RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 PCDHB3Q9Y5E6 796 aa8.09□□□□□ -1.11
NUP98-218ENST00000530516 ZPR1O75312 459 aa8.08□□□□□ -1.12
NUP98-218ENST00000530516 ADGRG1Q9Y653 693 aa8.08□□□□□ -1.12
NUP98-218ENST00000530516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
NUP98-218ENST00000530516 NUTM2FA1L443 756 aa8.07□□□□□ -1.12
NUP98-218ENST00000530516 COPS2P61201 443 aa8.07□□□□□ -1.12
NUP98-218ENST00000530516 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
NUP98-218ENST00000530516 OATP04181 439 aa8.06□□□□□ -1.12
NUP98-218ENST00000530516 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
NUP98-218ENST00000530516 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
NUP98-218ENST00000530516 RCCD1A6NED2 376 aa8.04□□□□□ -1.12
NUP98-218ENST00000530516 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
NUP98-218ENST00000530516 HIC1Q14526 733 aa8.03□□□□□ -1.12
NUP98-218ENST00000530516 NKX2-3Q8TAU0 364 aa8.03□□□□□ -1.12
NUP98-218ENST00000530516 NR1I2O75469 434 aa8.01□□□□□ -1.13
NUP98-218ENST00000530516 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
NUP98-218ENST00000530516 SEMA3EO15041 775 aa8□□□□□ -1.13
NUP98-218ENST00000530516 CFHP08603 1231 aa8□□□□□ -1.13
NUP98-218ENST00000530516 PDZRN3Q9UPQ7 1066 aa8□□□□□ -1.13
NUP98-218ENST00000530516 ANKLE1Q8NAG6 615 aa7.99□□□□□ -1.13
NUP98-218ENST00000530516 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
NUP98-218ENST00000530516 TESPA1A2RU30 521 aaPredicted RBP7.98□□□□□ -1.13
NUP98-218ENST00000530516 VSIG10Q8N0Z9 540 aa7.98□□□□□ -1.13
NUP98-218ENST00000530516 RNF223E7ERA6 249 aa7.97□□□□□ -1.13
NUP98-218ENST00000530516 ADH1BP00325 375 aa7.97□□□□□ -1.13
NUP98-218ENST00000530516 SLC19A1P41440 591 aa7.97□□□□□ -1.13
NUP98-218ENST00000530516 METTL3Q86U44 580 aaKnown RBP7.96□□□□□ -1.14
NUP98-218ENST00000530516 GNPATO15228 680 aa7.95□□□□□ -1.14
NUP98-218ENST00000530516 SLC10A3P09131 477 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 PRR20EP86478 221 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 PRR20CP86479 221 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 PRR20DP86480 221 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 PRR20BP86481 221 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 PRR20AP86496 221 aa7.94□□□□□ -1.14
NUP98-218ENST00000530516 ZNF598Q86UK7 904 aaKnown RBP7.94□□□□□ -1.14
NUP98-218ENST00000530516 FAM161AQ3B820 660 aa7.93□□□□□ -1.14
NUP98-218ENST00000530516 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
NUP98-218ENST00000530516 DAXXQ9UER7 740 aaPredicted RBP7.93□□□□□ -1.14
NUP98-218ENST00000530516 TLL1O43897 1013 aa7.92□□□□□ -1.14
NUP98-218ENST00000530516 S1PR4O95977 384 aa7.92□□□□□ -1.14
NUP98-218ENST00000530516 SULF1Q8IWU6 871 aa7.92□□□□□ -1.14
NUP98-218ENST00000530516 SLC6A16Q9GZN6 736 aa7.92□□□□□ -1.14
NUP98-218ENST00000530516 LCE2BO14633 110 aa7.91□□□□□ -1.14
NUP98-218ENST00000530516 DGAT1O75907 488 aa7.91□□□□□ -1.14
NUP98-218ENST00000530516 LMOD2Q6P5Q4 547 aa7.9□□□□□ -1.14
NUP98-218ENST00000530516 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
NUP98-218ENST00000530516 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
NUP98-218ENST00000530516 RBM26Q5T8P6 1007 aaKnown RBP7.89□□□□□ -1.15
NUP98-218ENST00000530516 SPSB2Q99619 263 aa7.89□□□□□ -1.15
NUP98-218ENST00000530516 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
NUP98-218ENST00000530516 RDH13Q8NBN7 331 aa7.88□□□□□ -1.15
NUP98-218ENST00000530516 GPR37O15354 613 aa7.87□□□□□ -1.15
NUP98-218ENST00000530516 ATP6V1AP38606 617 aa7.87□□□□□ -1.15
NUP98-218ENST00000530516 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
NUP98-218ENST00000530516 TRIM67Q6ZTA4 783 aa7.87□□□□□ -1.15
NUP98-218ENST00000530516 SALL2Q9Y467 1007 aaPredicted RBP7.87□□□□□ -1.15
NUP98-218ENST00000530516 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
NUP98-218ENST00000530516 RPIAP49247 311 aa7.86□□□□□ -1.15
NUP98-218ENST00000530516 ZNF787Q6DD87 383 aa7.86□□□□□ -1.15
NUP98-218ENST00000530516 EMID1Q96A84 441 aaPredicted RBP7.86□□□□□ -1.15
NUP98-218ENST00000530516 FMNL1O95466 1100 aaPredicted RBP7.85□□□□□ -1.15
NUP98-218ENST00000530516 MORN1Q5T089 497 aa7.85□□□□□ -1.15
NUP98-218ENST00000530516 LIAT1Q6ZQX7 453 aa7.85□□□□□ -1.15
NUP98-218ENST00000530516 GPIHBP1Q8IV16 184 aa7.85□□□□□ -1.15
NUP98-218ENST00000530516 DDX11L8A8MPP1 907 aa7.84□□□□□ -1.15
NUP98-218ENST00000530516 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
NUP98-218ENST00000530516 GDF9O60383 454 aa7.84□□□□□ -1.15
NUP98-218ENST00000530516 GCGRP47871 477 aa7.84□□□□□ -1.15
NUP98-218ENST00000530516 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
NUP98-218ENST00000530516 CD2BP2O95400 341 aaKnown RBP7.82□□□□□ -1.16
NUP98-218ENST00000530516 FECHP22830 423 aa7.82□□□□□ -1.16
NUP98-218ENST00000530516 FUT2Q10981 343 aa7.82□□□□□ -1.16
NUP98-218ENST00000530516 THAP11Q96EK4 314 aa7.82□□□□□ -1.16
NUP98-218ENST00000530516 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
NUP98-218ENST00000530516 MYT1Q01538 1121 aa7.81□□□□□ -1.16
NUP98-218ENST00000530516 Q3C1V9 767 aa7.81□□□□□ -1.16
NUP98-218ENST00000530516 FAM187AA6NFU0 413 aa7.8□□□□□ -1.16
NUP98-218ENST00000530516 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
NUP98-218ENST00000530516 MAP2K5Q13163 448 aa7.79□□□□□ -1.16
NUP98-218ENST00000530516 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
NUP98-218ENST00000530516 SLC27A5Q9Y2P5 690 aa7.79□□□□□ -1.16
NUP98-218ENST00000530516 BRICD5Q6PL45 260 aa7.78□□□□□ -1.16
NUP98-218ENST00000530516 FCF1Q9Y324 198 aaKnown RBP7.78□□□□□ -1.16
NUP98-218ENST00000530516 TNFRSF10AO00220 468 aa7.77□□□□□ -1.17
NUP98-218ENST00000530516 ZBTB24O43167 697 aaPredicted RBP7.77□□□□□ -1.17
NUP98-218ENST00000530516 USP46P62068 366 aa7.76□□□□□ -1.17
NUP98-218ENST00000530516 CRIPAKQ8N1N5 446 aa7.76□□□□□ -1.17
NUP98-218ENST00000530516 FAM160A2Q8N612 972 aaPredicted RBP7.76□□□□□ -1.17
NUP98-218ENST00000530516 PHOX2BQ99453 314 aa7.76□□□□□ -1.17
NUP98-218ENST00000530516 CD46P15529 392 aa7.75□□□□□ -1.17
NUP98-218ENST00000530516 PKD2L1Q9P0L9 805 aa7.75□□□□□ -1.17
NUP98-218ENST00000530516 MINK1Q8N4C8 1332 aaPredicted RBP7.75□□□□□ -1.17
NUP98-218ENST00000530516 FOXC1Q12948 553 aa7.74□□□□□ -1.17
NUP98-218ENST00000530516 CTC1Q2NKJ3 1217 aa7.74□□□□□ -1.17
NUP98-218ENST00000530516 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
NUP98-218ENST00000530516 AVPP01185 164 aa7.73□□□□□ -1.17
NUP98-218ENST00000530516 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
NUP98-218ENST00000530516 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms