RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
PSMC3-204ENST00000527906 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
PSMC3-204ENST00000527906 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
PSMC3-204ENST00000527906 LRP6O75581 1613 aa16.13■□□□□ 0.17
PSMC3-204ENST00000527906 KCNA6P17658 529 aa16.13■□□□□ 0.17
PSMC3-204ENST00000527906 PROSER2Q86WR7 435 aaPredicted RBP16.13■□□□□ 0.17
PSMC3-204ENST00000527906 KANK1Q14678 1352 aa16.13■□□□□ 0.17
PSMC3-204ENST00000527906 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
PSMC3-204ENST00000527906 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
PSMC3-204ENST00000527906 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
PSMC3-204ENST00000527906 RXRBP28702 533 aa16.1■□□□□ 0.17
PSMC3-204ENST00000527906 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
PSMC3-204ENST00000527906 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
PSMC3-204ENST00000527906 NUP155O75694 1391 aa16.1■□□□□ 0.17
PSMC3-204ENST00000527906 TET3O43151 1660 aa16.09■□□□□ 0.17
PSMC3-204ENST00000527906 MSH6P52701 1360 aa16.09■□□□□ 0.17
PSMC3-204ENST00000527906 TMEM2Q9UHN6 1383 aa16.09■□□□□ 0.17
PSMC3-204ENST00000527906 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.16
PSMC3-204ENST00000527906 CDK12Q9NYV4 1490 aaPredicted RBP16.07■□□□□ 0.16
PSMC3-204ENST00000527906 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
PSMC3-204ENST00000527906 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
PSMC3-204ENST00000527906 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
PSMC3-204ENST00000527906 RPRD2Q5VT52 1461 aaKnown RBP16.04■□□□□ 0.16
PSMC3-204ENST00000527906 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
PSMC3-204ENST00000527906 CEP152O94986 1710 aa16.04■□□□□ 0.16
PSMC3-204ENST00000527906 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
PSMC3-204ENST00000527906 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
PSMC3-204ENST00000527906 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
PSMC3-204ENST00000527906 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
PSMC3-204ENST00000527906 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
PSMC3-204ENST00000527906 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
PSMC3-204ENST00000527906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.169e-7■■■■□ 21.5
PSMC3-204ENST00000527906 PIK3C2BO00750 1634 aa16.01■□□□□ 0.15
PSMC3-204ENST00000527906 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
PSMC3-204ENST00000527906 E9PCH4 1651 aa16■□□□□ 0.15
PSMC3-204ENST00000527906 RGS12O14924 1447 aa15.98■□□□□ 0.15
PSMC3-204ENST00000527906 AFF2P51816 1311 aa15.97■□□□□ 0.15
PSMC3-204ENST00000527906 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
PSMC3-204ENST00000527906 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
PSMC3-204ENST00000527906 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
PSMC3-204ENST00000527906 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
PSMC3-204ENST00000527906 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
PSMC3-204ENST00000527906 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
PSMC3-204ENST00000527906 IDI1Q13907 227 aa15.95■□□□□ 0.14
PSMC3-204ENST00000527906 BCANQ96GW7 911 aa15.95■□□□□ 0.14
PSMC3-204ENST00000527906 TRPM2O94759 1503 aa15.94■□□□□ 0.14
PSMC3-204ENST00000527906 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
PSMC3-204ENST00000527906 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
PSMC3-204ENST00000527906 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
PSMC3-204ENST00000527906 NOS1P29475 1434 aa15.93■□□□□ 0.14
PSMC3-204ENST00000527906 RBM6P78332 1123 aaKnown RBP15.92■□□□□ 0.14
PSMC3-204ENST00000527906 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
PSMC3-204ENST00000527906 NCOA3Q9Y6Q9 1424 aa15.92■□□□□ 0.14
PSMC3-204ENST00000527906 C14orf37Q86TY3 774 aa15.91■□□□□ 0.14
PSMC3-204ENST00000527906 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
PSMC3-204ENST00000527906 QTRT2Q9H974 415 aaKnown RBP15.91■□□□□ 0.14
PSMC3-204ENST00000527906 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
PSMC3-204ENST00000527906 FOXD1Q16676 465 aa15.9■□□□□ 0.14
PSMC3-204ENST00000527906 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
PSMC3-204ENST00000527906 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
PSMC3-204ENST00000527906 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
PSMC3-204ENST00000527906 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
PSMC3-204ENST00000527906 ATF3P18847 181 aa15.88■□□□□ 0.13
PSMC3-204ENST00000527906 BRINP3Q76B58 766 aa15.87■□□□□ 0.13
PSMC3-204ENST00000527906 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
PSMC3-204ENST00000527906 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
PSMC3-204ENST00000527906 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
PSMC3-204ENST00000527906 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
PSMC3-204ENST00000527906 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
PSMC3-204ENST00000527906 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
PSMC3-204ENST00000527906 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
PSMC3-204ENST00000527906 NGLY1Q96IV0 654 aa15.83■□□□□ 0.12
PSMC3-204ENST00000527906 SLC52A1Q9NWF4 448 aa15.83■□□□□ 0.12
PSMC3-204ENST00000527906 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
PSMC3-204ENST00000527906 ZFYVE9O95405 1425 aa15.83■□□□□ 0.12
PSMC3-204ENST00000527906 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
PSMC3-204ENST00000527906 ASXL1Q8IXJ9 1541 aa15.8■□□□□ 0.12
PSMC3-204ENST00000527906 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
PSMC3-204ENST00000527906 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
PSMC3-204ENST00000527906 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
PSMC3-204ENST00000527906 KIF1BO60333 1816 aa15.8■□□□□ 0.12
PSMC3-204ENST00000527906 SPATA31E1Q6ZUB1 1445 aa15.78■□□□□ 0.12
PSMC3-204ENST00000527906 PNPLA6Q8IY17 1366 aa15.78■□□□□ 0.12
PSMC3-204ENST00000527906 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
PSMC3-204ENST00000527906 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.12
PSMC3-204ENST00000527906 TMEM131LA2VDJ0 1609 aa15.76■□□□□ 0.11
PSMC3-204ENST00000527906 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
PSMC3-204ENST00000527906 DCCP43146 1447 aa15.76■□□□□ 0.11
PSMC3-204ENST00000527906 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
PSMC3-204ENST00000527906 CCDC125Q86Z20 511 aa15.75■□□□□ 0.11
PSMC3-204ENST00000527906 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
PSMC3-204ENST00000527906 EP400Q96L91 3159 aa15.74■□□□□ 0.11
PSMC3-204ENST00000527906 SIN3AQ96ST3 1273 aa15.74■□□□□ 0.11
PSMC3-204ENST00000527906 USP21Q9UK80 565 aa15.74■□□□□ 0.11
PSMC3-204ENST00000527906 TRPC5Q9UL62 973 aaPredicted RBP15.74■□□□□ 0.11
PSMC3-204ENST00000527906 MST1RQ04912 1400 aa15.74■□□□□ 0.11
PSMC3-204ENST00000527906 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
PSMC3-204ENST00000527906 AMOTL2Q9Y2J4 779 aa15.73■□□□□ 0.11
PSMC3-204ENST00000527906 ZEB1P37275 1124 aaPredicted RBP15.72■□□□□ 0.11
PSMC3-204ENST00000527906 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms