RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 MPHOSPH9Q99550 1183 aa11.92□□□□□ -0.5
TRIM49-202ENST00000532501 SYNMO15061 1565 aa11.91□□□□□ -0.5
TRIM49-202ENST00000532501 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
TRIM49-202ENST00000532501 NOS1P29475 1434 aa11.91□□□□□ -0.5
TRIM49-202ENST00000532501 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
TRIM49-202ENST00000532501 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
TRIM49-202ENST00000532501 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
TRIM49-202ENST00000532501 HRCP23327 699 aa11.89□□□□□ -0.51
TRIM49-202ENST00000532501 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
TRIM49-202ENST00000532501 DHX57Q6P158 1386 aaKnown RBP11.89□□□□□ -0.51
TRIM49-202ENST00000532501 TNRQ92752 1358 aa11.88□□□□□ -0.51
TRIM49-202ENST00000532501 PREX1Q8TCU6 1659 aa11.88□□□□□ -0.51
TRIM49-202ENST00000532501 PTPRTO14522 1441 aa11.87□□□□□ -0.51
TRIM49-202ENST00000532501 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
TRIM49-202ENST00000532501 POTEMA6NI47 508 aa11.86□□□□□ -0.51
TRIM49-202ENST00000532501 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
TRIM49-202ENST00000532501 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
TRIM49-202ENST00000532501 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
TRIM49-202ENST00000532501 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
TRIM49-202ENST00000532501 IDI1Q13907 227 aa11.84□□□□□ -0.51
TRIM49-202ENST00000532501 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
TRIM49-202ENST00000532501 HSPA2P54652 639 aa11.83□□□□□ -0.52
TRIM49-202ENST00000532501 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
TRIM49-202ENST00000532501 TRPM2O94759 1503 aa11.83□□□□□ -0.52
TRIM49-202ENST00000532501 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
TRIM49-202ENST00000532501 SPHKAPQ2M3C7 1700 aa11.81□□□□□ -0.52
TRIM49-202ENST00000532501 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
TRIM49-202ENST00000532501 CEP170BQ9Y4F5 1589 aaPredicted RBP11.81□□□□□ -0.52
TRIM49-202ENST00000532501 A2ML1A8K2U0 1454 aa11.8□□□□□ -0.52
TRIM49-202ENST00000532501 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
TRIM49-202ENST00000532501 NLRP1Q9C000 1473 aa11.79□□□□□ -0.52
TRIM49-202ENST00000532501 POTEGQ6S5H5 508 aa11.78□□□□□ -0.52
TRIM49-202ENST00000532501 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
TRIM49-202ENST00000532501 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
TRIM49-202ENST00000532501 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.52
TRIM49-202ENST00000532501 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
TRIM49-202ENST00000532501 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
TRIM49-202ENST00000532501 SPATA31E1Q6ZUB1 1445 aa11.77□□□□□ -0.53
TRIM49-202ENST00000532501 TMEM131LA2VDJ0 1609 aa11.76□□□□□ -0.53
TRIM49-202ENST00000532501 CLCN6P51797 869 aa11.76□□□□□ -0.53
TRIM49-202ENST00000532501 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
TRIM49-202ENST00000532501 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
TRIM49-202ENST00000532501 UBR1Q8IWV7 1749 aa11.75□□□□□ -0.53
TRIM49-202ENST00000532501 CHGAP10645 457 aaKnown RBP11.75□□□□□ -0.53
TRIM49-202ENST00000532501 SETD1BQ9UPS6 1966 aaKnown RBP11.74□□□□□ -0.53
TRIM49-202ENST00000532501 ARHGAP23Q9P227 1491 aa11.74□□□□□ -0.53
TRIM49-202ENST00000532501 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
TRIM49-202ENST00000532501 LTKP29376 864 aa11.74□□□□□ -0.53
TRIM49-202ENST00000532501 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
TRIM49-202ENST00000532501 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
TRIM49-202ENST00000532501 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
TRIM49-202ENST00000532501 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
TRIM49-202ENST00000532501 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
TRIM49-202ENST00000532501 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
TRIM49-202ENST00000532501 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
TRIM49-202ENST00000532501 SLIT1O75093 1534 aa11.71□□□□□ -0.53
TRIM49-202ENST00000532501 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.53
TRIM49-202ENST00000532501 RGL3Q3MIN7 710 aa11.71□□□□□ -0.53
TRIM49-202ENST00000532501 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
TRIM49-202ENST00000532501 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
TRIM49-202ENST00000532501 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
TRIM49-202ENST00000532501 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
TRIM49-202ENST00000532501 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
TRIM49-202ENST00000532501 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
TRIM49-202ENST00000532501 SCAF11Q99590 1463 aaKnown RBP11.68□□□□□ -0.54
TRIM49-202ENST00000532501 STRCQ7RTU9 1775 aa11.68□□□□□ -0.54
TRIM49-202ENST00000532501 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
TRIM49-202ENST00000532501 ADGRF5Q8IZF2 1346 aa11.67□□□□□ -0.54
TRIM49-202ENST00000532501 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
TRIM49-202ENST00000532501 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
TRIM49-202ENST00000532501 TXNDC2Q86VQ3 553 aa11.66□□□□□ -0.54
TRIM49-202ENST00000532501 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
TRIM49-202ENST00000532501 L3MBTL2Q969R5 705 aa11.65□□□□□ -0.54
TRIM49-202ENST00000532501 KIF1BO60333 1816 aa11.65□□□□□ -0.55
TRIM49-202ENST00000532501 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
TRIM49-202ENST00000532501 ADAMTS13Q76LX8 1427 aa11.64□□□□□ -0.55
TRIM49-202ENST00000532501 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
TRIM49-202ENST00000532501 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
TRIM49-202ENST00000532501 MED14O60244 1454 aa11.63□□□□□ -0.55
TRIM49-202ENST00000532501 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
TRIM49-202ENST00000532501 ASXL1Q8IXJ9 1541 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 PLEKHG1Q9ULL1 1385 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 SLC26A8Q96RN1 970 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
TRIM49-202ENST00000532501 PPLO60437 1756 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 MYOM2P54296 1465 aa11.62□□□□□ -0.55
TRIM49-202ENST00000532501 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
TRIM49-202ENST00000532501 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
TRIM49-202ENST00000532501 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
TRIM49-202ENST00000532501 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
TRIM49-202ENST00000532501 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
TRIM49-202ENST00000532501 IQGAP1P46940 1657 aa11.61□□□□□ -0.55
TRIM49-202ENST00000532501 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
TRIM49-202ENST00000532501 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
TRIM49-202ENST00000532501 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
TRIM49-202ENST00000532501 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
TRIM49-202ENST00000532501 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
TRIM49-202ENST00000532501 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
TRIM49-202ENST00000532501 PTPRUQ92729 1446 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms