RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	STAG3	Q9UJ98	1225 aa		11.5	□□□□□ -0.57
MS4A6A-208	ENST00000528851	IQGAP3	Q86VI3	1631 aa		11.49	□□□□□ -0.57
MS4A6A-208	ENST00000528851	TET3	O43151	1660 aa		11.49	□□□□□ -0.57
MS4A6A-208	ENST00000528851	RAB3GAP2	Q9H2M9	1393 aa		11.49	□□□□□ -0.57
MS4A6A-208	ENST00000528851	HDGF	P51858	240 aa	Known RBP	11.49	□□□□□ -0.57
MS4A6A-208	ENST00000528851	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.48	□□□□□ -0.57
MS4A6A-208	ENST00000528851	PLA2R1	Q13018	1463 aa		11.47	□□□□□ -0.57
MS4A6A-208	ENST00000528851	PTPRT	O14522	1441 aa		11.47	□□□□□ -0.57
MS4A6A-208	ENST00000528851	UGGT1	Q9NYU2	1555 aa		11.47	□□□□□ -0.57
MS4A6A-208	ENST00000528851	NCKAP5L	Q9HCH0	1330 aa		11.47	□□□□□ -0.57
MS4A6A-208	ENST00000528851	MYO3A	Q8NEV4	1616 aa		11.46	□□□□□ -0.57
MS4A6A-208	ENST00000528851	EID1	Q9Y6B2	187 aa		11.46	□□□□□ -0.58
MS4A6A-208	ENST00000528851	TXNDC2	Q86VQ3	553 aa		11.45	□□□□□ -0.58
MS4A6A-208	ENST00000528851	ZNF142	P52746	1687 aa	Predicted RBP	11.44	□□□□□ -0.58
MS4A6A-208	ENST00000528851	CHGA	P10645	457 aa	Known RBP	11.43	□□□□□ -0.58
MS4A6A-208	ENST00000528851	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
MS4A6A-208	ENST00000528851		E9PCH4	1651 aa		11.43	□□□□□ -0.58
MS4A6A-208	ENST00000528851	TMEM2	Q9UHN6	1383 aa		11.43	□□□□□ -0.58
MS4A6A-208	ENST00000528851	CFAP65	Q6ZU64	1925 aa	Known RBP	11.42	□□□□□ -0.58
MS4A6A-208	ENST00000528851	SYNM	O15061	1565 aa		11.42	□□□□□ -0.58
MS4A6A-208	ENST00000528851	LTK	P29376	864 aa		11.42	□□□□□ -0.58
MS4A6A-208	ENST00000528851	SLIT1	O75093	1534 aa		11.4	□□□□□ -0.58
MS4A6A-208	ENST00000528851	ARHGAP23	Q9P227	1491 aa		11.4	□□□□□ -0.58
MS4A6A-208	ENST00000528851	MED14	O60244	1454 aa		11.4	□□□□□ -0.59
MS4A6A-208	ENST00000528851	RPGRIP1L	Q68CZ1	1315 aa		11.39	□□□□□ -0.59
MS4A6A-208	ENST00000528851	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.39	□□□□□ -0.59
MS4A6A-208	ENST00000528851	STRC	Q7RTU9	1775 aa		11.39	□□□□□ -0.59
MS4A6A-208	ENST00000528851	KDM5A	P29375	1690 aa	Known RBP	11.39	□□□□□ -0.59
MS4A6A-208	ENST00000528851	PIK3C2B	O00750	1634 aa		11.38	□□□□□ -0.59
MS4A6A-208	ENST00000528851	NPHP4	O75161	1426 aa	Predicted RBP	11.38	□□□□□ -0.59
MS4A6A-208	ENST00000528851	UBR1	Q8IWV7	1749 aa		11.38	□□□□□ -0.59
MS4A6A-208	ENST00000528851	ZNF326	Q5BKZ1	582 aa	Known RBP	11.37	□□□□□ -0.59
MS4A6A-208	ENST00000528851	FOXD4L1	Q9NU39	408 aa		11.37	□□□□□ -0.59
MS4A6A-208	ENST00000528851	ADGRB3	O60242	1522 aa		11.37	□□□□□ -0.59
MS4A6A-208	ENST00000528851	TRPM2	O94759	1503 aa		11.37	□□□□□ -0.59
MS4A6A-208	ENST00000528851	SCAF11	Q99590	1463 aa	Known RBP	11.37	□□□□□ -0.59
MS4A6A-208	ENST00000528851	PPP1R15A	O75807	674 aa	Predicted RBP	11.36	□□□□□ -0.59
MS4A6A-208	ENST00000528851	CCDC144A	A2RUR9	1427 aa		11.36	□□□□□ -0.59
MS4A6A-208	ENST00000528851	RIMS2	Q9UQ26	1411 aa		11.36	□□□□□ -0.59
MS4A6A-208	ENST00000528851	VGF	O15240	615 aa	Predicted RBP	11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	ANKRD30B	Q9BXX2	1392 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	TMEM131L	A2VDJ0	1609 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	EVX2	Q03828	476 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	BCAN	Q96GW7	911 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	TBX22	Q9Y458	520 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	ZFYVE9	O95405	1425 aa		11.35	□□□□□ -0.59
MS4A6A-208	ENST00000528851	SPHKAP	Q2M3C7	1700 aa		11.34	□□□□□ -0.59
MS4A6A-208	ENST00000528851	PLEKHG1	Q9ULL1	1385 aa		11.34	□□□□□ -0.59
MS4A6A-208	ENST00000528851	CERK	Q8TCT0	537 aa		11.33	□□□□□ -0.6
MS4A6A-208	ENST00000528851	NEURL4	Q96JN8	1562 aa		11.32	□□□□□ -0.6
MS4A6A-208	ENST00000528851	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.32	□□□□□ -0.6
MS4A6A-208	ENST00000528851	STAC3	Q96MF2	364 aa		11.32	□□□□□ -0.6
MS4A6A-208	ENST00000528851	SLC26A8	Q96RN1	970 aa		11.32	□□□□□ -0.6
MS4A6A-208	ENST00000528851	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.31	□□□□□ -0.6
MS4A6A-208	ENST00000528851	KCNA6	P17658	529 aa		11.31	□□□□□ -0.6
MS4A6A-208	ENST00000528851	RGL3	Q3MIN7	710 aa		11.31	□□□□□ -0.6
MS4A6A-208	ENST00000528851	SPDYE2B	A6NHP3	402 aa		11.3	□□□□□ -0.6
MS4A6A-208	ENST00000528851	SPDYE6	P0CI01	402 aa		11.3	□□□□□ -0.6
MS4A6A-208	ENST00000528851	SPDYE2	Q495Y8	402 aa		11.3	□□□□□ -0.6
MS4A6A-208	ENST00000528851	CLTCL1	P53675	1640 aa		11.3	□□□□□ -0.6
MS4A6A-208	ENST00000528851	SPATA31E1	Q6ZUB1	1445 aa		11.3	□□□□□ -0.6
MS4A6A-208	ENST00000528851	PCGF6	Q9BYE7	350 aa		11.29	□□□□□ -0.6
MS4A6A-208	ENST00000528851	POLR1A	O95602	1720 aa	Predicted RBP	11.29	□□□□□ -0.6
MS4A6A-208	ENST00000528851	IQGAP1	P46940	1657 aa		11.27	□□□□□ -0.6
MS4A6A-208	ENST00000528851	PIK3R4	Q99570	1358 aa		11.27	□□□□□ -0.6
MS4A6A-208	ENST00000528851	LTBP4	Q8N2S1	1624 aa		11.27	□□□□□ -0.61
MS4A6A-208	ENST00000528851	KIF1B	O60333	1816 aa		11.27	□□□□□ -0.61
MS4A6A-208	ENST00000528851	DHX57	Q6P158	1386 aa	Known RBP	11.26	□□□□□ -0.61
MS4A6A-208	ENST00000528851	ADAMTS13	Q76LX8	1427 aa		11.26	□□□□□ -0.61
MS4A6A-208	ENST00000528851	C19orf67	A6NJJ6	358 aa		11.25	□□□□□ -0.61
MS4A6A-208	ENST00000528851	CPS1	P31327	1500 aa		11.25	□□□□□ -0.61
MS4A6A-208	ENST00000528851	NEXMIF	Q5QGS0	1516 aa		11.25	□□□□□ -0.61
MS4A6A-208	ENST00000528851	IQSEC2	Q5JU85	1478 aa		11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	PRKAR2A	P13861	404 aa	Known RBP	11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	DCAF11	Q8TEB1	546 aa		11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	FBXO41	Q8TF61	875 aa		11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	AMOTL2	Q9Y2J4	779 aa		11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	ADGRF5	Q8IZF2	1346 aa		11.24	□□□□□ -0.61
MS4A6A-208	ENST00000528851	LHX8	Q68G74	356 aa		11.23	□□□□□ -0.61
MS4A6A-208	ENST00000528851	PROSER2	Q86WR7	435 aa	Predicted RBP	11.23	□□□□□ -0.61
MS4A6A-208	ENST00000528851	MYO5B	Q9ULV0	1848 aa		11.23	□□□□□ -0.61
MS4A6A-208	ENST00000528851	C14orf93	Q9H972	538 aa	Known RBP	11.23	□□□□□ -0.61
MS4A6A-208	ENST00000528851	SIN3A	Q96ST3	1273 aa		11.21	□□□□□ -0.61
MS4A6A-208	ENST00000528851	KDM2A	Q9Y2K7	1162 aa		11.21	□□□□□ -0.61
MS4A6A-208	ENST00000528851	DIP2A	Q14689	1571 aa		11.21	□□□□□ -0.61
MS4A6A-208	ENST00000528851	SETBP1	Q9Y6X0	1596 aa		11.21	□□□□□ -0.61
MS4A6A-208	ENST00000528851	TOM1	O60784	492 aa		11.21	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NCOA3	Q9Y6Q9	1424 aa		11.2	□□□□□ -0.62
MS4A6A-208	ENST00000528851	MET	P08581	1390 aa		11.2	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NEUROD1	Q13562	356 aa		11.2	□□□□□ -0.62
MS4A6A-208	ENST00000528851	LRRC7	Q96NW7	1537 aa		11.2	□□□□□ -0.62
MS4A6A-208	ENST00000528851	SIRT1	Q96EB6	747 aa		11.19	□□□□□ -0.62
MS4A6A-208	ENST00000528851	MYOM2	P54296	1465 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	TMEM94	Q12767	1356 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	NRXN1	Q9ULB1	1477 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	UBAP1L	F5GYI3	381 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	ATXN8OS	P0DMR3	200 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	CFAP70	Q5T0N1	1121 aa		11.18	□□□□□ -0.62
MS4A6A-208	ENST00000528851	L3MBTL2	Q969R5	705 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms