RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
CMTM1-214ENST00000530141 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
CMTM1-214ENST00000530141 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
CMTM1-214ENST00000530141 UGGT1Q9NYU2 1555 aa11.89□□□□□ -0.51
CMTM1-214ENST00000530141 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
CMTM1-214ENST00000530141 PZPP20742 1482 aa11.89□□□□□ -0.51
CMTM1-214ENST00000530141 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
CMTM1-214ENST00000530141 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
CMTM1-214ENST00000530141 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
CMTM1-214ENST00000530141 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
CMTM1-214ENST00000530141 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
CMTM1-214ENST00000530141 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
CMTM1-214ENST00000530141 CHIC2Q9UKJ5 165 aa11.86□□□□□ -0.51
CMTM1-214ENST00000530141 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
CMTM1-214ENST00000530141 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
CMTM1-214ENST00000530141 MED14O60244 1454 aa11.85□□□□□ -0.51
CMTM1-214ENST00000530141 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
CMTM1-214ENST00000530141 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
CMTM1-214ENST00000530141 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
CMTM1-214ENST00000530141 KIF3BO15066 747 aa11.84□□□□□ -0.51
CMTM1-214ENST00000530141 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
CMTM1-214ENST00000530141 MBD5Q9P267 1494 aa11.83□□□□□ -0.52
CMTM1-214ENST00000530141 CEP152O94986 1710 aa11.83□□□□□ -0.52
CMTM1-214ENST00000530141 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-214ENST00000530141 CROCC2H7BZ55 1655 aa11.83□□□□□ -0.52
CMTM1-214ENST00000530141 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
CMTM1-214ENST00000530141 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
CMTM1-214ENST00000530141 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
CMTM1-214ENST00000530141 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
CMTM1-214ENST00000530141 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-214ENST00000530141 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
CMTM1-214ENST00000530141 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
CMTM1-214ENST00000530141 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
CMTM1-214ENST00000530141 ABCC3O15438 1527 aa11.78□□□□□ -0.52
CMTM1-214ENST00000530141 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-214ENST00000530141 MAST1Q9Y2H9 1570 aa11.78□□□□□ -0.52
CMTM1-214ENST00000530141 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
CMTM1-214ENST00000530141 ERVK-7P63135 1459 aa11.77□□□□□ -0.52
CMTM1-214ENST00000530141 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
CMTM1-214ENST00000530141 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
CMTM1-214ENST00000530141 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
CMTM1-214ENST00000530141 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
CMTM1-214ENST00000530141 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
CMTM1-214ENST00000530141 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
CMTM1-214ENST00000530141 PHLPP1O60346 1717 aa11.75□□□□□ -0.53
CMTM1-214ENST00000530141 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
CMTM1-214ENST00000530141 LTKP29376 864 aa11.74□□□□□ -0.53
CMTM1-214ENST00000530141 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
CMTM1-214ENST00000530141 KIF15Q9NS87 1388 aa11.74□□□□□ -0.53
CMTM1-214ENST00000530141 LRP6O75581 1613 aa11.74□□□□□ -0.53
CMTM1-214ENST00000530141 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
CMTM1-214ENST00000530141 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
CMTM1-214ENST00000530141 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
CMTM1-214ENST00000530141 TMEM94Q12767 1356 aa11.72□□□□□ -0.53
CMTM1-214ENST00000530141 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
CMTM1-214ENST00000530141 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
CMTM1-214ENST00000530141 FAM135BQ49AJ0 1406 aa11.7□□□□□ -0.54
CMTM1-214ENST00000530141 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
CMTM1-214ENST00000530141 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-214ENST00000530141 SLIT1O75093 1534 aa11.7□□□□□ -0.54
CMTM1-214ENST00000530141 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
CMTM1-214ENST00000530141 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
CMTM1-214ENST00000530141 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-214ENST00000530141 UPF1Q92900 1129 aaKnown RBP eCLIP11.69□□□□□ -0.54
CMTM1-214ENST00000530141 TXNDC2Q86VQ3 553 aa11.68□□□□□ -0.54
CMTM1-214ENST00000530141 NUP155O75694 1391 aa11.67□□□□□ -0.54
CMTM1-214ENST00000530141 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
CMTM1-214ENST00000530141 EIF2AK4Q9P2K8 1649 aaKnown RBP11.67□□□□□ -0.54
CMTM1-214ENST00000530141 PROM2Q8N271 834 aa11.66□□□□□ -0.54
CMTM1-214ENST00000530141 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
CMTM1-214ENST00000530141 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
CMTM1-214ENST00000530141 SLC26A8Q96RN1 970 aa11.65□□□□□ -0.54
CMTM1-214ENST00000530141 NWD1Q149M9 1564 aa11.65□□□□□ -0.54
CMTM1-214ENST00000530141 KDM5AP29375 1690 aaKnown RBP11.63□□□□□ -0.55
CMTM1-214ENST00000530141 FKBP8Q14318 412 aa11.63□□□□□ -0.55
CMTM1-214ENST00000530141 PROSER2Q86WR7 435 aaPredicted RBP11.63□□□□□ -0.55
CMTM1-214ENST00000530141 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
CMTM1-214ENST00000530141 PRDM15P57071 1507 aaPredicted RBP11.63□□□□□ -0.55
CMTM1-214ENST00000530141 JCADQ9P266 1359 aa11.63□□□□□ -0.55
CMTM1-214ENST00000530141 MYO5BQ9ULV0 1848 aa11.63□□□□□ -0.55
CMTM1-214ENST00000530141 UNC13BO14795 1591 aa11.62□□□□□ -0.55
CMTM1-214ENST00000530141 TET3O43151 1660 aa11.62□□□□□ -0.55
CMTM1-214ENST00000530141 EFCAB6Q5THR3 1501 aa11.61□□□□□ -0.55
CMTM1-214ENST00000530141 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
CMTM1-214ENST00000530141 TMEM2Q9UHN6 1383 aa11.61□□□□□ -0.55
CMTM1-214ENST00000530141 SHPRHQ149N8 1683 aa11.6□□□□□ -0.55
CMTM1-214ENST00000530141 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
CMTM1-214ENST00000530141 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
CMTM1-214ENST00000530141 MSH6P52701 1360 aa11.58□□□□□ -0.56
CMTM1-214ENST00000530141 KANK1Q14678 1352 aa11.58□□□□□ -0.56
CMTM1-214ENST00000530141 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
CMTM1-214ENST00000530141 KCNA6P17658 529 aa11.58□□□□□ -0.56
CMTM1-214ENST00000530141 RGS12O14924 1447 aa11.58□□□□□ -0.56
CMTM1-214ENST00000530141 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
CMTM1-214ENST00000530141 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
CMTM1-214ENST00000530141 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
CMTM1-214ENST00000530141 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-214ENST00000530141 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-214ENST00000530141 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
CMTM1-214ENST00000530141 DIP2AQ14689 1571 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms