RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
SHPRH-210ENST00000523276 POGZQ7Z3K3 1410 aa9.12□□□□□ -0.95
SHPRH-210ENST00000523276 RNF17Q9BXT8 1623 aaKnown RBP9.11□□□□□ -0.95
SHPRH-210ENST00000523276 SPHKAPQ2M3C7 1700 aa9.11□□□□□ -0.95
SHPRH-210ENST00000523276 COL17A1Q9UMD9 1497 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-210ENST00000523276 FAM9BQ8IZU0 186 aa9.11□□□□□ -0.95
SHPRH-210ENST00000523276 CLTCL1P53675 1640 aa9.11□□□□□ -0.95
SHPRH-210ENST00000523276 KIDINS220Q9ULH0 1771 aa9.11□□□□□ -0.95
SHPRH-210ENST00000523276 MADDQ8WXG6 1647 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 NEFLP07196 543 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 NEURL4Q96JN8 1562 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
SHPRH-210ENST00000523276 TESK2Q96S53 571 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 LMTK2Q8IWU2 1503 aa9.1□□□□□ -0.95
SHPRH-210ENST00000523276 MLH3Q9UHC1 1453 aa9.09□□□□□ -0.95
SHPRH-210ENST00000523276 ZBED9Q6R2W3 1325 aa9.09□□□□□ -0.95
SHPRH-210ENST00000523276 CEP152O94986 1710 aa9.09□□□□□ -0.95
SHPRH-210ENST00000523276 EFCAB6Q5THR3 1501 aa9.09□□□□□ -0.95
SHPRH-210ENST00000523276 DISP3Q9P2K9 1392 aa9.08□□□□□ -0.96
SHPRH-210ENST00000523276 NEO1Q92859 1461 aa9.08□□□□□ -0.96
SHPRH-210ENST00000523276 RALBP1Q15311 655 aa9.07□□□□□ -0.96
SHPRH-210ENST00000523276 FRMPD1Q5SYB0 1578 aa9.07□□□□□ -0.96
SHPRH-210ENST00000523276 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
SHPRH-210ENST00000523276 PPRC1Q5VV67 1664 aaKnown RBP9.06□□□□□ -0.96
SHPRH-210ENST00000523276 TMF1P82094 1093 aa9.06□□□□□ -0.96
SHPRH-210ENST00000523276 CNGB1Q14028 1251 aaPredicted RBP9.06□□□□□ -0.96
SHPRH-210ENST00000523276 MYBBP1AQ9BQG0 1328 aaKnown RBP9.06□□□□□ -0.96
SHPRH-210ENST00000523276 BRD4O60885 1362 aaPredicted RBP9.06□□□□□ -0.96
SHPRH-210ENST00000523276 RBM42Q9BTD8 480 aaKnown RBP9.05□□□□□ -0.96
SHPRH-210ENST00000523276 MYOM2P54296 1465 aa9.05□□□□□ -0.96
SHPRH-210ENST00000523276 SCAF11Q99590 1463 aaKnown RBP9.05□□□□□ -0.96
SHPRH-210ENST00000523276 PARD3Q8TEW0 1356 aa9.05□□□□□ -0.96
SHPRH-210ENST00000523276 IQGAP1P46940 1657 aa9.05□□□□□ -0.96
SHPRH-210ENST00000523276 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
SHPRH-210ENST00000523276 PNISRQ8TF01 805 aaKnown RBP9.05□□□□□ -0.96
SHPRH-210ENST00000523276 UGGT1Q9NYU2 1555 aa9.05□□□□□ -0.96
SHPRH-210ENST00000523276 TMC1Q8TDI8 760 aa9.04□□□□□ -0.96
SHPRH-210ENST00000523276 ABCA6Q8N139 1617 aa9.04□□□□□ -0.96
SHPRH-210ENST00000523276 WASHC2CQ9Y4E1 1318 aa9.04□□□□□ -0.96
SHPRH-210ENST00000523276 LRPPRCP42704 1394 aaKnown RBP9.03□□□□□ -0.96
SHPRH-210ENST00000523276 ARXQ96QS3 562 aa9.03□□□□□ -0.96
SHPRH-210ENST00000523276 KIAA1210Q9ULL0 1709 aa9.03□□□□□ -0.96
SHPRH-210ENST00000523276 NPATQ14207 1427 aa9.02□□□□□ -0.96
SHPRH-210ENST00000523276 ADGRB3O60242 1522 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 EIF3AQ14152 1382 aaKnown RBP9.02□□□□□ -0.97
SHPRH-210ENST00000523276 NRXN1Q9ULB1 1477 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 ABCC3O15438 1527 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 NLRP13Q86W25 1043 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 PANK3Q9H999 370 aa9.02□□□□□ -0.97
SHPRH-210ENST00000523276 RAPGEF3O95398 923 aa9.01□□□□□ -0.97
SHPRH-210ENST00000523276 SMG6Q86US8 1419 aaKnown RBP9.01□□□□□ -0.97
SHPRH-210ENST00000523276 GLI2P10070 1586 aa9.01□□□□□ -0.97
SHPRH-210ENST00000523276 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
SHPRH-210ENST00000523276 CDCA8Q53HL2 280 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 GGT6Q6P531 493 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
SHPRH-210ENST00000523276 FBXO3Q9UK99 471 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 ADGRF5Q8IZF2 1346 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 MROH2AA6NES4 1674 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 ERICH6BQ5W0A0 696 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 PAXIP1Q6ZW49 1069 aaPredicted RBP9□□□□□ -0.97
SHPRH-210ENST00000523276 IFT172Q9UG01 1749 aa9□□□□□ -0.97
SHPRH-210ENST00000523276 KIF1BO60333 1816 aa8.99□□□□□ -0.97
SHPRH-210ENST00000523276 CFAP70Q5T0N1 1121 aa8.99□□□□□ -0.97
SHPRH-210ENST00000523276 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
SHPRH-210ENST00000523276 SYNMO15061 1565 aa8.99□□□□□ -0.97
SHPRH-210ENST00000523276 NOS1P29475 1434 aa8.99□□□□□ -0.97
SHPRH-210ENST00000523276 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
SHPRH-210ENST00000523276 RICTORQ6R327 1708 aa8.98□□□□□ -0.97
SHPRH-210ENST00000523276 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
SHPRH-210ENST00000523276 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
SHPRH-210ENST00000523276 NUDCQ9Y266 331 aa8.98□□□□□ -0.97
SHPRH-210ENST00000523276 IRX6P78412 446 aaPredicted RBP8.97□□□□□ -0.97
SHPRH-210ENST00000523276 CC2D1BQ5T0F9 858 aaKnown RBP8.97□□□□□ -0.97
SHPRH-210ENST00000523276 CAMSAP1Q5T5Y3 1602 aa8.97□□□□□ -0.97
SHPRH-210ENST00000523276 ARHGAP31Q2M1Z3 1444 aa8.97□□□□□ -0.97
SHPRH-210ENST00000523276 INSRP06213 1382 aa8.97□□□□□ -0.97
SHPRH-210ENST00000523276 RPGRIP1LQ68CZ1 1315 aa8.97□□□□□ -0.97
SHPRH-210ENST00000523276 SETBP1Q9Y6X0 1596 aa8.97□□□□□ -0.97
SHPRH-210ENST00000523276 PIK3C2GO75747 1445 aa8.96□□□□□ -0.97
SHPRH-210ENST00000523276 YEATS2Q9ULM3 1422 aa8.96□□□□□ -0.97
SHPRH-210ENST00000523276 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.97
SHPRH-210ENST00000523276 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.97
SHPRH-210ENST00000523276 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.97
SHPRH-210ENST00000523276 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.98
SHPRH-210ENST00000523276 ZMYM4Q5VZL5 1548 aa8.96□□□□□ -0.98
SHPRH-210ENST00000523276 SBNO2Q9Y2G9 1366 aa8.96□□□□□ -0.98
SHPRH-210ENST00000523276 ERVK-7P63135 1459 aa8.95□□□□□ -0.98
SHPRH-210ENST00000523276 ZC3H13Q5T200 1668 aaKnown RBP8.95□□□□□ -0.98
SHPRH-210ENST00000523276 KNSTRNQ9Y448 316 aa8.95□□□□□ -0.98
SHPRH-210ENST00000523276 PIK3C2BO00750 1634 aa8.95□□□□□ -0.98
SHPRH-210ENST00000523276 MYO3AQ8NEV4 1616 aa8.95□□□□□ -0.98
SHPRH-210ENST00000523276 C14orf93Q9H972 538 aaKnown RBP8.94□□□□□ -0.98
SHPRH-210ENST00000523276 PPP4R2Q9NY27 417 aa8.94□□□□□ -0.98
SHPRH-210ENST00000523276 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
SHPRH-210ENST00000523276 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
SHPRH-210ENST00000523276 ASXL1Q8IXJ9 1541 aa8.94□□□□□ -0.98
SHPRH-210ENST00000523276 KDM5AP29375 1690 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms