RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
POLB-215ENST00000524208 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
POLB-215ENST00000524208 PSEN1P49768 467 aa12.31□□□□□ -0.44
POLB-215ENST00000524208 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
POLB-215ENST00000524208 PLEKHH2Q8IVE3 1493 aa12.31□□□□□ -0.44
POLB-215ENST00000524208 AGLP35573 1532 aa12.31□□□□□ -0.44
POLB-215ENST00000524208 TIE1P35590 1138 aa12.3□□□□□ -0.44
POLB-215ENST00000524208 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
POLB-215ENST00000524208 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
POLB-215ENST00000524208 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
POLB-215ENST00000524208 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
POLB-215ENST00000524208 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
POLB-215ENST00000524208 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
POLB-215ENST00000524208 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
POLB-215ENST00000524208 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
POLB-215ENST00000524208 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
POLB-215ENST00000524208 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
POLB-215ENST00000524208 SEC24BO95487 1268 aa12.26□□□□□ -0.45
POLB-215ENST00000524208 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
POLB-215ENST00000524208 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
POLB-215ENST00000524208 MLECQ14165 292 aa12.25□□□□□ -0.45
POLB-215ENST00000524208 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
POLB-215ENST00000524208 A2MP01023 1474 aa12.23□□□□□ -0.45
POLB-215ENST00000524208 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
POLB-215ENST00000524208 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
POLB-215ENST00000524208 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
POLB-215ENST00000524208 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
POLB-215ENST00000524208 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
POLB-215ENST00000524208 C3P01024 1663 aa12.22□□□□□ -0.45
POLB-215ENST00000524208 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
POLB-215ENST00000524208 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
POLB-215ENST00000524208 RTEL1-TNFRSF6BF6WH68 1400 aa12.2□□□□□ -0.46
POLB-215ENST00000524208 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
POLB-215ENST00000524208 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
POLB-215ENST00000524208 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
POLB-215ENST00000524208 PREX1Q8TCU6 1659 aa12.18□□□□□ -0.46
POLB-215ENST00000524208 PTPN23Q9H3S7 1636 aa12.18□□□□□ -0.46
POLB-215ENST00000524208 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
POLB-215ENST00000524208 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
POLB-215ENST00000524208 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
POLB-215ENST00000524208 CLTCQ00610 1675 aaKnown RBP12.16□□□□□ -0.46
POLB-215ENST00000524208 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
POLB-215ENST00000524208 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
POLB-215ENST00000524208 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
POLB-215ENST00000524208 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
POLB-215ENST00000524208 SHANK2Q9UPX8 1470 aa12.15□□□□□ -0.46
POLB-215ENST00000524208 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
POLB-215ENST00000524208 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
POLB-215ENST00000524208 ABCC5O15440 1437 aa12.14□□□□□ -0.47
POLB-215ENST00000524208 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
POLB-215ENST00000524208 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
POLB-215ENST00000524208 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
POLB-215ENST00000524208 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
POLB-215ENST00000524208 HSPA2P54652 639 aa12.13□□□□□ -0.47
POLB-215ENST00000524208 IER5LQ5T953 404 aa12.13□□□□□ -0.47
POLB-215ENST00000524208 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
POLB-215ENST00000524208 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
POLB-215ENST00000524208 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 DAPK1P53355 1430 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 NPATQ14207 1427 aa12.11□□□□□ -0.47
POLB-215ENST00000524208 SOX12O15370 315 aa12.1□□□□□ -0.47
POLB-215ENST00000524208 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
POLB-215ENST00000524208 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
POLB-215ENST00000524208 ABCC3O15438 1527 aa12.1□□□□□ -0.47
POLB-215ENST00000524208 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
POLB-215ENST00000524208 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
POLB-215ENST00000524208 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
POLB-215ENST00000524208 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
POLB-215ENST00000524208 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
POLB-215ENST00000524208 NLRP6P59044 892 aa12.08□□□□□ -0.48
POLB-215ENST00000524208 DUOX2Q9NRD8 1548 aa12.07□□□□□ -0.48
POLB-215ENST00000524208 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
POLB-215ENST00000524208 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
POLB-215ENST00000524208 PZPP20742 1482 aa12.07□□□□□ -0.48
POLB-215ENST00000524208 KIF15Q9NS87 1388 aa12.06□□□□□ -0.48
POLB-215ENST00000524208 CEP170BQ9Y4F5 1589 aaPredicted RBP12.06□□□□□ -0.48
POLB-215ENST00000524208 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
POLB-215ENST00000524208 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
POLB-215ENST00000524208 GGT6Q6P531 493 aa12.05□□□□□ -0.48
POLB-215ENST00000524208 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
POLB-215ENST00000524208 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
POLB-215ENST00000524208 CEP152O94986 1710 aa12.04□□□□□ -0.48
POLB-215ENST00000524208 KIF3BO15066 747 aa12.04□□□□□ -0.48
POLB-215ENST00000524208 PLCG2P16885 1265 aa12.04□□□□□ -0.48
POLB-215ENST00000524208 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
POLB-215ENST00000524208 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
POLB-215ENST00000524208 ERBINQ96RT1 1412 aa12.03□□□□□ -0.48
POLB-215ENST00000524208 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
POLB-215ENST00000524208 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
POLB-215ENST00000524208 CAMSAP1Q5T5Y3 1602 aa12.03□□□□□ -0.48
POLB-215ENST00000524208 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
POLB-215ENST00000524208 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
POLB-215ENST00000524208 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
POLB-215ENST00000524208 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
POLB-215ENST00000524208 TSPY4P0CV99 314 aa12□□□□□ -0.49
POLB-215ENST00000524208 TSPY10P0CW01 314 aa12□□□□□ -0.49
POLB-215ENST00000524208 A2ML1A8K2U0 1454 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms