RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 SKAP1Q86WV1 359 aa21.08■□□□□ 0.97
ATP2C1-224ENST00000533801 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.96
ATP2C1-224ENST00000533801 RRP7AQ9Y3A4 280 aaKnown RBP21.07■□□□□ 0.96
ATP2C1-224ENST00000533801 CENPJQ9HC77 1338 aaPredicted RBP21.07■□□□□ 0.96
ATP2C1-224ENST00000533801 APAF1O14727 1248 aa21.06■□□□□ 0.96
ATP2C1-224ENST00000533801 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
ATP2C1-224ENST00000533801 AMER1Q5JTC6 1135 aaPredicted RBP21.06■□□□□ 0.96
ATP2C1-224ENST00000533801 CLTCL1P53675 1640 aa21.05■□□□□ 0.96
ATP2C1-224ENST00000533801 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
ATP2C1-224ENST00000533801 MORC1Q86VD1 984 aa21.05■□□□□ 0.96
ATP2C1-224ENST00000533801 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
ATP2C1-224ENST00000533801 SRPK2P78362 688 aaKnown RBP21.05■□□□□ 0.96
ATP2C1-224ENST00000533801 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
ATP2C1-224ENST00000533801 ZNF518AQ6AHZ1 1483 aa21.03■□□□□ 0.96
ATP2C1-224ENST00000533801 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
ATP2C1-224ENST00000533801 IDI1Q13907 227 aa21.02■□□□□ 0.96
ATP2C1-224ENST00000533801 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
ATP2C1-224ENST00000533801 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
ATP2C1-224ENST00000533801 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.95
ATP2C1-224ENST00000533801 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
ATP2C1-224ENST00000533801 POGKQ9P215 609 aa21■□□□□ 0.95
ATP2C1-224ENST00000533801 EIF2AK4Q9P2K8 1649 aaKnown RBP20.99■□□□□ 0.95
ATP2C1-224ENST00000533801 TRPM2O94759 1503 aa20.99■□□□□ 0.95
ATP2C1-224ENST00000533801 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
ATP2C1-224ENST00000533801 PPM1GO15355 546 aaPredicted RBP20.98■□□□□ 0.95
ATP2C1-224ENST00000533801 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
ATP2C1-224ENST00000533801 PTPRTO14522 1441 aa20.97■□□□□ 0.95
ATP2C1-224ENST00000533801 NPATQ14207 1427 aa20.97■□□□□ 0.95
ATP2C1-224ENST00000533801 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
ATP2C1-224ENST00000533801 ANP32EQ9BTT0 268 aa20.96■□□□□ 0.95
ATP2C1-224ENST00000533801 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
ATP2C1-224ENST00000533801 MSH5O43196 834 aa20.95■□□□□ 0.94
ATP2C1-224ENST00000533801 ESF1Q9H501 851 aaKnown RBP20.95■□□□□ 0.94
ATP2C1-224ENST00000533801 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
ATP2C1-224ENST00000533801 POGZQ7Z3K3 1410 aa20.94■□□□□ 0.94
ATP2C1-224ENST00000533801 VGFO15240 615 aaPredicted RBP20.94■□□□□ 0.94
ATP2C1-224ENST00000533801 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
ATP2C1-224ENST00000533801 YEATS2Q9ULM3 1422 aa20.93■□□□□ 0.94
ATP2C1-224ENST00000533801 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
ATP2C1-224ENST00000533801 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
ATP2C1-224ENST00000533801 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
ATP2C1-224ENST00000533801 STAC3Q96MF2 364 aa20.91■□□□□ 0.94
ATP2C1-224ENST00000533801 INO80Q9ULG1 1556 aaPredicted RBP20.91■□□□□ 0.94
ATP2C1-224ENST00000533801 GGNBP2Q9H3C7 697 aa20.91■□□□□ 0.94
ATP2C1-224ENST00000533801 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
ATP2C1-224ENST00000533801 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
ATP2C1-224ENST00000533801 C14orf93Q9H972 538 aaKnown RBP20.9■□□□□ 0.94
ATP2C1-224ENST00000533801 TET3O43151 1660 aa20.9■□□□□ 0.94
ATP2C1-224ENST00000533801 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
ATP2C1-224ENST00000533801 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
ATP2C1-224ENST00000533801 CEP152O94986 1710 aa20.89■□□□□ 0.94
ATP2C1-224ENST00000533801 BCL2L13Q9BXK5 485 aa20.89■□□□□ 0.94
ATP2C1-224ENST00000533801 MTHFSP49914 203 aa20.89■□□□□ 0.93
ATP2C1-224ENST00000533801 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.93
ATP2C1-224ENST00000533801 U2AF1L5P0DN76 240 aaPredicted RBP20.88■□□□□ 0.93
ATP2C1-224ENST00000533801 U2AF1Q01081 240 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATP2C1-224ENST00000533801 PRAM1Q96QH2 718 aa20.88■□□□□ 0.93
ATP2C1-224ENST00000533801 ARAP3Q8WWN8 1544 aa20.88■□□□□ 0.93
ATP2C1-224ENST00000533801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATP2C1-224ENST00000533801 NUTM2FA1L443 756 aa20.87■□□□□ 0.93
ATP2C1-224ENST00000533801 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
ATP2C1-224ENST00000533801 FBLN1P23142 703 aa20.86■□□□□ 0.93
ATP2C1-224ENST00000533801 BCAR3O75815 825 aa20.85■□□□□ 0.93
ATP2C1-224ENST00000533801 NBR1Q14596 966 aa20.85■□□□□ 0.93
ATP2C1-224ENST00000533801 PPRC1Q5VV67 1664 aaKnown RBP20.85■□□□□ 0.93
ATP2C1-224ENST00000533801 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
ATP2C1-224ENST00000533801 EFCAB6Q5THR3 1501 aa20.84■□□□□ 0.93
ATP2C1-224ENST00000533801 RGS3P49796 1198 aa20.84■□□□□ 0.93
ATP2C1-224ENST00000533801 ERVK-7P63135 1459 aa20.83■□□□□ 0.93
ATP2C1-224ENST00000533801 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
ATP2C1-224ENST00000533801 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
ATP2C1-224ENST00000533801 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
ATP2C1-224ENST00000533801 DUSP27Q5VZP5 1158 aa20.81■□□□□ 0.92
ATP2C1-224ENST00000533801 RNF17Q9BXT8 1623 aaKnown RBP20.81■□□□□ 0.92
ATP2C1-224ENST00000533801 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
ATP2C1-224ENST00000533801 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
ATP2C1-224ENST00000533801 MROH1Q8NDA8 1641 aa20.81■□□□□ 0.92
ATP2C1-224ENST00000533801 CFAP53Q96M91 514 aa20.8■□□□□ 0.92
ATP2C1-224ENST00000533801 CGNL1Q0VF96 1302 aa20.8■□□□□ 0.92
ATP2C1-224ENST00000533801 KIF1BO60333 1816 aa20.8■□□□□ 0.92
ATP2C1-224ENST00000533801 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
ATP2C1-224ENST00000533801 CLUAP1Q96AJ1 413 aa20.8■□□□□ 0.92
ATP2C1-224ENST00000533801 TSPOAP1O95153 1857 aa20.79■□□□□ 0.92
ATP2C1-224ENST00000533801 SOX12O15370 315 aa20.79■□□□□ 0.92
ATP2C1-224ENST00000533801 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
ATP2C1-224ENST00000533801 TCP11L2Q8N4U5 519 aa20.77■□□□□ 0.92
ATP2C1-224ENST00000533801 MROH2AA6NES4 1674 aa20.77■□□□□ 0.92
ATP2C1-224ENST00000533801 MAP3K4Q9Y6R4 1608 aa20.77■□□□□ 0.92
ATP2C1-224ENST00000533801 DEPDC5O75140 1603 aa20.77■□□□□ 0.92
ATP2C1-224ENST00000533801 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.91
ATP2C1-224ENST00000533801 MLH3Q9UHC1 1453 aa20.76■□□□□ 0.91
ATP2C1-224ENST00000533801 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
ATP2C1-224ENST00000533801 SLC52A1Q9NWF4 448 aa20.75■□□□□ 0.91
ATP2C1-224ENST00000533801 CABP1Q9NZU7 370 aa20.75■□□□□ 0.91
ATP2C1-224ENST00000533801 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
ATP2C1-224ENST00000533801 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
ATP2C1-224ENST00000533801 LAS1LQ9Y4W2 734 aaKnown RBP20.74■□□□□ 0.91
ATP2C1-224ENST00000533801 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
ATP2C1-224ENST00000533801 ABCC3O15438 1527 aa20.73■□□□□ 0.91
ATP2C1-224ENST00000533801 IQGAP1P46940 1657 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms