RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 ZNF518AQ6AHZ1 1483 aa12.05□□□□□ -0.48
NECTIN1-204ENST00000524429 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
NECTIN1-204ENST00000524429 HFM1A2PYH4 1435 aa12.04□□□□□ -0.48
NECTIN1-204ENST00000524429 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
NECTIN1-204ENST00000524429 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
NECTIN1-204ENST00000524429 ZMYM4Q5VZL5 1548 aa12.03□□□□□ -0.48
NECTIN1-204ENST00000524429 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
NECTIN1-204ENST00000524429 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
NECTIN1-204ENST00000524429 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
NECTIN1-204ENST00000524429 FRMPD1Q5SYB0 1578 aa12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 ST18O60284 1047 aa12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 IFNL1Q8IU54 200 aa12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
NECTIN1-204ENST00000524429 HSPA2P54652 639 aa12.01□□□□□ -0.49
NECTIN1-204ENST00000524429 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
NECTIN1-204ENST00000524429 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
NECTIN1-204ENST00000524429 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
NECTIN1-204ENST00000524429 NCOA1Q15788 1441 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 SCAPERQ9BY12 1400 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 MADDQ8WXG6 1647 aa12□□□□□ -0.49
NECTIN1-204ENST00000524429 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 NAIPQ13075 1403 aa11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
NECTIN1-204ENST00000524429 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
NECTIN1-204ENST00000524429 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
NECTIN1-204ENST00000524429 SETD5Q9C0A6 1442 aa11.97□□□□□ -0.49
NECTIN1-204ENST00000524429 PLCG2P16885 1265 aa11.97□□□□□ -0.49
NECTIN1-204ENST00000524429 DUOX2Q9NRD8 1548 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 RAPGEF3O95398 923 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 HRCP23327 699 aa11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.49
NECTIN1-204ENST00000524429 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
NECTIN1-204ENST00000524429 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
NECTIN1-204ENST00000524429 REREQ9P2R6 1566 aa11.95□□□□□ -0.5
NECTIN1-204ENST00000524429 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
NECTIN1-204ENST00000524429 UNC13BO14795 1591 aa11.94□□□□□ -0.5
NECTIN1-204ENST00000524429 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
NECTIN1-204ENST00000524429 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
NECTIN1-204ENST00000524429 ITGAEP38570 1179 aa11.93□□□□□ -0.5
NECTIN1-204ENST00000524429 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
NECTIN1-204ENST00000524429 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
NECTIN1-204ENST00000524429 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
NECTIN1-204ENST00000524429 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
NECTIN1-204ENST00000524429 ARHGEF40Q8TER5 1519 aa11.92□□□□□ -0.5
NECTIN1-204ENST00000524429 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
NECTIN1-204ENST00000524429 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
NECTIN1-204ENST00000524429 NBR1Q14596 966 aa11.91□□□□□ -0.5
NECTIN1-204ENST00000524429 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
NECTIN1-204ENST00000524429 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
NECTIN1-204ENST00000524429 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
NECTIN1-204ENST00000524429 AFAP1Q8N556 730 aa11.9□□□□□ -0.5
NECTIN1-204ENST00000524429 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
NECTIN1-204ENST00000524429 IQGAP3Q86VI3 1631 aa11.89□□□□□ -0.51
NECTIN1-204ENST00000524429 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
NECTIN1-204ENST00000524429 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
NECTIN1-204ENST00000524429 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
NECTIN1-204ENST00000524429 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
NECTIN1-204ENST00000524429 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
NECTIN1-204ENST00000524429 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
NECTIN1-204ENST00000524429 RRP7BPQ9NSQ0 103 aa11.86□□□□□ -0.51
NECTIN1-204ENST00000524429 A2MP01023 1474 aa11.86□□□□□ -0.51
NECTIN1-204ENST00000524429 AGLP35573 1532 aa11.86□□□□□ -0.51
NECTIN1-204ENST00000524429 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
NECTIN1-204ENST00000524429 DHX29Q7Z478 1369 aaKnown RBP11.85□□□□□ -0.51
NECTIN1-204ENST00000524429 PYGBP11216 843 aa11.85□□□□□ -0.51
NECTIN1-204ENST00000524429 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
NECTIN1-204ENST00000524429 ATP10AO60312 1499 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 TET3O43151 1660 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 YEATS2Q9ULM3 1422 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
NECTIN1-204ENST00000524429 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
NECTIN1-204ENST00000524429 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
NECTIN1-204ENST00000524429 MLECQ14165 292 aa11.81□□□□□ -0.52
NECTIN1-204ENST00000524429 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
NECTIN1-204ENST00000524429 PZPP20742 1482 aa11.81□□□□□ -0.52
NECTIN1-204ENST00000524429 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
NECTIN1-204ENST00000524429 CEP152O94986 1710 aa11.8□□□□□ -0.52
NECTIN1-204ENST00000524429 SNPHO15079 494 aa11.8□□□□□ -0.52
NECTIN1-204ENST00000524429 ARXQ96QS3 562 aa11.8□□□□□ -0.52
NECTIN1-204ENST00000524429 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
NECTIN1-204ENST00000524429 RGL2O15211 777 aa11.79□□□□□ -0.52
NECTIN1-204ENST00000524429 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
NECTIN1-204ENST00000524429 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
NECTIN1-204ENST00000524429 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
NECTIN1-204ENST00000524429 E9PCH4 1651 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms