RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 RXRBP28702 533 aa14.61□□□□□ -0.07
TRAPPC9-212ENST00000521944 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-212ENST00000521944 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
TRAPPC9-212ENST00000521944 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
TRAPPC9-212ENST00000521944 SLC26A8Q96RN1 970 aa14.59□□□□□ -0.07
TRAPPC9-212ENST00000521944 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-212ENST00000521944 SPATA31A6Q5VVP1 1343 aa14.59□□□□□ -0.07
TRAPPC9-212ENST00000521944 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
TRAPPC9-212ENST00000521944 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
TRAPPC9-212ENST00000521944 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC9-212ENST00000521944 TET3O43151 1660 aa14.58□□□□□ -0.08
TRAPPC9-212ENST00000521944 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-212ENST00000521944 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
TRAPPC9-212ENST00000521944 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
TRAPPC9-212ENST00000521944 MROH1Q8NDA8 1641 aa14.56□□□□□ -0.08
TRAPPC9-212ENST00000521944 MEX3CQ5U5Q3 659 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-212ENST00000521944 FGD6Q6ZV73 1430 aa14.55□□□□□ -0.08
TRAPPC9-212ENST00000521944 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
TRAPPC9-212ENST00000521944 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
TRAPPC9-212ENST00000521944 MSH6P52701 1360 aa14.53□□□□□ -0.08
TRAPPC9-212ENST00000521944 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
TRAPPC9-212ENST00000521944 SSUH2Q9Y2M2 353 aa14.52□□□□□ -0.09
TRAPPC9-212ENST00000521944 NWD1Q149M9 1564 aa14.51□□□□□ -0.09
TRAPPC9-212ENST00000521944 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-212ENST00000521944 RGS12O14924 1447 aa14.51□□□□□ -0.09
TRAPPC9-212ENST00000521944 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
TRAPPC9-212ENST00000521944 PIK3C2BO00750 1634 aa14.51□□□□□ -0.09
TRAPPC9-212ENST00000521944 CEP152O94986 1710 aa14.5□□□□□ -0.09
TRAPPC9-212ENST00000521944 AFF2P51816 1311 aa14.5□□□□□ -0.09
TRAPPC9-212ENST00000521944 SETBP1Q9Y6X0 1596 aa14.5□□□□□ -0.09
TRAPPC9-212ENST00000521944 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
TRAPPC9-212ENST00000521944 EP400Q96L91 3159 aa14.49□□□□□ -0.09
TRAPPC9-212ENST00000521944 IDI1Q13907 227 aa14.49□□□□□ -0.09
TRAPPC9-212ENST00000521944 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
TRAPPC9-212ENST00000521944 NUTM2BA6NNL0 878 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-212ENST00000521944 NUTM2EB1AL46 878 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-212ENST00000521944 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
TRAPPC9-212ENST00000521944 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
TRAPPC9-212ENST00000521944 NUTM2AQ8IVF1 878 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-212ENST00000521944 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
TRAPPC9-212ENST00000521944 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-212ENST00000521944 DIP2AQ14689 1571 aa14.47□□□□□ -0.09
TRAPPC9-212ENST00000521944 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.09
TRAPPC9-212ENST00000521944 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.1
TRAPPC9-212ENST00000521944 RBM6P78332 1123 aaKnown RBP14.45□□□□□ -0.1
TRAPPC9-212ENST00000521944 EFCAB6Q5THR3 1501 aa14.45□□□□□ -0.1
TRAPPC9-212ENST00000521944 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
TRAPPC9-212ENST00000521944 EIF2AK4Q9P2K8 1649 aaKnown RBP14.44□□□□□ -0.1
TRAPPC9-212ENST00000521944 NUTM2DQ5VT03 806 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC9-212ENST00000521944 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
TRAPPC9-212ENST00000521944 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
TRAPPC9-212ENST00000521944 MAST1Q9Y2H9 1570 aa14.43□□□□□ -0.1
TRAPPC9-212ENST00000521944 BRINP3Q76B58 766 aa14.42□□□□□ -0.1
TRAPPC9-212ENST00000521944 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
TRAPPC9-212ENST00000521944 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
TRAPPC9-212ENST00000521944 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC9-212ENST00000521944 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
TRAPPC9-212ENST00000521944 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
TRAPPC9-212ENST00000521944 C19orf44Q9H6X5 657 aa14.39□□□□□ -0.11
TRAPPC9-212ENST00000521944 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC9-212ENST00000521944 FKBP8Q14318 412 aa14.38□□□□□ -0.11
TRAPPC9-212ENST00000521944 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
TRAPPC9-212ENST00000521944 ATAD2Q6PL18 1390 aa14.37□□□□□ -0.11
TRAPPC9-212ENST00000521944 ZFYVE9O95405 1425 aa14.37□□□□□ -0.11
TRAPPC9-212ENST00000521944 NOS1P29475 1434 aa14.36□□□□□ -0.11
TRAPPC9-212ENST00000521944 BCANQ96GW7 911 aa14.36□□□□□ -0.11
TRAPPC9-212ENST00000521944 TBX22Q9Y458 520 aa14.36□□□□□ -0.11
TRAPPC9-212ENST00000521944 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
TRAPPC9-212ENST00000521944 PLEKHG1Q9ULL1 1385 aa14.35□□□□□ -0.11
TRAPPC9-212ENST00000521944 ATF3P18847 181 aa14.35□□□□□ -0.11
TRAPPC9-212ENST00000521944 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
TRAPPC9-212ENST00000521944 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-212ENST00000521944 ADGRB3O60242 1522 aa14.33□□□□□ -0.12
TRAPPC9-212ENST00000521944 PNPLA6Q8IY17 1366 aa14.33□□□□□ -0.12
TRAPPC9-212ENST00000521944 ADAMTS13Q76LX8 1427 aa14.32□□□□□ -0.12
TRAPPC9-212ENST00000521944 NGLY1Q96IV0 654 aa14.32□□□□□ -0.12
TRAPPC9-212ENST00000521944 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
TRAPPC9-212ENST00000521944 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC9-212ENST00000521944 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-212ENST00000521944 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
TRAPPC9-212ENST00000521944 KIF15Q9NS87 1388 aa14.31□□□□□ -0.12
TRAPPC9-212ENST00000521944 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
TRAPPC9-212ENST00000521944 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
TRAPPC9-212ENST00000521944 LMTK2Q8IWU2 1503 aa14.3□□□□□ -0.12
TRAPPC9-212ENST00000521944 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
TRAPPC9-212ENST00000521944 ERBINQ96RT1 1412 aa14.29□□□□□ -0.12
TRAPPC9-212ENST00000521944 RIMS2Q9UQ26 1411 aa14.29□□□□□ -0.12
TRAPPC9-212ENST00000521944 MST1RQ04912 1400 aa14.28□□□□□ -0.12
TRAPPC9-212ENST00000521944 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
TRAPPC9-212ENST00000521944 CCDC125Q86Z20 511 aa14.28□□□□□ -0.12
TRAPPC9-212ENST00000521944 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-212ENST00000521944 USP21Q9UK80 565 aa14.27□□□□□ -0.13
TRAPPC9-212ENST00000521944 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.13
TRAPPC9-212ENST00000521944 TRPC5Q9UL62 973 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-212ENST00000521944 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
TRAPPC9-212ENST00000521944 ATRNO75882 1429 aa14.25□□□□□ -0.13
TRAPPC9-212ENST00000521944 PPP1R15AO75807 674 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-212ENST00000521944 ABCC5O15440 1437 aa14.24□□□□□ -0.13
TRAPPC9-212ENST00000521944 DCCP43146 1447 aa14.24□□□□□ -0.13
TRAPPC9-212ENST00000521944 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms