RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
PPM1A-206ENST00000531143 AHDC1Q5TGY3 1603 aaPredicted RBP11.9□□□□□ -0.5
PPM1A-206ENST00000531143 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
PPM1A-206ENST00000531143 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
PPM1A-206ENST00000531143 NCOA2Q15596 1464 aa11.9□□□□□ -0.51
PPM1A-206ENST00000531143 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.51
PPM1A-206ENST00000531143 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.51
PPM1A-206ENST00000531143 ZNF777Q9ULD5 760 aaPredicted RBP11.89□□□□□ -0.51
PPM1A-206ENST00000531143 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
PPM1A-206ENST00000531143 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
PPM1A-206ENST00000531143 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
PPM1A-206ENST00000531143 ABCC3O15438 1527 aa11.86□□□□□ -0.51
PPM1A-206ENST00000531143 SLIT1O75093 1534 aa11.86□□□□□ -0.51
PPM1A-206ENST00000531143 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
PPM1A-206ENST00000531143 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
PPM1A-206ENST00000531143 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
PPM1A-206ENST00000531143 KIF3BO15066 747 aa11.85□□□□□ -0.51
PPM1A-206ENST00000531143 DHX29Q7Z478 1369 aaKnown RBP11.85□□□□□ -0.51
PPM1A-206ENST00000531143 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
PPM1A-206ENST00000531143 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
PPM1A-206ENST00000531143 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
PPM1A-206ENST00000531143 ERVK-7P63135 1459 aa11.82□□□□□ -0.52
PPM1A-206ENST00000531143 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
PPM1A-206ENST00000531143 MYT1Q01538 1121 aa11.81□□□□□ -0.52
PPM1A-206ENST00000531143 ZNF784Q8NCA9 323 aaPredicted RBP11.81□□□□□ -0.52
PPM1A-206ENST00000531143 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
PPM1A-206ENST00000531143 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
PPM1A-206ENST00000531143 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
PPM1A-206ENST00000531143 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
PPM1A-206ENST00000531143 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
PPM1A-206ENST00000531143 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
PPM1A-206ENST00000531143 MAST1Q9Y2H9 1570 aa11.8□□□□□ -0.52
PPM1A-206ENST00000531143 ATRNO75882 1429 aa11.8□□□□□ -0.52
PPM1A-206ENST00000531143 USP21Q9UK80 565 aa11.8□□□□□ -0.52
PPM1A-206ENST00000531143 CDC42BPAQ5VT25 1732 aa11.78□□□□□ -0.52
PPM1A-206ENST00000531143 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
PPM1A-206ENST00000531143 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
PPM1A-206ENST00000531143 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
PPM1A-206ENST00000531143 TET3O43151 1660 aa11.77□□□□□ -0.52
PPM1A-206ENST00000531143 ZEB1P37275 1124 aaPredicted RBP11.77□□□□□ -0.52
PPM1A-206ENST00000531143 FMN1Q68DA7 1419 aa11.77□□□□□ -0.53
PPM1A-206ENST00000531143 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.53
PPM1A-206ENST00000531143 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
PPM1A-206ENST00000531143 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
PPM1A-206ENST00000531143 FNBP4Q8N3X1 1017 aaPredicted RBP11.75□□□□□ -0.53
PPM1A-206ENST00000531143 RTEL1-TNFRSF6BF6WH68 1400 aa11.74□□□□□ -0.53
PPM1A-206ENST00000531143 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
PPM1A-206ENST00000531143 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
PPM1A-206ENST00000531143 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
PPM1A-206ENST00000531143 R3HDM1Q15032 1099 aaKnown RBP11.73□□□□□ -0.53
PPM1A-206ENST00000531143 POTEHQ6S545 545 aa11.73□□□□□ -0.53
PPM1A-206ENST00000531143 PCGF6Q9BYE7 350 aa11.73□□□□□ -0.53
PPM1A-206ENST00000531143 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
PPM1A-206ENST00000531143 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
PPM1A-206ENST00000531143 UTRNP46939 3433 aa11.71□□□□□ -0.53
PPM1A-206ENST00000531143 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
PPM1A-206ENST00000531143 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.54
PPM1A-206ENST00000531143 MBD5Q9P267 1494 aa11.71□□□□□ -0.54
PPM1A-206ENST00000531143 ATF3P18847 181 aa11.7□□□□□ -0.54
PPM1A-206ENST00000531143 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
PPM1A-206ENST00000531143 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
PPM1A-206ENST00000531143 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
PPM1A-206ENST00000531143 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
PPM1A-206ENST00000531143 ZNF644Q9H582 1327 aaPredicted RBP11.7□□□□□ -0.54
PPM1A-206ENST00000531143 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
PPM1A-206ENST00000531143 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
PPM1A-206ENST00000531143 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
PPM1A-206ENST00000531143 UNC13BO14795 1591 aa11.68□□□□□ -0.54
PPM1A-206ENST00000531143 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.67□□□□□ -0.54
PPM1A-206ENST00000531143 SLC34A2O95436 690 aa11.65□□□□□ -0.54
PPM1A-206ENST00000531143 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
PPM1A-206ENST00000531143 BAG6P46379 1132 aa11.65□□□□□ -0.55
PPM1A-206ENST00000531143 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
PPM1A-206ENST00000531143 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
PPM1A-206ENST00000531143 EFCAB6Q5THR3 1501 aa11.63□□□□□ -0.55
PPM1A-206ENST00000531143 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
PPM1A-206ENST00000531143 CASKIN1Q8WXD9 1431 aa11.62□□□□□ -0.55
PPM1A-206ENST00000531143 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
PPM1A-206ENST00000531143 BCANQ96GW7 911 aa11.62□□□□□ -0.55
PPM1A-206ENST00000531143 MST1RQ04912 1400 aa11.62□□□□□ -0.55
PPM1A-206ENST00000531143 CCDC18Q5T9S5 1454 aa11.61□□□□□ -0.55
PPM1A-206ENST00000531143 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
PPM1A-206ENST00000531143 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
PPM1A-206ENST00000531143 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
PPM1A-206ENST00000531143 GLI3P10071 1580 aa11.6□□□□□ -0.55
PPM1A-206ENST00000531143 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
PPM1A-206ENST00000531143 DCCP43146 1447 aa11.59□□□□□ -0.55
PPM1A-206ENST00000531143 IDI1Q13907 227 aa11.59□□□□□ -0.55
PPM1A-206ENST00000531143 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
PPM1A-206ENST00000531143 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
PPM1A-206ENST00000531143 ARHGAP31Q2M1Z3 1444 aa11.58□□□□□ -0.56
PPM1A-206ENST00000531143 FYCO1Q9BQS8 1478 aa11.58□□□□□ -0.56
PPM1A-206ENST00000531143 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
PPM1A-206ENST00000531143 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
PPM1A-206ENST00000531143 CEP162Q5TB80 1403 aa11.57□□□□□ -0.56
PPM1A-206ENST00000531143 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
PPM1A-206ENST00000531143 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
PPM1A-206ENST00000531143 PPP1R1BQ9UD71 204 aaPredicted RBP11.56□□□□□ -0.56
PPM1A-206ENST00000531143 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
PPM1A-206ENST00000531143 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms