830 423 aa10.58□□□□□ -0.72
TNFRSF1A-206ENST00000535038 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-206ENST00000535038 GPR37O15354 613 aa10.57□□□□□ -0.72
TNFRSF1A-206ENST00000535038 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
TNFRSF1A-206ENST00000535038 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
TNFRSF1A-206ENST00000535038 NR1I2O75469 434 aa10.55□□□□□ -0.72
TNFRSF1A-206ENST00000535038 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
TNFRSF1A-206ENST00000535038 ADH1BP00325 375 aa10.53□□□□□ -0.72
TNFRSF1A-206ENST00000535038 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
TNFRSF1A-206ENST00000535038 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-206ENST00000535038 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
TNFRSF1A-206ENST00000535038 S1PR4O95977 384 aa10.52□□□□□ -0.73
TNFRSF1A-206ENST00000535038 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
TNFRSF1A-206ENST00000535038 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
TNFRSF1A-206ENST00000535038 SLC19A1P41440 591 aa10.51□□□□□ -0.73
TNFRSF1A-206ENST00000535038 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
TNFRSF1A-206ENST00000535038 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF1A-206ENST00000535038 PUS10Q3MIT2 529 aaKnown RBP10.5□□□□□ -0.73
TNFRSF1A-206ENST00000535038 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
TNFRSF1A-206ENST00000535038 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
TNFRSF1A-206ENST00000535038 LCE2BO14633 110 aa10.49□□□□□ -0.73
TNFRSF1A-206ENST00000535038 SCUBE3Q8IX30 993 aa10.49□□□□□ -0.73
TNFRSF1A-206ENST00000535038 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
TNFRSF1A-206ENST00000535038 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF1A-206ENST00000535038 DCAF1Q9Y4B6 1507 aa10.47□□□□□ -0.73
TNFRSF1A-206ENST00000535038 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
TNFRSF1A-206ENST00000535038 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
TNFRSF1A-206ENST00000535038 PHOX2BQ99453 314 aa10.45□□□□□ -0.74
TNFRSF1A-206ENST00000535038 SPSB2Q99619 263 aa10.45□□□□□ -0.74
TNFRSF1A-206ENST00000535038 FUT2Q10981 343 aa10.44□□□□□ -0.74
TNFRSF1A-206ENST00000535038 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-206ENST00000535038 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF1A-206ENST00000535038 MORN1Q5T089 497 aa10.43□□□□□ -0.74
TNFRSF1A-206ENST00000535038 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
TNFRSF1A-206ENST00000535038 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
TNFRSF1A-206ENST00000535038 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
TNFRSF1A-206ENST00000535038 TRIM67Q6ZTA4 783 aa10.42□□□□□ -0.74
TNFRSF1A-206ENST00000535038 GCGRP47871 477 aa10.41□□□□□ -0.74
TNFRSF1A-206ENST00000535038 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
TNFRSF1A-206ENST00000535038 PRR20EP86478 221 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PRR20CP86479 221 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PRR20DP86480 221 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PRR20BP86481 221 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PRR20AP86496 221 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 MAP2K5Q13163 448 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PLA2G2CQ5R387 149 aa10.39□□□□□ -0.75
TNFRSF1A-206ENST00000535038 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF1A-206ENST00000535038 THAP11Q96EK4 314 aa10.38□□□□□ -0.75
TNFRSF1A-206ENST00000535038 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
TNFRSF1A-206ENST00000535038 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
TNFRSF1A-206ENST00000535038 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
TNFRSF1A-206ENST00000535038 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
TNFRSF1A-206ENST00000535038 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
TNFRSF1A-206ENST00000535038 TNFRSF10AO00220 468 aa10.34□□□□□ -0.75
TNFRSF1A-206ENST00000535038 IRF6O14896 467 aa10.34□□□□□ -0.75
TNFRSF1A-206ENST00000535038 GDF9O60383 454 aa10.34□□□□□ -0.75
TNFRSF1A-206ENST00000535038 FCF1Q9Y324 198 aaKnown RBP10.34□□□□□ -0.75
TNFRSF1A-206ENST00000535038 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-206ENST00000535038 DGAT1O75907 488 aa10.32□□□□□ -0.76
TNFRSF1A-206ENST00000535038 CD46P15529 392 aa10.32□□□□□ -0.76
TNFRSF1A-206ENST00000535038 BRICD5Q6PL45 260 aa10.32□□□□□ -0.76
TNFRSF1A-206ENST00000535038 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1A-206ENST00000535038 FAM187AA6NFU0 413 aa10.31□□□□□ -0.76
TNFRSF1A-206ENST00000535038 ZNF787Q6DD87 383 aa10.31□□□□□ -0.76
TNFRSF1A-206ENST00000535038 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
TNFRSF1A-206ENST00000535038 PRDM9Q9NQV7 894 aa10.31□□□□□ -0.76
TNFRSF1A-206ENST00000535038 RPIAP49247 311 aa10.3□□□□□ -0.76
TNFRSF1A-206ENST00000535038 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-206ENST00000535038 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
TNFRSF1A-206ENST00000535038 MYT1Q01538 1121 aa10.29□□□□□ -0.76
TNFRSF1A-206ENST00000535038 Q3C1V9 767 aa10.29□□□□□ -0.76
TNFRSF1A-206ENST00000535038 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
TNFRSF1A-206ENST00000535038 KDM4AO75164 1064 aa10.28□□□□□ -0.76
TNFRSF1A-206ENST00000535038 FOXC1Q12948 553 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms