RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
CDC27-206ENST00000528748 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
CDC27-206ENST00000528748 RNF17Q9BXT8 1623 aaKnown RBP16.36■□□□□ 0.21
CDC27-206ENST00000528748 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
CDC27-206ENST00000528748 HRCP23327 699 aa16.34■□□□□ 0.21
CDC27-206ENST00000528748 KANK1Q14678 1352 aa16.34■□□□□ 0.21
CDC27-206ENST00000528748 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
CDC27-206ENST00000528748 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
CDC27-206ENST00000528748 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
CDC27-206ENST00000528748 NUP155O75694 1391 aa16.32■□□□□ 0.2
CDC27-206ENST00000528748 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
CDC27-206ENST00000528748 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
CDC27-206ENST00000528748 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
CDC27-206ENST00000528748 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
CDC27-206ENST00000528748 ACIN1Q9UKV3 1341 aaKnown RBP16.32■□□□□ 0.2
CDC27-206ENST00000528748 FER1L4A9Z1Z3 1794 aa16.31■□□□□ 0.2
CDC27-206ENST00000528748 ZMYM3Q14202 1370 aa16.31■□□□□ 0.2
CDC27-206ENST00000528748 PYGBP11216 843 aa16.31■□□□□ 0.2
CDC27-206ENST00000528748 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
CDC27-206ENST00000528748 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
CDC27-206ENST00000528748 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
CDC27-206ENST00000528748 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
CDC27-206ENST00000528748 UNC13BO14795 1591 aa16.3■□□□□ 0.2
CDC27-206ENST00000528748 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
CDC27-206ENST00000528748 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
CDC27-206ENST00000528748 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
CDC27-206ENST00000528748 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
CDC27-206ENST00000528748 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
CDC27-206ENST00000528748 ABCC3O15438 1527 aa16.28■□□□□ 0.2
CDC27-206ENST00000528748 PTPRMP28827 1452 aa16.28■□□□□ 0.2
CDC27-206ENST00000528748 LMTK2Q8IWU2 1503 aa16.26■□□□□ 0.19
CDC27-206ENST00000528748 MROH2AA6NES4 1674 aa16.26■□□□□ 0.19
CDC27-206ENST00000528748 CEP152O94986 1710 aa16.25■□□□□ 0.19
CDC27-206ENST00000528748 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
CDC27-206ENST00000528748 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
CDC27-206ENST00000528748 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
CDC27-206ENST00000528748 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
CDC27-206ENST00000528748 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
CDC27-206ENST00000528748 ASTLQ6HA08 431 aaPredicted RBP16.23■□□□□ 0.19
CDC27-206ENST00000528748 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
CDC27-206ENST00000528748 C3P01024 1663 aa16.22■□□□□ 0.19
CDC27-206ENST00000528748 CHRM1P11229 460 aaPredicted RBP16.22■□□□□ 0.19
CDC27-206ENST00000528748 TIE1P35590 1138 aa16.22■□□□□ 0.19
CDC27-206ENST00000528748 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
CDC27-206ENST00000528748 PZPP20742 1482 aa16.22■□□□□ 0.19
CDC27-206ENST00000528748 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
CDC27-206ENST00000528748 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
CDC27-206ENST00000528748 TET3O43151 1660 aa16.21■□□□□ 0.18
CDC27-206ENST00000528748 NPATQ14207 1427 aa16.2■□□□□ 0.18
CDC27-206ENST00000528748 PKD2Q13563 968 aa16.2■□□□□ 0.18
CDC27-206ENST00000528748 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
CDC27-206ENST00000528748 TRPC6Q9Y210 931 aa16.18■□□□□ 0.18
CDC27-206ENST00000528748 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
CDC27-206ENST00000528748 RPRD2Q5VT52 1461 aaKnown RBP16.17■□□□□ 0.18
CDC27-206ENST00000528748 E9PCH4 1651 aa16.16■□□□□ 0.18
CDC27-206ENST00000528748 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
CDC27-206ENST00000528748 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
CDC27-206ENST00000528748 TNRQ92752 1358 aa16.14■□□□□ 0.17
CDC27-206ENST00000528748 NOS1P29475 1434 aa16.14■□□□□ 0.17
CDC27-206ENST00000528748 ERVK-7P63135 1459 aa16.14■□□□□ 0.17
CDC27-206ENST00000528748 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
CDC27-206ENST00000528748 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
CDC27-206ENST00000528748 PTPRTO14522 1441 aa16.11■□□□□ 0.17
CDC27-206ENST00000528748 ATN1P54259 1190 aaPredicted RBP16.11■□□□□ 0.17
CDC27-206ENST00000528748 IDI1Q13907 227 aa16.11■□□□□ 0.17
CDC27-206ENST00000528748 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
CDC27-206ENST00000528748 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
CDC27-206ENST00000528748 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
CDC27-206ENST00000528748 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
CDC27-206ENST00000528748 SLC39A7Q92504 469 aa16.09■□□□□ 0.17
CDC27-206ENST00000528748 PLA2R1Q13018 1463 aa16.09■□□□□ 0.17
CDC27-206ENST00000528748 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
CDC27-206ENST00000528748 UHRF1BP1Q6BDS2 1440 aa16.07■□□□□ 0.16
CDC27-206ENST00000528748 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
CDC27-206ENST00000528748 SYNMO15061 1565 aa16.07■□□□□ 0.16
CDC27-206ENST00000528748 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
CDC27-206ENST00000528748 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
CDC27-206ENST00000528748 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
CDC27-206ENST00000528748 C7P10643 843 aa16.05■□□□□ 0.16
CDC27-206ENST00000528748 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
CDC27-206ENST00000528748 THEMISQ8N1K5 641 aaPredicted RBP16.03■□□□□ 0.16
CDC27-206ENST00000528748 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
CDC27-206ENST00000528748 TRPM2O94759 1503 aa16.03■□□□□ 0.16
CDC27-206ENST00000528748 LHX8Q68G74 356 aa16.02■□□□□ 0.16
CDC27-206ENST00000528748 METRNQ9UJH8 293 aa16.02■□□□□ 0.16
CDC27-206ENST00000528748 PIK3C2BO00750 1634 aa16.01■□□□□ 0.15
CDC27-206ENST00000528748 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
CDC27-206ENST00000528748 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
CDC27-206ENST00000528748 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
CDC27-206ENST00000528748 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
CDC27-206ENST00000528748 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
CDC27-206ENST00000528748 HSPA2P54652 639 aa16■□□□□ 0.15
CDC27-206ENST00000528748 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
CDC27-206ENST00000528748 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
CDC27-206ENST00000528748 CLTCL1P53675 1640 aa15.98■□□□□ 0.15
CDC27-206ENST00000528748 UBR1Q8IWV7 1749 aa15.97■□□□□ 0.15
CDC27-206ENST00000528748 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.15
CDC27-206ENST00000528748 PDAP1Q13442 181 aaKnown RBP15.96■□□□□ 0.15
CDC27-206ENST00000528748 TMEM131LA2VDJ0 1609 aa15.96■□□□□ 0.15
CDC27-206ENST00000528748 KIF1BO60333 1816 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms