RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
CASP4-210ENST00000531546 TMEM134Q9H6X4 195 aa13□□□□□ -0.33
CASP4-210ENST00000531546 KMT5BQ4FZB7 885 aa12.99□□□□□ -0.33
CASP4-210ENST00000531546 BLOC1S3Q6QNY0 202 aa12.98□□□□□ -0.33
CASP4-210ENST00000531546 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
CASP4-210ENST00000531546 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
CASP4-210ENST00000531546 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
CASP4-210ENST00000531546 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
CASP4-210ENST00000531546 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
CASP4-210ENST00000531546 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
CASP4-210ENST00000531546 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
CASP4-210ENST00000531546 CFHP08603 1231 aa12.92□□□□□ -0.34
CASP4-210ENST00000531546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
CASP4-210ENST00000531546 TLL1O43897 1013 aa12.91□□□□□ -0.34
CASP4-210ENST00000531546 FCHSD2O94868 740 aa12.91□□□□□ -0.34
CASP4-210ENST00000531546 SLC19A1P41440 591 aa12.91□□□□□ -0.34
CASP4-210ENST00000531546 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
CASP4-210ENST00000531546 NR1I2O75469 434 aa12.86□□□□□ -0.35
CASP4-210ENST00000531546 ADH1BP00325 375 aa12.86□□□□□ -0.35
CASP4-210ENST00000531546 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
CASP4-210ENST00000531546 ZNF787Q6DD87 383 aa12.86□□□□□ -0.35
CASP4-210ENST00000531546 S1PR4O95977 384 aa12.85□□□□□ -0.35
CASP4-210ENST00000531546 OATP04181 439 aa12.85□□□□□ -0.35
CASP4-210ENST00000531546 SPRYD7Q5W111 196 aa12.85□□□□□ -0.35
CASP4-210ENST00000531546 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
CASP4-210ENST00000531546 PRR20EP86478 221 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 PRR20CP86479 221 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 PRR20DP86480 221 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 PRR20BP86481 221 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 PRR20AP86496 221 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
CASP4-210ENST00000531546 SLC10A3P09131 477 aa12.82□□□□□ -0.36
CASP4-210ENST00000531546 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
CASP4-210ENST00000531546 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
CASP4-210ENST00000531546 SEMA3EO15041 775 aa12.8□□□□□ -0.36
CASP4-210ENST00000531546 HIC1Q14526 733 aa12.8□□□□□ -0.36
CASP4-210ENST00000531546 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
CASP4-210ENST00000531546 DGAT1O75907 488 aa12.79□□□□□ -0.36
CASP4-210ENST00000531546 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
CASP4-210ENST00000531546 SLC6A16Q9GZN6 736 aa12.79□□□□□ -0.36
CASP4-210ENST00000531546 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
CASP4-210ENST00000531546 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
CASP4-210ENST00000531546 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
CASP4-210ENST00000531546 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
CASP4-210ENST00000531546 MYT1Q01538 1121 aa12.73□□□□□ -0.37
CASP4-210ENST00000531546 SPSB2Q99619 263 aa12.72□□□□□ -0.37
CASP4-210ENST00000531546 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
CASP4-210ENST00000531546 GDF9O60383 454 aa12.71□□□□□ -0.37
CASP4-210ENST00000531546 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
CASP4-210ENST00000531546 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
CASP4-210ENST00000531546 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
CASP4-210ENST00000531546 GNPATO15228 680 aa12.69□□□□□ -0.38
CASP4-210ENST00000531546 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
CASP4-210ENST00000531546 PLA2G2CQ5R387 149 aa12.68□□□□□ -0.38
CASP4-210ENST00000531546 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
CASP4-210ENST00000531546 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
CASP4-210ENST00000531546 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
CASP4-210ENST00000531546 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
CASP4-210ENST00000531546 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
CASP4-210ENST00000531546 RPIAP49247 311 aa12.63□□□□□ -0.39
CASP4-210ENST00000531546 MORN1Q5T089 497 aa12.63□□□□□ -0.39
CASP4-210ENST00000531546 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
CASP4-210ENST00000531546 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
CASP4-210ENST00000531546 FUT2Q10981 343 aa12.62□□□□□ -0.39
CASP4-210ENST00000531546 GPR37O15354 613 aa12.61□□□□□ -0.39
CASP4-210ENST00000531546 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
CASP4-210ENST00000531546 FECHP22830 423 aa12.61□□□□□ -0.39
CASP4-210ENST00000531546 FCF1Q9Y324 198 aaKnown RBP12.6□□□□□ -0.39
CASP4-210ENST00000531546 FOXC1Q12948 553 aa12.59□□□□□ -0.39
CASP4-210ENST00000531546 THAP11Q96EK4 314 aa12.59□□□□□ -0.39
CASP4-210ENST00000531546 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
CASP4-210ENST00000531546 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
CASP4-210ENST00000531546 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
CASP4-210ENST00000531546 GCGRP47871 477 aa12.57□□□□□ -0.4
CASP4-210ENST00000531546 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
CASP4-210ENST00000531546 SLC27A5Q9Y2P5 690 aa12.56□□□□□ -0.4
CASP4-210ENST00000531546 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
CASP4-210ENST00000531546 POTECB2RU33 542 aa12.54□□□□□ -0.4
CASP4-210ENST00000531546 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
CASP4-210ENST00000531546 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
CASP4-210ENST00000531546 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
CASP4-210ENST00000531546 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
CASP4-210ENST00000531546 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
CASP4-210ENST00000531546 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
CASP4-210ENST00000531546 CYP4X1Q8N118 509 aa12.52□□□□□ -0.41
CASP4-210ENST00000531546 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
CASP4-210ENST00000531546 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
CASP4-210ENST00000531546 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
CASP4-210ENST00000531546 AVPP01185 164 aa12.5□□□□□ -0.41
CASP4-210ENST00000531546 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
CASP4-210ENST00000531546 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
CASP4-210ENST00000531546 CTC1Q2NKJ3 1217 aa12.49□□□□□ -0.41
CASP4-210ENST00000531546 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
CASP4-210ENST00000531546 Q3C1V9 767 aa12.48□□□□□ -0.41
CASP4-210ENST00000531546 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.41
CASP4-210ENST00000531546 AXIN1O15169 862 aa12.45□□□□□ -0.42
CASP4-210ENST00000531546 TTC24A2A3L6 582 aaPredicted RBP12.43□□□□□ -0.42
CASP4-210ENST00000531546 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms