RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 NUP155O75694 1391 aa11.82□□□□□ -0.52
CCDC90B-212ENST00000529312 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-212ENST00000529312 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-212ENST00000529312 KCNA6P17658 529 aa11.82□□□□□ -0.52
CCDC90B-212ENST00000529312 RPRD2Q5VT52 1461 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-212ENST00000529312 CEP152O94986 1710 aa11.81□□□□□ -0.52
CCDC90B-212ENST00000529312 NOS1P29475 1434 aa11.81□□□□□ -0.52
CCDC90B-212ENST00000529312 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
CCDC90B-212ENST00000529312 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-212ENST00000529312 ARHGAP23Q9P227 1491 aa11.8□□□□□ -0.52
CCDC90B-212ENST00000529312 SLIT1O75093 1534 aa11.8□□□□□ -0.52
CCDC90B-212ENST00000529312 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
CCDC90B-212ENST00000529312 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
CCDC90B-212ENST00000529312 SLC26A8Q96RN1 970 aa11.79□□□□□ -0.52
CCDC90B-212ENST00000529312 POLR1AO95602 1720 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-212ENST00000529312 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
CCDC90B-212ENST00000529312 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.52
CCDC90B-212ENST00000529312 HSPA1LP34931 641 aa11.77□□□□□ -0.53
CCDC90B-212ENST00000529312 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.53
CCDC90B-212ENST00000529312 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
CCDC90B-212ENST00000529312 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-212ENST00000529312 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
CCDC90B-212ENST00000529312 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-212ENST00000529312 LRRC7Q96NW7 1537 aa11.74□□□□□ -0.53
CCDC90B-212ENST00000529312 KDM5AP29375 1690 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-212ENST00000529312 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
CCDC90B-212ENST00000529312 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-212ENST00000529312 RRBP1Q9P2E9 1410 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-212ENST00000529312 PLEKHG1Q9ULL1 1385 aa11.73□□□□□ -0.53
CCDC90B-212ENST00000529312 RIMS2Q9UQ26 1411 aa11.73□□□□□ -0.53
CCDC90B-212ENST00000529312 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-212ENST00000529312 TET3O43151 1660 aa11.71□□□□□ -0.53
CCDC90B-212ENST00000529312 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
CCDC90B-212ENST00000529312 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-212ENST00000529312 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
CCDC90B-212ENST00000529312 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-212ENST00000529312 SYNMO15061 1565 aa11.7□□□□□ -0.54
CCDC90B-212ENST00000529312 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
CCDC90B-212ENST00000529312 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-212ENST00000529312 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
CCDC90B-212ENST00000529312 UNC13BO14795 1591 aa11.69□□□□□ -0.54
CCDC90B-212ENST00000529312 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
CCDC90B-212ENST00000529312 MSH6P52701 1360 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 SOCS7O14512 581 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 NCOA3Q9Y6Q9 1424 aa11.68□□□□□ -0.54
CCDC90B-212ENST00000529312 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
CCDC90B-212ENST00000529312 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
CCDC90B-212ENST00000529312 GCC2Q8IWJ2 1684 aa11.67□□□□□ -0.54
CCDC90B-212ENST00000529312 NAIPQ13075 1403 aa11.67□□□□□ -0.54
CCDC90B-212ENST00000529312 RPGRIP1LQ68CZ1 1315 aa11.66□□□□□ -0.54
CCDC90B-212ENST00000529312 ATF3P18847 181 aa11.66□□□□□ -0.54
CCDC90B-212ENST00000529312 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
CCDC90B-212ENST00000529312 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-212ENST00000529312 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
CCDC90B-212ENST00000529312 TMEM131LA2VDJ0 1609 aa11.64□□□□□ -0.55
CCDC90B-212ENST00000529312 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
CCDC90B-212ENST00000529312 E9PCH4 1651 aa11.63□□□□□ -0.55
CCDC90B-212ENST00000529312 STRCP1A6NGW2 1772 aa11.63□□□□□ -0.55
CCDC90B-212ENST00000529312 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-212ENST00000529312 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
CCDC90B-212ENST00000529312 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
CCDC90B-212ENST00000529312 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
CCDC90B-212ENST00000529312 CHD2O14647 1828 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-212ENST00000529312 DIP2AQ14689 1571 aa11.57□□□□□ -0.56
CCDC90B-212ENST00000529312 TRPM2O94759 1503 aa11.56□□□□□ -0.56
CCDC90B-212ENST00000529312 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
CCDC90B-212ENST00000529312 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
CCDC90B-212ENST00000529312 NWD1Q149M9 1564 aa11.55□□□□□ -0.56
CCDC90B-212ENST00000529312 HRCP23327 699 aa11.55□□□□□ -0.56
CCDC90B-212ENST00000529312 POLA2Q14181 598 aa11.55□□□□□ -0.56
CCDC90B-212ENST00000529312 JCADQ9P266 1359 aa11.54□□□□□ -0.56
CCDC90B-212ENST00000529312 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
CCDC90B-212ENST00000529312 SPHKAPQ2M3C7 1700 aa11.54□□□□□ -0.56
CCDC90B-212ENST00000529312 METP08581 1390 aa11.54□□□□□ -0.56
CCDC90B-212ENST00000529312 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
CCDC90B-212ENST00000529312 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-212ENST00000529312 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
CCDC90B-212ENST00000529312 XIRP1Q702N8 1843 aaKnown RBP11.53□□□□□ -0.56
CCDC90B-212ENST00000529312 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
CCDC90B-212ENST00000529312 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
CCDC90B-212ENST00000529312 BRINP3Q76B58 766 aa11.52□□□□□ -0.57
CCDC90B-212ENST00000529312 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
CCDC90B-212ENST00000529312 KIF1BO60333 1816 aa11.51□□□□□ -0.57
CCDC90B-212ENST00000529312 MED1Q15648 1581 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-212ENST00000529312 SETBP1Q9Y6X0 1596 aa11.51□□□□□ -0.57
CCDC90B-212ENST00000529312 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
CCDC90B-212ENST00000529312 DCCP43146 1447 aa11.51□□□□□ -0.57
CCDC90B-212ENST00000529312 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-212ENST00000529312 KCNA4P22459 653 aa11.49□□□□□ -0.57
CCDC90B-212ENST00000529312 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-212ENST00000529312 SIRT1Q96EB6 747 aa11.49□□□□□ -0.57
CCDC90B-212ENST00000529312 RGS17Q9UGC6 210 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-212ENST00000529312 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
CCDC90B-212ENST00000529312 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
CCDC90B-212ENST00000529312 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
CCDC90B-212ENST00000529312 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
CCDC90B-212ENST00000529312 C14orf93Q9H972 538 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms