RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 ERVK-7P63135 1459 aa15□□□□□ -0.01
PPFIA1-223ENST00000532793 PRDM15P57071 1507 aaPredicted RBP14.99□□□□□ -0.01
PPFIA1-223ENST00000532793 DAPK1P53355 1430 aa14.99□□□□□ -0.01
PPFIA1-223ENST00000532793 KANK1Q14678 1352 aa14.98□□□□□ -0.01
PPFIA1-223ENST00000532793 RRP7BPQ9NSQ0 103 aa14.98□□□□□ -0.01
PPFIA1-223ENST00000532793 NPHP4O75161 1426 aaPredicted RBP14.98□□□□□ -0.01
PPFIA1-223ENST00000532793 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
PPFIA1-223ENST00000532793 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
PPFIA1-223ENST00000532793 ABCC5O15440 1437 aa14.97□□□□□ -0.01
PPFIA1-223ENST00000532793 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
PPFIA1-223ENST00000532793 MED14O60244 1454 aa14.95□□□□□ -0.02
PPFIA1-223ENST00000532793 TOM1O60784 492 aa14.95□□□□□ -0.02
PPFIA1-223ENST00000532793 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
PPFIA1-223ENST00000532793 VWDEQ8N2E2 1590 aa14.93□□□□□ -0.02
PPFIA1-223ENST00000532793 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
PPFIA1-223ENST00000532793 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
PPFIA1-223ENST00000532793 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
PPFIA1-223ENST00000532793 SYNMO15061 1565 aa14.92□□□□□ -0.02
PPFIA1-223ENST00000532793 PIP4K2BP78356 416 aa14.91□□□□□ -0.02
PPFIA1-223ENST00000532793 PIK3C2BO00750 1634 aa14.91□□□□□ -0.02
PPFIA1-223ENST00000532793 SCAF11Q99590 1463 aaKnown RBP14.9□□□□□ -0.02
PPFIA1-223ENST00000532793 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
PPFIA1-223ENST00000532793 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
PPFIA1-223ENST00000532793 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
PPFIA1-223ENST00000532793 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
PPFIA1-223ENST00000532793 SLIT1O75093 1534 aa14.87□□□□□ -0.03
PPFIA1-223ENST00000532793 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
PPFIA1-223ENST00000532793 STRCP1A6NGW2 1772 aa14.87□□□□□ -0.03
PPFIA1-223ENST00000532793 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
PPFIA1-223ENST00000532793 EFCAB6Q5THR3 1501 aa14.86□□□□□ -0.03
PPFIA1-223ENST00000532793 ADGRL2O95490 1459 aa14.85□□□□□ -0.03
PPFIA1-223ENST00000532793 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
PPFIA1-223ENST00000532793 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
PPFIA1-223ENST00000532793 ARHGAP23Q9P227 1491 aa14.84□□□□□ -0.03
PPFIA1-223ENST00000532793 ILDR2Q71H61 639 aa14.83□□□□□ -0.04
PPFIA1-223ENST00000532793 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
PPFIA1-223ENST00000532793 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
PPFIA1-223ENST00000532793 GCC2Q8IWJ2 1684 aa14.82□□□□□ -0.04
PPFIA1-223ENST00000532793 HSPA1LP34931 641 aa14.82□□□□□ -0.04
PPFIA1-223ENST00000532793 TMEM2Q9UHN6 1383 aa14.82□□□□□ -0.04
PPFIA1-223ENST00000532793 TET3O43151 1660 aa14.81□□□□□ -0.04
PPFIA1-223ENST00000532793 SOCS7O14512 581 aa14.81□□□□□ -0.04
PPFIA1-223ENST00000532793 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
PPFIA1-223ENST00000532793 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
PPFIA1-223ENST00000532793 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
PPFIA1-223ENST00000532793 LTKP29376 864 aa14.8□□□□□ -0.04
PPFIA1-223ENST00000532793 MED1Q15648 1581 aaPredicted RBP14.79□□□□□ -0.04
PPFIA1-223ENST00000532793 BCANQ96GW7 911 aa14.79□□□□□ -0.04
PPFIA1-223ENST00000532793 MYO5BQ9ULV0 1848 aa14.78□□□□□ -0.04
PPFIA1-223ENST00000532793 IDI1Q13907 227 aa14.78□□□□□ -0.04
PPFIA1-223ENST00000532793 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
PPFIA1-223ENST00000532793 SLC52A1Q9NWF4 448 aa14.78□□□□□ -0.04
PPFIA1-223ENST00000532793 XIRP1Q702N8 1843 aaKnown RBP14.78□□□□□ -0.04
PPFIA1-223ENST00000532793 UNC13BO14795 1591 aa14.77□□□□□ -0.04
PPFIA1-223ENST00000532793 NOS1P29475 1434 aa14.77□□□□□ -0.04
PPFIA1-223ENST00000532793 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
PPFIA1-223ENST00000532793 POTEMA6NI47 508 aa14.76□□□□□ -0.05
PPFIA1-223ENST00000532793 ZBTB22O15209 634 aa14.76□□□□□ -0.05
PPFIA1-223ENST00000532793 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
PPFIA1-223ENST00000532793 HDGFP51858 240 aaKnown RBP14.75□□□□□ -0.05
PPFIA1-223ENST00000532793 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
PPFIA1-223ENST00000532793 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
PPFIA1-223ENST00000532793 DCBLD2Q96PD2 775 aa14.73□□□□□ -0.05
PPFIA1-223ENST00000532793 E9PCH4 1651 aa14.73□□□□□ -0.05
PPFIA1-223ENST00000532793 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
PPFIA1-223ENST00000532793 CHGAP10645 457 aaKnown RBP14.72□□□□□ -0.05
PPFIA1-223ENST00000532793 ITGAEP38570 1179 aa14.72□□□□□ -0.05
PPFIA1-223ENST00000532793 IQGAP3Q86VI3 1631 aa14.72□□□□□ -0.05
PPFIA1-223ENST00000532793 KCNA6P17658 529 aa14.71□□□□□ -0.05
PPFIA1-223ENST00000532793 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.05
PPFIA1-223ENST00000532793 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
PPFIA1-223ENST00000532793 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
PPFIA1-223ENST00000532793 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
PPFIA1-223ENST00000532793 NKTRP30414 1462 aaKnown RBP14.7□□□□□ -0.06
PPFIA1-223ENST00000532793 CLCN6P51797 869 aa14.7□□□□□ -0.06
PPFIA1-223ENST00000532793 TMEM94Q12767 1356 aa14.7□□□□□ -0.06
PPFIA1-223ENST00000532793 NWD1Q149M9 1564 aa14.69□□□□□ -0.06
PPFIA1-223ENST00000532793 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
PPFIA1-223ENST00000532793 CHD2O14647 1828 aaKnown RBP14.69□□□□□ -0.06
PPFIA1-223ENST00000532793 RIMS2Q9UQ26 1411 aa14.68□□□□□ -0.06
PPFIA1-223ENST00000532793 POTEGQ6S5H5 508 aa14.68□□□□□ -0.06
PPFIA1-223ENST00000532793 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
PPFIA1-223ENST00000532793 NUP155O75694 1391 aa14.67□□□□□ -0.06
PPFIA1-223ENST00000532793 MSH6P52701 1360 aa14.67□□□□□ -0.06
PPFIA1-223ENST00000532793 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
PPFIA1-223ENST00000532793 ROBO1Q9Y6N7 1651 aa14.67□□□□□ -0.06
PPFIA1-223ENST00000532793 ZFYVE9O95405 1425 aa14.66□□□□□ -0.06
PPFIA1-223ENST00000532793 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
PPFIA1-223ENST00000532793 SPHKAPQ2M3C7 1700 aa14.65□□□□□ -0.06
PPFIA1-223ENST00000532793 DIP2AQ14689 1571 aa14.64□□□□□ -0.07
PPFIA1-223ENST00000532793 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
PPFIA1-223ENST00000532793 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
PPFIA1-223ENST00000532793 RBM33Q96EV2 1170 aaKnown RBP14.62□□□□□ -0.07
PPFIA1-223ENST00000532793 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
PPFIA1-223ENST00000532793 TRPM2O94759 1503 aa14.61□□□□□ -0.07
PPFIA1-223ENST00000532793 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
PPFIA1-223ENST00000532793 TBX22Q9Y458 520 aa14.6□□□□□ -0.07
PPFIA1-223ENST00000532793 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
PPFIA1-223ENST00000532793 KIF1BO60333 1816 aa14.59□□□□□ -0.07
PPFIA1-223ENST00000532793 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms