RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
VPS13B-210ENST00000521932 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
VPS13B-210ENST00000521932 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
VPS13B-210ENST00000521932 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
VPS13B-210ENST00000521932 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.36
VPS13B-210ENST00000521932 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
VPS13B-210ENST00000521932 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
VPS13B-210ENST00000521932 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
VPS13B-210ENST00000521932 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
VPS13B-210ENST00000521932 KDM5CP41229 1560 aa12.76□□□□□ -0.37
VPS13B-210ENST00000521932 FRMPD1Q5SYB0 1578 aa12.76□□□□□ -0.37
VPS13B-210ENST00000521932 POTEMA6NI47 508 aa12.75□□□□□ -0.37
VPS13B-210ENST00000521932 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
VPS13B-210ENST00000521932 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
VPS13B-210ENST00000521932 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
VPS13B-210ENST00000521932 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
VPS13B-210ENST00000521932 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
VPS13B-210ENST00000521932 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
VPS13B-210ENST00000521932 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
VPS13B-210ENST00000521932 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
VPS13B-210ENST00000521932 CCDC141Q6ZP82 1450 aa12.73□□□□□ -0.37
VPS13B-210ENST00000521932 RTEL1-TNFRSF6BF6WH68 1400 aa12.73□□□□□ -0.37
VPS13B-210ENST00000521932 ABCC5O15440 1437 aa12.72□□□□□ -0.37
VPS13B-210ENST00000521932 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
VPS13B-210ENST00000521932 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
VPS13B-210ENST00000521932 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
VPS13B-210ENST00000521932 NLRP6P59044 892 aa12.71□□□□□ -0.37
VPS13B-210ENST00000521932 DAPK1P53355 1430 aa12.71□□□□□ -0.38
VPS13B-210ENST00000521932 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
VPS13B-210ENST00000521932 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
VPS13B-210ENST00000521932 YEATS2Q9ULM3 1422 aa12.69□□□□□ -0.38
VPS13B-210ENST00000521932 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
VPS13B-210ENST00000521932 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
VPS13B-210ENST00000521932 KIDINS220Q9ULH0 1771 aa12.68□□□□□ -0.38
VPS13B-210ENST00000521932 MAST1Q9Y2H9 1570 aa12.68□□□□□ -0.38
VPS13B-210ENST00000521932 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 PTPRKQ15262 1439 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 INO80Q9ULG1 1556 aaPredicted RBP12.67□□□□□ -0.38
VPS13B-210ENST00000521932 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
VPS13B-210ENST00000521932 ATP10AO60312 1499 aa12.66□□□□□ -0.38
VPS13B-210ENST00000521932 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
VPS13B-210ENST00000521932 G3V3G9 751 aa12.65□□□□□ -0.38
VPS13B-210ENST00000521932 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 ST18O60284 1047 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
VPS13B-210ENST00000521932 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
VPS13B-210ENST00000521932 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
VPS13B-210ENST00000521932 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
VPS13B-210ENST00000521932 ABCA6Q8N139 1617 aa12.62□□□□□ -0.39
VPS13B-210ENST00000521932 ITGAEP38570 1179 aa12.62□□□□□ -0.39
VPS13B-210ENST00000521932 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
VPS13B-210ENST00000521932 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
VPS13B-210ENST00000521932 RRP7BPQ9NSQ0 103 aa12.62□□□□□ -0.39
VPS13B-210ENST00000521932 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
VPS13B-210ENST00000521932 A2MP01023 1474 aa12.61□□□□□ -0.39
VPS13B-210ENST00000521932 PPP1R37O75864 691 aa12.61□□□□□ -0.39
VPS13B-210ENST00000521932 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
VPS13B-210ENST00000521932 AGLP35573 1532 aa12.59□□□□□ -0.39
VPS13B-210ENST00000521932 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
VPS13B-210ENST00000521932 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
VPS13B-210ENST00000521932 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
VPS13B-210ENST00000521932 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
VPS13B-210ENST00000521932 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
VPS13B-210ENST00000521932 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
VPS13B-210ENST00000521932 ARID4BQ4LE39 1312 aaPredicted RBP12.56□□□□□ -0.4
VPS13B-210ENST00000521932 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 NAIPQ13075 1403 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 KIF3BO15066 747 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 SNPHO15079 494 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
VPS13B-210ENST00000521932 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.4
VPS13B-210ENST00000521932 GGT6Q6P531 493 aa12.51□□□□□ -0.41
VPS13B-210ENST00000521932 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
VPS13B-210ENST00000521932 MLECQ14165 292 aa12.5□□□□□ -0.41
VPS13B-210ENST00000521932 HRCP23327 699 aa12.49□□□□□ -0.41
VPS13B-210ENST00000521932 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
VPS13B-210ENST00000521932 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
VPS13B-210ENST00000521932 KIF3CO14782 793 aa12.48□□□□□ -0.41
VPS13B-210ENST00000521932 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
VPS13B-210ENST00000521932 SETD5Q9C0A6 1442 aa12.47□□□□□ -0.41
VPS13B-210ENST00000521932 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
VPS13B-210ENST00000521932 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
VPS13B-210ENST00000521932 GCC2Q8IWJ2 1684 aa12.47□□□□□ -0.41
VPS13B-210ENST00000521932 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
VPS13B-210ENST00000521932 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.41
VPS13B-210ENST00000521932 FAM135AQ9P2D6 1515 aa12.46□□□□□ -0.42
VPS13B-210ENST00000521932 MROH1Q8NDA8 1641 aa12.45□□□□□ -0.42
VPS13B-210ENST00000521932 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
VPS13B-210ENST00000521932 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
VPS13B-210ENST00000521932 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
VPS13B-210ENST00000521932 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms